Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:9107:9106
Extra
PDB:
ATOM 1 O3' C A 106 52.318 49.157 130.610 1.00 79.62 O
ATOM 2 P C A 107 52.257 47.593 130.243 1.00 80.63 P
ATOM 3 OP1 C A 107 52.956 46.879 131.343 1.00 81.22 O
ATOM 4 OP2 C A 107 52.691 47.371 128.836 1.00 79.16 O
ATOM 5 O5' C A 107 50.703 47.270 130.322 1.00 78.28 O
ATOM 6 C5' C A 107 49.985 47.431 131.552 1.00 76.48 C
ATOM 7 C4' C A 107 48.542 47.059 131.355 1.00 76.26 C
ATOM 8 O4' C A 107 47.872 48.073 130.559 1.00 75.32 O
ATOM 9 C3' C A 107 48.323 45.792 130.552 1.00 76.42 C
ATOM 10 O3' C A 107 48.551 44.603 131.281 1.00 76.99 O
ATOM 11 C2' C A 107 46.893 45.966 130.066 1.00 75.65 C
ATOM 12 O2' C A 107 45.915 45.687 131.048 1.00 74.30 O
ATOM 13 C1' C A 107 46.892 47.457 129.731 1.00 75.24 C
ATOM 14 N1 C A 107 47.253 47.682 128.319 1.00 74.49 N
ATOM 15 C2 C A 107 46.227 47.788 127.371 1.00 74.55 C
ATOM 16 O2 C A 107 45.046 47.701 127.746 1.00 74.40 O
ATOM 17 N3 C A 107 46.546 47.981 126.071 1.00 74.19 N
ATOM 18 C4 C A 107 47.824 48.065 125.703 1.00 73.96 C
ATOM 19 N4 C A 107 48.087 48.249 124.410 1.00 74.10 N
ATOM 20 C5 C A 107 48.889 47.963 126.646 1.00 74.61 C
ATOM 21 C6 C A 107 48.562 47.776 127.930 1.00 74.17 C
ATOM 22 P G A 108 48.981 43.275 130.490 1.00 78.27 P
ATOM 23 OP1 G A 108 49.266 42.235 131.505 1.00 79.55 O
ATOM 24 OP2 G A 108 50.029 43.638 129.499 1.00 79.23 O
ATOM 25 O5' G A 108 47.654 42.865 129.708 1.00 77.86 O
TER
ATOM 1 O3' U B 105 55.272 52.816 126.933 1.00 71.39 O
ATOM 2 P C B 106 54.985 51.238 126.990 1.00 72.01 P
ATOM 3 OP1 C B 106 56.137 50.632 127.705 1.00 71.33 O
ATOM 4 OP2 C B 106 54.630 50.754 125.635 1.00 70.80 O
ATOM 5 O5' C B 106 53.683 51.148 127.900 1.00 71.82 O
ATOM 6 C5' C B 106 53.679 51.707 129.226 1.00 74.19 C
ATOM 7 C4' C B 106 52.334 51.496 129.881 1.00 76.77 C
ATOM 8 O4' C B 106 51.336 52.373 129.293 1.00 76.40 O
ATOM 9 C3' C B 106 51.732 50.110 129.727 1.00 78.30 C
ATOM 10 O3' C B 106 52.318 49.157 130.610 1.00 79.62 O
ATOM 11 C2' C B 106 50.258 50.374 130.007 1.00 77.21 C
ATOM 12 O2' C B 106 49.975 50.486 131.387 1.00 76.95 O
ATOM 13 C1' C B 106 50.067 51.736 129.331 1.00 75.80 C
ATOM 14 N1 C B 106 49.544 51.627 127.955 1.00 75.57 N
ATOM 15 C2 C B 106 48.156 51.621 127.765 1.00 75.45 C
ATOM 16 O2 C B 106 47.412 51.707 128.756 1.00 76.51 O
ATOM 17 N3 C B 106 47.659 51.519 126.508 1.00 74.53 N
ATOM 18 C4 C B 106 48.489 51.423 125.468 1.00 73.77 C
ATOM 19 N4 C B 106 47.953 51.320 124.249 1.00 72.92 N
ATOM 20 C5 C B 106 49.905 51.426 125.631 1.00 73.91 C
ATOM 21 C6 C B 106 50.386 51.529 126.879 1.00 75.08 C
