Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQM:0279:0278
Extra
PDB:
ATOM 1 O3' C A 278 60.629 127.736 -1.891 1.00 97.86 O
ATOM 2 P C A 279 59.491 128.198 -0.851 1.00 96.55 P
ATOM 3 OP1 C A 279 59.232 129.641 -1.089 1.00 96.49 O
ATOM 4 OP2 C A 279 59.887 127.743 0.506 1.00 96.85 O
ATOM 5 O5' C A 279 58.202 127.374 -1.300 1.00 94.71 O
ATOM 6 C5' C A 279 57.596 127.595 -2.588 1.00 92.11 C
ATOM 7 C4' C A 279 56.387 126.704 -2.763 1.00 90.58 C
ATOM 8 O4' C A 279 56.796 125.312 -2.771 1.00 89.65 O
ATOM 9 C3' C A 279 55.334 126.784 -1.668 1.00 89.44 C
ATOM 10 O3' C A 279 54.454 127.885 -1.888 1.00 89.59 O
ATOM 11 C2' C A 279 54.617 125.445 -1.809 1.00 89.25 C
ATOM 12 O2' C A 279 53.653 125.439 -2.843 1.00 87.22 O
ATOM 13 C1' C A 279 55.774 124.515 -2.192 1.00 89.32 C
ATOM 14 N1 C A 279 56.349 123.742 -1.073 1.00 89.52 N
ATOM 15 C2 C A 279 55.668 122.596 -0.613 1.00 89.47 C
ATOM 16 O2 C A 279 54.580 122.287 -1.130 1.00 89.19 O
ATOM 17 N3 C A 279 56.213 121.862 0.386 1.00 89.79 N
ATOM 18 C4 C A 279 57.377 122.231 0.930 1.00 90.29 C
ATOM 19 N4 C A 279 57.883 121.469 1.905 1.00 90.28 N
ATOM 20 C5 C A 279 58.077 123.398 0.497 1.00 90.12 C
ATOM 21 C6 C A 279 57.532 124.116 -0.495 1.00 90.10 C
ATOM 22 P G A 280 53.882 128.720 -0.638 1.00 89.21 P
ATOM 23 OP1 G A 280 52.975 129.768 -1.176 1.00 88.55 O
ATOM 24 OP2 G A 280 55.032 129.112 0.218 1.00 88.82 O
ATOM 25 O5' G A 280 52.990 127.666 0.159 1.00 90.06 O
TER
ATOM 1 O3' G B 277 65.617 125.089 0.484 1.00104.98 O
ATOM 2 P C B 278 64.153 125.512 1.002 1.00106.07 P
ATOM 3 OP1 C B 278 64.229 126.931 1.447 1.00106.03 O
ATOM 4 OP2 C B 278 63.669 124.467 1.950 1.00105.26 O
ATOM 5 O5' C B 278 63.248 125.450 -0.309 1.00104.46 O
ATOM 6 C5' C B 278 63.502 126.329 -1.425 1.00101.84 C
ATOM 7 C4' C B 278 62.421 126.180 -2.469 1.00 99.87 C
ATOM 8 O4' C B 278 62.442 124.828 -3.001 1.00 99.50 O
ATOM 9 C3' C B 278 60.996 126.361 -1.973 1.00 99.06 C
ATOM 10 O3' C B 278 60.629 127.736 -1.891 1.00 97.86 O
ATOM 11 C2' C B 278 60.194 125.607 -3.026 1.00 99.28 C
ATOM 12 O2' C B 278 60.028 126.352 -4.217 1.00 98.76 O
ATOM 13 C1' C B 278 61.115 124.414 -3.301 1.00 98.90 C
ATOM 14 N1 C B 278 60.791 123.217 -2.492 1.00 98.22 N
ATOM 15 C2 C B 278 59.746 122.373 -2.913 1.00 97.84 C
ATOM 16 O2 C B 278 59.118 122.655 -3.946 1.00 98.01 O
ATOM 17 N3 C B 278 59.447 121.275 -2.180 1.00 97.47 N
ATOM 18 C4 C B 278 60.140 121.002 -1.072 1.00 96.73 C
ATOM 19 N4 C B 278 59.809 119.906 -0.385 1.00 96.14 N
ATOM 20 C5 C B 278 61.202 121.840 -0.620 1.00 96.36 C
ATOM 21 C6 C B 278 61.491 122.925 -1.351 1.00 97.30 C
