ClaRNA

Doublet info:

Details

Nucleotide types: UU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2EES:A34:A33

Extra

PDB:
ATOM 1 O3' U A 33 -3.907 -16.846 -2.039 1.00 34.07 O
ATOM 2 P U A 34 -4.900 -17.829 -1.238 1.00 35.41 P
ATOM 3 OP1 U A 34 -4.456 -19.252 -1.269 1.00 31.45 O
ATOM 4 OP2 U A 34 -6.301 -17.494 -1.652 1.00 33.67 O
ATOM 5 O5' U A 34 -4.746 -17.338 0.283 1.00 34.27 O
ATOM 6 C5' U A 34 -3.649 -17.783 1.080 1.00 33.68 C
ATOM 7 C4' U A 34 -3.919 -17.555 2.553 1.00 33.30 C
ATOM 8 O4' U A 34 -3.742 -16.154 2.863 1.00 32.20 O
ATOM 9 C3' U A 34 -5.333 -17.924 2.993 1.00 33.98 C
ATOM 10 O3' U A 34 -5.294 -18.705 4.172 1.00 37.85 O
ATOM 11 C2' U A 34 -6.020 -16.570 3.189 1.00 32.28 C
ATOM 12 O2' U A 34 -7.038 -16.585 4.190 1.00 30.44 O
ATOM 13 C1' U A 34 -4.839 -15.707 3.645 1.00 30.28 C
ATOM 14 N1 U A 34 -5.006 -14.263 3.431 1.00 27.42 N
ATOM 15 C2 U A 34 -4.629 -13.463 4.476 1.00 26.25 C
ATOM 16 O2 U A 34 -4.233 -13.919 5.550 1.00 25.99 O
ATOM 17 N3 U A 34 -4.731 -12.123 4.247 1.00 26.00 N
ATOM 18 C4 U A 34 -5.169 -11.495 3.143 1.00 26.82 C
ATOM 19 O4 U A 34 -5.104 -10.266 3.103 1.00 25.40 O
ATOM 20 C5 U A 34 -5.605 -12.379 2.079 1.00 26.20 C
ATOM 21 C6 U A 34 -5.499 -13.709 2.262 1.00 27.25 C
ATOM 22 P C A 35 -6.501 -19.702 4.494 1.00 41.60 P
ATOM 23 OP1 C A 35 -6.308 -20.932 3.669 1.00 41.15 O
ATOM 24 OP2 C A 35 -7.799 -18.970 4.443 1.00 41.06 O
ATOM 25 O5' C A 35 -6.266 -20.152 5.978 1.00 41.54 O
TER

ATOM 1 O3' U B 32 -7.457 -12.834 -0.909 1.00 30.79 O
ATOM 2 P U B 33 -6.646 -11.955 -1.988 1.00 32.78 P
ATOM 3 OP1 U B 33 -6.091 -10.787 -1.255 1.00 31.55 O
ATOM 4 OP2 U B 33 -7.500 -11.687 -3.190 1.00 33.19 O
ATOM 5 O5' U B 33 -5.461 -12.914 -2.438 1.00 32.70 O
ATOM 6 C5' U B 33 -5.717 -14.000 -3.342 1.00 34.39 C
ATOM 7 C4' U B 33 -4.562 -14.948 -3.340 1.00 36.00 C
ATOM 8 O4' U B 33 -3.400 -14.286 -3.957 1.00 36.27 O
ATOM 9 C3' U B 33 -4.083 -15.429 -1.977 1.00 35.38 C
ATOM 10 O3' U B 33 -3.907 -16.846 -2.039 1.00 34.07 O
ATOM 11 C2' U B 33 -2.720 -14.730 -1.837 1.00 36.80 C
ATOM 12 O2' U B 33 -1.840 -15.447 -1.016 1.00 37.37 O
ATOM 13 C1' U B 33 -2.240 -14.689 -3.283 1.00 37.63 C
ATOM 14 N1 U B 33 -1.180 -13.704 -3.580 1.00 39.07 N
ATOM 15 C2 U B 33 -0.166 -14.093 -4.450 1.00 40.51 C
ATOM 16 O2 U B 33 -0.164 -15.172 -5.034 1.00 41.79 O
ATOM 17 N3 U B 33 0.841 -13.167 -4.631 1.00 40.11 N
ATOM 18 C4 U B 33 0.913 -11.885 -4.088 1.00 40.88 C
ATOM 19 O4 U B 33 1.923 -11.163 -4.317 1.00 40.53 O
ATOM 20 C5 U B 33 -0.192 -11.543 -3.250 1.00 39.39 C
ATOM 21 C6 U B 33 -1.170 -12.448 -3.018 1.00 39.47 C
ATOM 22 P U B 34 -4.900 -17.829 -1.238 1.00 35.41 P
ATOM 23 OP1 U B 34 -4.456 -19.252 -1.269 1.00 31.45 O
ATOM 24 OP2 U B 34 -6.301 -17.494 -1.652 1.00 33.67 O
ATOM 25 O5' U B 34 -4.746 -17.338 0.283 1.00 34.27 O
TER

Atoms:
C4: (-5.169,-11.495,3.143)
N3: (-4.731,-12.123,4.247)
OP1: (-4.456,-19.252,-1.269)
OP2: (-6.301,-17.494,-1.652)
C2: (-4.629,-13.463,4.476)
C1': (-4.839,-15.707,3.645)
C3': (-5.333,-17.924,2.993)
O5': (-4.746,-17.338,0.283)
O4': (-3.742,-16.154,2.863)
C5': (-3.649,-17.783,1.080)
P: (-4.900,-17.829,-1.238)
C4': (-3.919,-17.555,2.553)
C2': (-6.020,-16.570,3.189)
O2': (-7.038,-16.585,4.190)
N1: (-5.006,-14.263,3.431)
O4: (-5.104,-10.266,3.103)
O2: (-4.233,-13.919,5.550)
C6: (-5.499,-13.709,2.262)
C5: (-5.605,-12.379,2.079)
O3': (-5.294,-18.705,4.172)
C4: (0.913,-11.885,-4.088)
N3: (0.841,-13.167,-4.631)
OP1: (-6.091,-10.787,-1.255)
OP2: (-7.500,-11.687,-3.190)
C2: (-0.166,-14.093,-4.450)
C1': (-2.240,-14.689,-3.283)
C3': (-4.083,-15.429,-1.977)
O5': (-5.461,-12.914,-2.438)
O4': (-3.400,-14.286,-3.957)
C5': (-5.717,-14.000,-3.342)
P: (-6.646,-11.955,-1.988)
C4': (-4.562,-14.948,-3.340)
C2': (-2.720,-14.730,-1.837)
O2': (-1.840,-15.447,-1.016)
N1: (-1.180,-13.704,-3.580)
O4: (1.923,-11.163,-4.317)
O2: (-0.164,-15.172,-5.034)
C6: (-1.170,-12.448,-3.018)
C5: (-0.192,-11.543,-3.250)
O3': (-3.907,-16.846,-2.039)
Image (generated by PyMOL):
PyMOL image
show in jmol