ATOM 22 P C B 107 52.257 47.593 130.243 1.00 80.63 P
ATOM 23 OP1 C B 107 52.956 46.879 131.343 1.00 81.22 O
ATOM 24 OP2 C B 107 52.691 47.371 128.836 1.00 79.16 O
ATOM 25 O5' C B 107 50.703 47.270 130.322 1.00 78.28 O
TER
ATOM 2 P C A 107 52.257 47.593 130.243 1.00 80.63 P
ATOM 3 OP1 C A 107 52.956 46.879 131.343 1.00 81.22 O
ATOM 4 OP2 C A 107 52.691 47.371 128.836 1.00 79.16 O
ATOM 5 O5' C A 107 50.703 47.270 130.322 1.00 78.28 O
ATOM 6 C5' C A 107 49.985 47.431 131.552 1.00 76.48 C
ATOM 7 C4' C A 107 48.542 47.059 131.355 1.00 76.26 C
ATOM 8 O4' C A 107 47.872 48.073 130.559 1.00 75.32 O
ATOM 9 C3' C A 107 48.323 45.792 130.552 1.00 76.42 C
ATOM 10 O3' C A 107 48.551 44.603 131.281 1.00 76.99 O
ATOM 11 C2' C A 107 46.893 45.966 130.066 1.00 75.65 C
ATOM 12 O2' C A 107 45.915 45.687 131.048 1.00 74.30 O
ATOM 13 C1' C A 107 46.892 47.457 129.731 1.00 75.24 C
ATOM 14 N1 C A 107 47.253 47.682 128.319 1.00 74.49 N
ATOM 15 C2 C A 107 46.227 47.788 127.371 1.00 74.55 C
ATOM 16 O2 C A 107 45.046 47.701 127.746 1.00 74.40 O
ATOM 17 N3 C A 107 46.546 47.981 126.071 1.00 74.19 N
ATOM 18 C4 C A 107 47.824 48.065 125.703 1.00 73.96 C
ATOM 19 N4 C A 107 48.087 48.249 124.410 1.00 74.10 N
ATOM 20 C5 C A 107 48.889 47.963 126.646 1.00 74.61 C
ATOM 21 C6 C A 107 48.562 47.776 127.930 1.00 74.17 C
ATOM 22 P G A 108 48.981 43.275 130.490 1.00 78.27 P
ATOM 23 OP1 G A 108 49.266 42.235 131.505 1.00 79.55 O
ATOM 24 OP2 G A 108 50.029 43.638 129.499 1.00 79.23 O
ATOM 25 O5' G A 108 47.654 42.865 129.708 1.00 77.86 O
TER
ATOM 1 O3' U B 105 55.272 52.816 126.933 1.00 71.39 O
ATOM 2 P C B 106 54.985 51.238 126.990 1.00 72.01 P
ATOM 3 OP1 C B 106 56.137 50.632 127.705 1.00 71.33 O
ATOM 4 OP2 C B 106 54.630 50.754 125.635 1.00 70.80 O
ATOM 5 O5' C B 106 53.683 51.148 127.900 1.00 71.82 O
ATOM 6 C5' C B 106 53.679 51.707 129.226 1.00 74.19 C
ATOM 7 C4' C B 106 52.334 51.496 129.881 1.00 76.77 C
ATOM 8 O4' C B 106 51.336 52.373 129.293 1.00 76.40 O
ATOM 9 C3' C B 106 51.732 50.110 129.727 1.00 78.30 C
ATOM 10 O3' C B 106 52.318 49.157 130.610 1.00 79.62 O
ATOM 11 C2' C B 106 50.258 50.374 130.007 1.00 77.21 C
ATOM 12 O2' C B 106 49.975 50.486 131.387 1.00 76.95 O
ATOM 13 C1' C B 106 50.067 51.736 129.331 1.00 75.80 C
ATOM 14 N1 C B 106 49.544 51.627 127.955 1.00 75.57 N
ATOM 15 C2 C B 106 48.156 51.621 127.765 1.00 75.45 C
ATOM 16 O2 C B 106 47.412 51.707 128.756 1.00 76.51 O
ATOM 17 N3 C B 106 47.659 51.519 126.508 1.00 74.53 N
ATOM 18 C4 C B 106 48.489 51.423 125.468 1.00 73.77 C
ATOM 19 N4 C B 106 47.953 51.320 124.249 1.00 72.92 N
