Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2D2K:D8:D6
Extra
PDB:
ATOM 1 O3' A A 7 26.999 10.550 43.250 0.50 54.38 O
ATOM 2 P U A 8 25.457 10.346 42.823 0.50 57.15 P
ATOM 3 OP1 U A 8 25.028 9.053 43.419 0.50 59.81 O
ATOM 4 OP2 U A 8 25.384 10.535 41.353 0.50 57.56 O
ATOM 5 O5' U A 8 24.654 11.537 43.535 0.50 62.40 O
ATOM 6 C5' U A 8 23.620 12.300 42.876 0.50 62.74 C
ATOM 7 C4' U A 8 22.321 12.199 43.660 0.50 63.31 C
ATOM 8 O4' U A 8 21.840 10.850 43.524 0.50 68.02 O
ATOM 9 C3' U A 8 22.460 12.476 45.162 0.50 63.74 C
ATOM 10 O3' U A 8 21.736 13.645 45.609 0.50 60.91 O
ATOM 11 C2' U A 8 21.713 11.331 45.857 0.50 65.66 C
ATOM 12 O2' U A 8 20.669 11.791 46.675 0.50 67.98 O
ATOM 13 C1' U A 8 21.167 10.496 44.695 0.50 70.69 C
ATOM 14 N1 U A 8 21.161 9.036 44.828 0.50 75.84 N
ATOM 15 C2 U A 8 20.000 8.462 45.305 0.50 78.78 C
ATOM 16 O2 U A 8 19.026 9.119 45.640 0.50 79.44 O
ATOM 17 N3 U A 8 20.016 7.093 45.373 0.50 80.77 N
ATOM 18 C4 U A 8 21.055 6.258 45.022 0.50 80.88 C
ATOM 19 O4 U A 8 20.897 5.036 45.089 0.50 82.76 O
ATOM 20 C5 U A 8 22.231 6.933 44.555 0.50 79.50 C
ATOM 21 C6 U A 8 22.242 8.268 44.478 0.50 77.35 C
ATOM 22 P A A 9 22.024 15.112 45.003 1.00 60.75 P
ATOM 23 OP1 A A 9 20.792 15.914 45.199 1.00 62.19 O
ATOM 24 OP2 A A 9 22.605 15.016 43.647 1.00 61.45 O
ATOM 25 O5' A A 9 23.068 15.737 46.016 1.00 54.83 O
TER
ATOM 1 O3' G B 5 26.414 4.435 45.399 1.00 53.09 O
ATOM 2 P U B 6 24.889 4.477 45.875 0.50 57.07 P
ATOM 3 OP1 U B 6 24.720 3.499 46.979 0.50 56.63 O
ATOM 4 OP2 U B 6 24.045 4.373 44.653 0.50 55.21 O
ATOM 5 O5' U B 6 24.712 5.939 46.486 0.50 58.78 O
ATOM 6 C5' U B 6 24.316 6.125 47.846 0.50 57.83 C
ATOM 7 C4' U B 6 25.440 6.763 48.627 0.50 57.63 C
ATOM 8 O4' U B 6 26.563 5.870 48.676 0.50 57.64 O
ATOM 9 C3' U B 6 25.987 8.064 48.050 0.50 58.52 C
ATOM 10 O3' U B 6 25.372 9.137 48.765 0.50 59.50 O
ATOM 11 C2' U B 6 27.483 8.053 48.397 0.50 57.70 C
ATOM 12 O2' U B 6 27.860 9.019 49.352 0.50 57.64 O
ATOM 13 C1' U B 6 27.709 6.634 48.931 0.50 58.59 C
ATOM 14 N1 U B 6 28.895 5.914 48.460 0.50 60.79 N
ATOM 15 C2 U B 6 30.009 5.986 49.263 0.50 62.09 C
ATOM 16 O2 U B 6 30.022 6.604 50.314 0.50 62.59 O
ATOM 17 N3 U B 6 31.104 5.305 48.800 0.50 63.46 N
ATOM 18 C4 U B 6 31.191 4.568 47.637 0.50 63.60 C
ATOM 19 O4 U B 6 32.254 4.010 47.348 0.50 66.02 O
ATOM 20 C5 U B 6 29.987 4.537 46.862 0.50 62.09 C
ATOM 21 C6 U B 6 28.906 5.199 47.289 0.50 61.29 C