ATOM 22 P C B 279 59.491 128.198 -0.851 1.00 96.55 P
ATOM 23 OP1 C B 279 59.232 129.641 -1.089 1.00 96.49 O
ATOM 24 OP2 C B 279 59.887 127.743 0.506 1.00 96.85 O
ATOM 25 O5' C B 279 58.202 127.374 -1.300 1.00 94.71 O
TER
ATOM 2 P C A 279 59.491 128.198 -0.851 1.00 96.55 P
ATOM 3 OP1 C A 279 59.232 129.641 -1.089 1.00 96.49 O
ATOM 4 OP2 C A 279 59.887 127.743 0.506 1.00 96.85 O
ATOM 5 O5' C A 279 58.202 127.374 -1.300 1.00 94.71 O
ATOM 6 C5' C A 279 57.596 127.595 -2.588 1.00 92.11 C
ATOM 7 C4' C A 279 56.387 126.704 -2.763 1.00 90.58 C
ATOM 8 O4' C A 279 56.796 125.312 -2.771 1.00 89.65 O
ATOM 9 C3' C A 279 55.334 126.784 -1.668 1.00 89.44 C
ATOM 10 O3' C A 279 54.454 127.885 -1.888 1.00 89.59 O
ATOM 11 C2' C A 279 54.617 125.445 -1.809 1.00 89.25 C
ATOM 12 O2' C A 279 53.653 125.439 -2.843 1.00 87.22 O
ATOM 13 C1' C A 279 55.774 124.515 -2.192 1.00 89.32 C
ATOM 14 N1 C A 279 56.349 123.742 -1.073 1.00 89.52 N
ATOM 15 C2 C A 279 55.668 122.596 -0.613 1.00 89.47 C
ATOM 16 O2 C A 279 54.580 122.287 -1.130 1.00 89.19 O
ATOM 17 N3 C A 279 56.213 121.862 0.386 1.00 89.79 N
ATOM 18 C4 C A 279 57.377 122.231 0.930 1.00 90.29 C
ATOM 19 N4 C A 279 57.883 121.469 1.905 1.00 90.28 N
ATOM 20 C5 C A 279 58.077 123.398 0.497 1.00 90.12 C
ATOM 21 C6 C A 279 57.532 124.116 -0.495 1.00 90.10 C
ATOM 22 P G A 280 53.882 128.720 -0.638 1.00 89.21 P
ATOM 23 OP1 G A 280 52.975 129.768 -1.176 1.00 88.55 O
ATOM 24 OP2 G A 280 55.032 129.112 0.218 1.00 88.82 O
ATOM 25 O5' G A 280 52.990 127.666 0.159 1.00 90.06 O
TER
ATOM 1 O3' G B 277 65.617 125.089 0.484 1.00104.98 O
ATOM 2 P C B 278 64.153 125.512 1.002 1.00106.07 P
ATOM 3 OP1 C B 278 64.229 126.931 1.447 1.00106.03 O
ATOM 4 OP2 C B 278 63.669 124.467 1.950 1.00105.26 O
ATOM 5 O5' C B 278 63.248 125.450 -0.309 1.00104.46 O
ATOM 6 C5' C B 278 63.502 126.329 -1.425 1.00101.84 C
ATOM 7 C4' C B 278 62.421 126.180 -2.469 1.00 99.87 C
ATOM 8 O4' C B 278 62.442 124.828 -3.001 1.00 99.50 O
ATOM 9 C3' C B 278 60.996 126.361 -1.973 1.00 99.06 C
ATOM 10 O3' C B 278 60.629 127.736 -1.891 1.00 97.86 O
ATOM 11 C2' C B 278 60.194 125.607 -3.026 1.00 99.28 C
ATOM 12 O2' C B 278 60.028 126.352 -4.217 1.00 98.76 O
ATOM 13 C1' C B 278 61.115 124.414 -3.301 1.00 98.90 C
ATOM 14 N1 C B 278 60.791 123.217 -2.492 1.00 98.22 N
ATOM 15 C2 C B 278 59.746 122.373 -2.913 1.00 97.84 C
ATOM 16 O2 C B 278 59.118 122.655 -3.946 1.00 98.01 O
ATOM 17 N3 C B 278 59.447 121.275 -2.180 1.00 97.47 N
ATOM 18 C4 C B 278 60.140 121.002 -1.072 1.00 96.73 C
ATOM 19 N4 C B 278 59.809 119.906 -0.385 1.00 96.14 N