ATOM 20 C5 C B 106 49.905 51.426 125.631 1.00 73.91 C
ATOM 21 C6 C B 106 50.386 51.529 126.879 1.00 75.08 C
ATOM 22 P C B 107 52.257 47.593 130.243 1.00 80.63 P
ATOM 23 OP1 C B 107 52.956 46.879 131.343 1.00 81.22 O
ATOM 24 OP2 C B 107 52.691 47.371 128.836 1.00 79.16 O
ATOM 25 O5' C B 107 50.703 47.270 130.322 1.00 78.28 O
TER
Atoms:
C2: (46.227,47.788,127.371)
OP1: (52.956,46.879,131.343)
OP2: (52.691,47.371,128.836)
C4: (47.824,48.065,125.703)
O5': (50.703,47.270,130.322)
C3': (48.323,45.792,130.552)
C1': (46.892,47.457,129.731)
O4': (47.872,48.073,130.559)
C5': (49.985,47.431,131.552)
P: (52.257,47.593,130.243)
O2: (45.046,47.701,127.746)
C4': (48.542,47.059,131.355)
C2': (46.893,45.966,130.066)
O2': (45.915,45.687,131.048)
N1: (47.253,47.682,128.319)
N3: (46.546,47.981,126.071)
N4: (48.087,48.249,124.410)
C6: (48.562,47.776,127.930)
C5: (48.889,47.963,126.646)
O3': (48.551,44.603,131.281)
OP1: (52.956,46.879,131.343)
OP2: (52.691,47.371,128.836)
C4: (47.824,48.065,125.703)
O5': (50.703,47.270,130.322)
C3': (48.323,45.792,130.552)
C1': (46.892,47.457,129.731)
O4': (47.872,48.073,130.559)
C5': (49.985,47.431,131.552)
P: (52.257,47.593,130.243)
O2: (45.046,47.701,127.746)
C4': (48.542,47.059,131.355)
C2': (46.893,45.966,130.066)
O2': (45.915,45.687,131.048)
N1: (47.253,47.682,128.319)
N3: (46.546,47.981,126.071)
N4: (48.087,48.249,124.410)
C6: (48.562,47.776,127.930)
C5: (48.889,47.963,126.646)
O3': (48.551,44.603,131.281)
C2: (48.156,51.621,127.765)
OP1: (56.137,50.632,127.705)
OP2: (54.630,50.754,125.635)
C4: (48.489,51.423,125.468)
O5': (53.683,51.148,127.900)
C3': (51.732,50.110,129.727)
C1': (50.067,51.736,129.331)
O4': (51.336,52.373,129.293)
C5': (53.679,51.707,129.226)
P: (54.985,51.238,126.990)
O2: (47.412,51.707,128.756)
C4': (52.334,51.496,129.881)
C2': (50.258,50.374,130.007)
O2': (49.975,50.486,131.387)
N1: (49.544,51.627,127.955)
N3: (47.659,51.519,126.508)
N4: (47.953,51.320,124.249)
C6: (50.386,51.529,126.879)
C5: (49.905,51.426,125.631)
O3': (52.318,49.157,130.610)
OP1: (56.137,50.632,127.705)
OP2: (54.630,50.754,125.635)
C4: (48.489,51.423,125.468)
O5': (53.683,51.148,127.900)
C3': (51.732,50.110,129.727)
C1': (50.067,51.736,129.331)
O4': (51.336,52.373,129.293)
C5': (53.679,51.707,129.226)
P: (54.985,51.238,126.990)
O2: (47.412,51.707,128.756)
C4': (52.334,51.496,129.881)
C2': (50.258,50.374,130.007)
O2': (49.975,50.486,131.387)
N1: (49.544,51.627,127.955)
N3: (47.659,51.519,126.508)
N4: (47.953,51.320,124.249)
C6: (50.386,51.529,126.879)
C5: (49.905,51.426,125.631)
O3': (52.318,49.157,130.610)
Image (generated by PyMOL):