ATOM 22 P A B 7 24.622 10.319 47.983 0.50 59.69 P
ATOM 23 OP1 A B 7 24.273 11.360 48.980 0.50 57.81 O
ATOM 24 OP2 A B 7 23.550 9.720 47.148 0.50 56.87 O
ATOM 25 O5' A B 7 25.734 10.905 47.008 0.50 56.81 O
TER
ATOM 2 P U A 8 25.457 10.346 42.823 0.50 57.15 P
ATOM 3 OP1 U A 8 25.028 9.053 43.419 0.50 59.81 O
ATOM 4 OP2 U A 8 25.384 10.535 41.353 0.50 57.56 O
ATOM 5 O5' U A 8 24.654 11.537 43.535 0.50 62.40 O
ATOM 6 C5' U A 8 23.620 12.300 42.876 0.50 62.74 C
ATOM 7 C4' U A 8 22.321 12.199 43.660 0.50 63.31 C
ATOM 8 O4' U A 8 21.840 10.850 43.524 0.50 68.02 O
ATOM 9 C3' U A 8 22.460 12.476 45.162 0.50 63.74 C
ATOM 10 O3' U A 8 21.736 13.645 45.609 0.50 60.91 O
ATOM 11 C2' U A 8 21.713 11.331 45.857 0.50 65.66 C
ATOM 12 O2' U A 8 20.669 11.791 46.675 0.50 67.98 O
ATOM 13 C1' U A 8 21.167 10.496 44.695 0.50 70.69 C
ATOM 14 N1 U A 8 21.161 9.036 44.828 0.50 75.84 N
ATOM 15 C2 U A 8 20.000 8.462 45.305 0.50 78.78 C
ATOM 16 O2 U A 8 19.026 9.119 45.640 0.50 79.44 O
ATOM 17 N3 U A 8 20.016 7.093 45.373 0.50 80.77 N
ATOM 18 C4 U A 8 21.055 6.258 45.022 0.50 80.88 C
ATOM 19 O4 U A 8 20.897 5.036 45.089 0.50 82.76 O
ATOM 20 C5 U A 8 22.231 6.933 44.555 0.50 79.50 C
ATOM 21 C6 U A 8 22.242 8.268 44.478 0.50 77.35 C
ATOM 22 P A A 9 22.024 15.112 45.003 1.00 60.75 P
ATOM 23 OP1 A A 9 20.792 15.914 45.199 1.00 62.19 O
ATOM 24 OP2 A A 9 22.605 15.016 43.647 1.00 61.45 O
ATOM 25 O5' A A 9 23.068 15.737 46.016 1.00 54.83 O
TER
ATOM 1 O3' G B 5 26.414 4.435 45.399 1.00 53.09 O
ATOM 2 P U B 6 24.889 4.477 45.875 0.50 57.07 P
ATOM 3 OP1 U B 6 24.720 3.499 46.979 0.50 56.63 O
ATOM 4 OP2 U B 6 24.045 4.373 44.653 0.50 55.21 O
ATOM 5 O5' U B 6 24.712 5.939 46.486 0.50 58.78 O
ATOM 6 C5' U B 6 24.316 6.125 47.846 0.50 57.83 C
ATOM 7 C4' U B 6 25.440 6.763 48.627 0.50 57.63 C
ATOM 8 O4' U B 6 26.563 5.870 48.676 0.50 57.64 O
ATOM 9 C3' U B 6 25.987 8.064 48.050 0.50 58.52 C
ATOM 10 O3' U B 6 25.372 9.137 48.765 0.50 59.50 O
ATOM 11 C2' U B 6 27.483 8.053 48.397 0.50 57.70 C
ATOM 12 O2' U B 6 27.860 9.019 49.352 0.50 57.64 O
ATOM 13 C1' U B 6 27.709 6.634 48.931 0.50 58.59 C
ATOM 14 N1 U B 6 28.895 5.914 48.460 0.50 60.79 N
ATOM 15 C2 U B 6 30.009 5.986 49.263 0.50 62.09 C
ATOM 16 O2 U B 6 30.022 6.604 50.314 0.50 62.59 O
ATOM 17 N3 U B 6 31.104 5.305 48.800 0.50 63.46 N
ATOM 18 C4 U B 6 31.191 4.568 47.637 0.50 63.60 C
ATOM 19 O4 U B 6 32.254 4.010 47.348 0.50 66.02 O
ATOM 20 C5 U B 6 29.987 4.537 46.862 0.50 62.09 C
