Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2DR9:B18:B17
Extra
PDB:
ATOM 1 O3' U A 17 -9.445 7.416 -17.796 1.00 68.38 O
ATOM 2 P U A 18 -9.694 5.941 -17.169 1.00 65.59 P
ATOM 3 OP1 U A 18 -9.408 4.919 -18.212 1.00 64.84 O
ATOM 4 OP2 U A 18 -11.020 5.950 -16.512 1.00 65.82 O
ATOM 5 O5' U A 18 -8.590 5.772 -16.041 1.00 64.32 O
ATOM 6 C5' U A 18 -7.433 4.997 -16.294 1.00 64.11 C
ATOM 7 C4' U A 18 -6.704 4.723 -15.012 1.00 64.37 C
ATOM 8 O4' U A 18 -6.373 5.979 -14.377 1.00 64.92 O
ATOM 9 C3' U A 18 -7.472 3.942 -13.960 1.00 63.44 C
ATOM 10 O3' U A 18 -7.425 2.565 -14.383 1.00 61.36 O
ATOM 11 C2' U A 18 -6.753 4.356 -12.674 1.00 64.79 C
ATOM 12 O2' U A 18 -5.529 3.683 -12.457 1.00 68.37 O
ATOM 13 C1' U A 18 -6.389 5.814 -12.976 1.00 65.55 C
ATOM 14 N1 U A 18 -7.263 6.844 -12.403 1.00 66.69 N
ATOM 15 C2 U A 18 -7.274 6.981 -11.034 1.00 67.35 C
ATOM 16 O2 U A 18 -6.604 6.278 -10.296 1.00 67.25 O
ATOM 17 N3 U A 18 -8.097 7.972 -10.558 1.00 68.24 N
ATOM 18 C4 U A 18 -8.893 8.820 -11.301 1.00 68.41 C
ATOM 19 O4 U A 18 -9.607 9.641 -10.722 1.00 69.38 O
ATOM 20 C5 U A 18 -8.825 8.615 -12.716 1.00 67.64 C
ATOM 21 C6 U A 18 -8.035 7.656 -13.206 1.00 67.08 C
ATOM 22 P C A 19 -7.053 1.369 -13.363 1.00 57.37 P
ATOM 23 OP1 C A 19 -6.767 1.836 -11.987 1.00 60.65 O
ATOM 24 OP2 C A 19 -6.059 0.525 -14.070 1.00 56.18 O
ATOM 25 O5' C A 19 -8.384 0.510 -13.270 1.00 54.99 O
TER
ATOM 1 O3' A B 16 -12.808 10.292 -15.780 1.00 62.82 O
ATOM 2 P U B 17 -11.448 11.159 -15.965 1.00 64.01 P
ATOM 3 OP1 U B 17 -10.672 11.158 -14.699 1.00 64.71 O
ATOM 4 OP2 U B 17 -11.829 12.461 -16.571 1.00 63.30 O
ATOM 5 O5' U B 17 -10.589 10.370 -17.048 1.00 64.49 O
ATOM 6 C5' U B 17 -9.241 10.744 -17.270 1.00 66.75 C
ATOM 7 C4' U B 17 -8.471 9.646 -17.965 1.00 69.40 C
ATOM 8 O4' U B 17 -7.093 10.105 -18.031 1.00 71.15 O
ATOM 9 C3' U B 17 -8.427 8.283 -17.265 1.00 69.89 C
ATOM 10 O3' U B 17 -9.445 7.416 -17.796 1.00 68.38 O
ATOM 11 C2' U B 17 -7.019 7.793 -17.594 1.00 71.30 C
ATOM 12 O2' U B 17 -6.902 7.217 -18.881 1.00 71.20 O
ATOM 13 C1' U B 17 -6.229 9.101 -17.542 1.00 72.26 C
ATOM 14 N1 U B 17 -5.830 9.487 -16.182 1.00 73.24 N
ATOM 15 C2 U B 17 -5.069 8.592 -15.462 1.00 74.07 C
ATOM 16 O2 U B 17 -4.694 7.522 -15.924 1.00 73.64 O
ATOM 17 N3 U B 17 -4.760 8.993 -14.183 1.00 73.91 N
ATOM 18 C4 U B 17 -5.121 10.177 -13.572 1.00 73.19 C
ATOM 19 O4 U B 17 -4.821 10.365 -12.392 1.00 72.74 O
ATOM 20 C5 U B 17 -5.889 11.061 -14.393 1.00 73.50 C
ATOM 21 C6 U B 17 -6.209 10.695 -15.639 1.00 73.38 C