ATOM 20 C5 C B 278 61.202 121.840 -0.620 1.00 96.36 C
ATOM 21 C6 C B 278 61.491 122.925 -1.351 1.00 97.30 C
ATOM 22 P C B 279 59.491 128.198 -0.851 1.00 96.55 P
ATOM 23 OP1 C B 279 59.232 129.641 -1.089 1.00 96.49 O
ATOM 24 OP2 C B 279 59.887 127.743 0.506 1.00 96.85 O
ATOM 25 O5' C B 279 58.202 127.374 -1.300 1.00 94.71 O
TER
Atoms:
C2: (55.668,122.596,-0.613)
OP1: (59.232,129.641,-1.089)
OP2: (59.887,127.743,0.506)
C4: (57.377,122.231,0.930)
O5': (58.202,127.374,-1.300)
C3': (55.334,126.784,-1.668)
C1': (55.774,124.515,-2.192)
O4': (56.796,125.312,-2.771)
C5': (57.596,127.595,-2.588)
P: (59.491,128.198,-0.851)
O2: (54.580,122.287,-1.130)
C4': (56.387,126.704,-2.763)
C2': (54.617,125.445,-1.809)
O2': (53.653,125.439,-2.843)
N1: (56.349,123.742,-1.073)
N3: (56.213,121.862,0.386)
N4: (57.883,121.469,1.905)
C6: (57.532,124.116,-0.495)
C5: (58.077,123.398,0.497)
O3': (54.454,127.885,-1.888)
OP1: (59.232,129.641,-1.089)
OP2: (59.887,127.743,0.506)
C4: (57.377,122.231,0.930)
O5': (58.202,127.374,-1.300)
C3': (55.334,126.784,-1.668)
C1': (55.774,124.515,-2.192)
O4': (56.796,125.312,-2.771)
C5': (57.596,127.595,-2.588)
P: (59.491,128.198,-0.851)
O2: (54.580,122.287,-1.130)
C4': (56.387,126.704,-2.763)
C2': (54.617,125.445,-1.809)
O2': (53.653,125.439,-2.843)
N1: (56.349,123.742,-1.073)
N3: (56.213,121.862,0.386)
N4: (57.883,121.469,1.905)
C6: (57.532,124.116,-0.495)
C5: (58.077,123.398,0.497)
O3': (54.454,127.885,-1.888)
C2: (59.746,122.373,-2.913)
OP1: (64.229,126.931,1.447)
OP2: (63.669,124.467,1.950)
C4: (60.140,121.002,-1.072)
O5': (63.248,125.450,-0.309)
C3': (60.996,126.361,-1.973)
C1': (61.115,124.414,-3.301)
O4': (62.442,124.828,-3.001)
C5': (63.502,126.329,-1.425)
P: (64.153,125.512,1.002)
O2: (59.118,122.655,-3.946)
C4': (62.421,126.180,-2.469)
C2': (60.194,125.607,-3.026)
O2': (60.028,126.352,-4.217)
N1: (60.791,123.217,-2.492)
N3: (59.447,121.275,-2.180)
N4: (59.809,119.906,-0.385)
C6: (61.491,122.925,-1.351)
C5: (61.202,121.840,-0.620)
O3': (60.629,127.736,-1.891)
OP1: (64.229,126.931,1.447)
OP2: (63.669,124.467,1.950)
C4: (60.140,121.002,-1.072)
O5': (63.248,125.450,-0.309)
C3': (60.996,126.361,-1.973)
C1': (61.115,124.414,-3.301)
O4': (62.442,124.828,-3.001)
C5': (63.502,126.329,-1.425)
P: (64.153,125.512,1.002)
O2: (59.118,122.655,-3.946)
C4': (62.421,126.180,-2.469)
C2': (60.194,125.607,-3.026)
O2': (60.028,126.352,-4.217)
N1: (60.791,123.217,-2.492)
N3: (59.447,121.275,-2.180)
N4: (59.809,119.906,-0.385)
C6: (61.491,122.925,-1.351)
C5: (61.202,121.840,-0.620)
O3': (60.629,127.736,-1.891)
Image (generated by PyMOL):