ATOM 21 C6 U B 6 28.906 5.199 47.289 0.50 61.29 C
ATOM 22 P A B 7 24.622 10.319 47.983 0.50 59.69 P
ATOM 23 OP1 A B 7 24.273 11.360 48.980 0.50 57.81 O
ATOM 24 OP2 A B 7 23.550 9.720 47.148 0.50 56.87 O
ATOM 25 O5' A B 7 25.734 10.905 47.008 0.50 56.81 O
TER
Atoms:
C4: (21.055,6.258,45.022)
N3: (20.016,7.093,45.373)
OP1: (25.028,9.053,43.419)
OP2: (25.384,10.535,41.353)
C2: (20.000,8.462,45.305)
C1': (21.167,10.496,44.695)
C3': (22.460,12.476,45.162)
O5': (24.654,11.537,43.535)
O4': (21.840,10.850,43.524)
C5': (23.620,12.300,42.876)
P: (25.457,10.346,42.823)
C4': (22.321,12.199,43.660)
C2': (21.713,11.331,45.857)
O2': (20.669,11.791,46.675)
N1: (21.161,9.036,44.828)
O4: (20.897,5.036,45.089)
O2: (19.026,9.119,45.640)
C6: (22.242,8.268,44.478)
C5: (22.231,6.933,44.555)
O3': (21.736,13.645,45.609)
N3: (20.016,7.093,45.373)
OP1: (25.028,9.053,43.419)
OP2: (25.384,10.535,41.353)
C2: (20.000,8.462,45.305)
C1': (21.167,10.496,44.695)
C3': (22.460,12.476,45.162)
O5': (24.654,11.537,43.535)
O4': (21.840,10.850,43.524)
C5': (23.620,12.300,42.876)
P: (25.457,10.346,42.823)
C4': (22.321,12.199,43.660)
C2': (21.713,11.331,45.857)
O2': (20.669,11.791,46.675)
N1: (21.161,9.036,44.828)
O4: (20.897,5.036,45.089)
O2: (19.026,9.119,45.640)
C6: (22.242,8.268,44.478)
C5: (22.231,6.933,44.555)
O3': (21.736,13.645,45.609)
C4: (31.191,4.568,47.637)
N3: (31.104,5.305,48.800)
OP1: (24.720,3.499,46.979)
OP2: (24.045,4.373,44.653)
C2: (30.009,5.986,49.263)
C1': (27.709,6.634,48.931)
C3': (25.987,8.064,48.050)
O5': (24.712,5.939,46.486)
O4': (26.563,5.870,48.676)
C5': (24.316,6.125,47.846)
P: (24.889,4.477,45.875)
C4': (25.440,6.763,48.627)
C2': (27.483,8.053,48.397)
O2': (27.860,9.019,49.352)
N1: (28.895,5.914,48.460)
O4: (32.254,4.010,47.348)
O2: (30.022,6.604,50.314)
C6: (28.906,5.199,47.289)
C5: (29.987,4.537,46.862)
O3': (25.372,9.137,48.765)
N3: (31.104,5.305,48.800)
OP1: (24.720,3.499,46.979)
OP2: (24.045,4.373,44.653)
C2: (30.009,5.986,49.263)
C1': (27.709,6.634,48.931)
C3': (25.987,8.064,48.050)
O5': (24.712,5.939,46.486)
O4': (26.563,5.870,48.676)
C5': (24.316,6.125,47.846)
P: (24.889,4.477,45.875)
C4': (25.440,6.763,48.627)
C2': (27.483,8.053,48.397)
O2': (27.860,9.019,49.352)
N1: (28.895,5.914,48.460)
O4: (32.254,4.010,47.348)
O2: (30.022,6.604,50.314)
C6: (28.906,5.199,47.289)
C5: (29.987,4.537,46.862)
O3': (25.372,9.137,48.765)
Image (generated by PyMOL):