ATOM 22 P U B 18 -9.694 5.941 -17.169 1.00 65.59 P
ATOM 23 OP1 U B 18 -9.408 4.919 -18.212 1.00 64.84 O
ATOM 24 OP2 U B 18 -11.020 5.950 -16.512 1.00 65.82 O
ATOM 25 O5' U B 18 -8.590 5.772 -16.041 1.00 64.32 O
TER
ATOM 2 P U A 18 -9.694 5.941 -17.169 1.00 65.59 P
ATOM 3 OP1 U A 18 -9.408 4.919 -18.212 1.00 64.84 O
ATOM 4 OP2 U A 18 -11.020 5.950 -16.512 1.00 65.82 O
ATOM 5 O5' U A 18 -8.590 5.772 -16.041 1.00 64.32 O
ATOM 6 C5' U A 18 -7.433 4.997 -16.294 1.00 64.11 C
ATOM 7 C4' U A 18 -6.704 4.723 -15.012 1.00 64.37 C
ATOM 8 O4' U A 18 -6.373 5.979 -14.377 1.00 64.92 O
ATOM 9 C3' U A 18 -7.472 3.942 -13.960 1.00 63.44 C
ATOM 10 O3' U A 18 -7.425 2.565 -14.383 1.00 61.36 O
ATOM 11 C2' U A 18 -6.753 4.356 -12.674 1.00 64.79 C
ATOM 12 O2' U A 18 -5.529 3.683 -12.457 1.00 68.37 O
ATOM 13 C1' U A 18 -6.389 5.814 -12.976 1.00 65.55 C
ATOM 14 N1 U A 18 -7.263 6.844 -12.403 1.00 66.69 N
ATOM 15 C2 U A 18 -7.274 6.981 -11.034 1.00 67.35 C
ATOM 16 O2 U A 18 -6.604 6.278 -10.296 1.00 67.25 O
ATOM 17 N3 U A 18 -8.097 7.972 -10.558 1.00 68.24 N
ATOM 18 C4 U A 18 -8.893 8.820 -11.301 1.00 68.41 C
ATOM 19 O4 U A 18 -9.607 9.641 -10.722 1.00 69.38 O
ATOM 20 C5 U A 18 -8.825 8.615 -12.716 1.00 67.64 C
ATOM 21 C6 U A 18 -8.035 7.656 -13.206 1.00 67.08 C
ATOM 22 P C A 19 -7.053 1.369 -13.363 1.00 57.37 P
ATOM 23 OP1 C A 19 -6.767 1.836 -11.987 1.00 60.65 O
ATOM 24 OP2 C A 19 -6.059 0.525 -14.070 1.00 56.18 O
ATOM 25 O5' C A 19 -8.384 0.510 -13.270 1.00 54.99 O
TER
ATOM 1 O3' A B 16 -12.808 10.292 -15.780 1.00 62.82 O
ATOM 2 P U B 17 -11.448 11.159 -15.965 1.00 64.01 P
ATOM 3 OP1 U B 17 -10.672 11.158 -14.699 1.00 64.71 O
ATOM 4 OP2 U B 17 -11.829 12.461 -16.571 1.00 63.30 O
ATOM 5 O5' U B 17 -10.589 10.370 -17.048 1.00 64.49 O
ATOM 6 C5' U B 17 -9.241 10.744 -17.270 1.00 66.75 C
ATOM 7 C4' U B 17 -8.471 9.646 -17.965 1.00 69.40 C
ATOM 8 O4' U B 17 -7.093 10.105 -18.031 1.00 71.15 O
ATOM 9 C3' U B 17 -8.427 8.283 -17.265 1.00 69.89 C
ATOM 10 O3' U B 17 -9.445 7.416 -17.796 1.00 68.38 O
ATOM 11 C2' U B 17 -7.019 7.793 -17.594 1.00 71.30 C
ATOM 12 O2' U B 17 -6.902 7.217 -18.881 1.00 71.20 O
ATOM 13 C1' U B 17 -6.229 9.101 -17.542 1.00 72.26 C
ATOM 14 N1 U B 17 -5.830 9.487 -16.182 1.00 73.24 N
ATOM 15 C2 U B 17 -5.069 8.592 -15.462 1.00 74.07 C
ATOM 16 O2 U B 17 -4.694 7.522 -15.924 1.00 73.64 O
ATOM 17 N3 U B 17 -4.760 8.993 -14.183 1.00 73.91 N
ATOM 18 C4 U B 17 -5.121 10.177 -13.572 1.00 73.19 C
ATOM 19 O4 U B 17 -4.821 10.365 -12.392 1.00 72.74 O
ATOM 20 C5 U B 17 -5.889 11.061 -14.393 1.00 73.50 C
ATOM 21 C6 U B 17 -6.209 10.695 -15.639 1.00 73.38 C
ATOM 22 P U B 18 -9.694 5.941 -17.169 1.00 65.59 P
ATOM 23 OP1 U B 18 -9.408 4.919 -18.212 1.00 64.84 O
ATOM 24 OP2 U B 18 -11.020 5.950 -16.512 1.00 65.82 O
ATOM 25 O5' U B 18 -8.590 5.772 -16.041 1.00 64.32 O
TER
Atoms:
C4: (-8.893,8.820,-11.301)
N3: (-8.097,7.972,-10.558)
OP1: (-9.408,4.919,-18.212)
OP2: (-11.020,5.950,-16.512)
C2: (-7.274,6.981,-11.034)
C1': (-6.389,5.814,-12.976)
C3': (-7.472,3.942,-13.960)
O5': (-8.590,5.772,-16.041)
O4': (-6.373,5.979,-14.377)
C5': (-7.433,4.997,-16.294)
P: (-9.694,5.941,-17.169)
C4': (-6.704,4.723,-15.012)
C2': (-6.753,4.356,-12.674)
O2': (-5.529,3.683,-12.457)
N1: (-7.263,6.844,-12.403)
O4: (-9.607,9.641,-10.722)
O2: (-6.604,6.278,-10.296)
C6: (-8.035,7.656,-13.206)
C5: (-8.825,8.615,-12.716)
O3': (-7.425,2.565,-14.383)
N3: (-8.097,7.972,-10.558)
OP1: (-9.408,4.919,-18.212)
OP2: (-11.020,5.950,-16.512)
C2: (-7.274,6.981,-11.034)
C1': (-6.389,5.814,-12.976)
C3': (-7.472,3.942,-13.960)
O5': (-8.590,5.772,-16.041)
O4': (-6.373,5.979,-14.377)
C5': (-7.433,4.997,-16.294)
P: (-9.694,5.941,-17.169)
C4': (-6.704,4.723,-15.012)
C2': (-6.753,4.356,-12.674)
O2': (-5.529,3.683,-12.457)
N1: (-7.263,6.844,-12.403)
O4: (-9.607,9.641,-10.722)
O2: (-6.604,6.278,-10.296)
C6: (-8.035,7.656,-13.206)
C5: (-8.825,8.615,-12.716)
O3': (-7.425,2.565,-14.383)
C4: (-5.121,10.177,-13.572)
N3: (-4.760,8.993,-14.183)
OP1: (-10.672,11.158,-14.699)
OP2: (-11.829,12.461,-16.571)
C2: (-5.069,8.592,-15.462)
C1': (-6.229,9.101,-17.542)
C3': (-8.427,8.283,-17.265)
O5': (-10.589,10.370,-17.048)
O4': (-7.093,10.105,-18.031)
C5': (-9.241,10.744,-17.270)
P: (-11.448,11.159,-15.965)
C4': (-8.471,9.646,-17.965)
C2': (-7.019,7.793,-17.594)
O2': (-6.902,7.217,-18.881)
N1: (-5.830,9.487,-16.182)
O4: (-4.821,10.365,-12.392)
O2: (-4.694,7.522,-15.924)
C6: (-6.209,10.695,-15.639)
C5: (-5.889,11.061,-14.393)
O3': (-9.445,7.416,-17.796)
N3: (-4.760,8.993,-14.183)
OP1: (-10.672,11.158,-14.699)
OP2: (-11.829,12.461,-16.571)
C2: (-5.069,8.592,-15.462)
C1': (-6.229,9.101,-17.542)
C3': (-8.427,8.283,-17.265)
O5': (-10.589,10.370,-17.048)
O4': (-7.093,10.105,-18.031)
C5': (-9.241,10.744,-17.270)
P: (-11.448,11.159,-15.965)
C4': (-8.471,9.646,-17.965)
C2': (-7.019,7.793,-17.594)
O2': (-6.902,7.217,-18.881)
N1: (-5.830,9.487,-16.182)
O4: (-4.821,10.365,-12.392)
O2: (-4.694,7.522,-15.924)
C6: (-6.209,10.695,-15.639)
C5: (-5.889,11.061,-14.393)
O3': (-9.445,7.416,-17.796)
Image (generated by PyMOL):