ClaRNA

Doublet info:

Details

Nucleotide types: UU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2EEW:A34:A33

Extra

PDB:
ATOM 1 O3' U A 33 3.083 16.399 -1.827 1.00 63.26 O
ATOM 2 P U A 34 4.273 17.172 -1.067 1.00 63.05 P
ATOM 3 OP1 U A 34 3.887 18.604 -0.979 1.00 62.50 O
ATOM 4 OP2 U A 34 5.557 16.797 -1.718 1.00 63.23 O
ATOM 5 O5' U A 34 4.257 16.565 0.407 1.00 62.05 O
ATOM 6 C5' U A 34 3.083 16.628 1.213 1.00 59.48 C
ATOM 7 C4' U A 34 3.439 16.941 2.648 1.00 57.85 C
ATOM 8 O4' U A 34 3.384 15.715 3.427 1.00 57.29 O
ATOM 9 C3' U A 34 4.849 17.480 2.858 1.00 57.29 C
ATOM 10 O3' U A 34 4.894 18.252 4.057 1.00 56.41 O
ATOM 11 C2' U A 34 5.669 16.201 3.009 1.00 57.08 C
ATOM 12 O2' U A 34 6.853 16.384 3.760 1.00 57.67 O
ATOM 13 C1' U A 34 4.694 15.310 3.776 1.00 56.18 C
ATOM 14 N1 U A 34 4.825 13.863 3.546 1.00 54.51 N
ATOM 15 C2 U A 34 4.556 13.028 4.617 1.00 53.38 C
ATOM 16 O2 U A 34 4.216 13.446 5.713 1.00 53.78 O
ATOM 17 N3 U A 34 4.699 11.688 4.360 1.00 52.29 N
ATOM 18 C4 U A 34 5.073 11.105 3.168 1.00 52.35 C
ATOM 19 O4 U A 34 5.155 9.874 3.097 1.00 51.77 O
ATOM 20 C5 U A 34 5.332 12.032 2.104 1.00 52.34 C
ATOM 21 C6 U A 34 5.202 13.348 2.324 1.00 53.47 C
ATOM 22 P C A 35 6.019 19.388 4.238 1.00 57.04 P
ATOM 23 OP1 C A 35 5.643 20.550 3.387 1.00 56.19 O
ATOM 24 OP2 C A 35 7.348 18.752 4.062 1.00 56.31 O
ATOM 25 O5' C A 35 5.897 19.814 5.771 1.00 55.32 O
TER

ATOM 1 O3' C B 32 7.320 12.392 -0.935 1.00 57.63 O
ATOM 2 P U B 33 6.564 11.474 -2.017 1.00 59.14 P
ATOM 3 OP1 U B 33 5.930 10.364 -1.263 1.00 58.63 O
ATOM 4 OP2 U B 33 7.509 11.167 -3.124 1.00 58.97 O
ATOM 5 O5' U B 33 5.406 12.414 -2.578 1.00 59.97 O
ATOM 6 C5' U B 33 4.504 13.070 -1.690 1.00 61.57 C
ATOM 7 C4' U B 33 3.729 14.135 -2.427 1.00 62.39 C
ATOM 8 O4' U B 33 2.853 13.500 -3.392 1.00 63.27 O
ATOM 9 C3' U B 33 2.844 15.022 -1.551 1.00 62.94 C
ATOM 10 O3' U B 33 3.083 16.399 -1.827 1.00 63.26 O
ATOM 11 C2' U B 33 1.417 14.625 -1.936 1.00 63.04 C
ATOM 12 O2' U B 33 0.514 15.714 -1.896 1.00 63.12 O
ATOM 13 C1' U B 33 1.601 14.145 -3.373 1.00 63.14 C
ATOM 14 N1 U B 33 0.583 13.182 -3.818 1.00 63.38 N
ATOM 15 C2 U B 33 -0.265 13.571 -4.841 1.00 63.58 C
ATOM 16 O2 U B 33 -0.201 14.668 -5.373 1.00 64.27 O
ATOM 17 N3 U B 33 -1.188 12.627 -5.219 1.00 63.00 N
ATOM 18 C4 U B 33 -1.348 11.364 -4.689 1.00 62.99 C
ATOM 19 O4 U B 33 -2.217 10.621 -5.148 1.00 63.03 O
ATOM 20 C5 U B 33 -0.436 11.038 -3.634 1.00 62.86 C
ATOM 21 C6 U B 33 0.475 11.937 -3.244 1.00 62.94 C
ATOM 22 P U B 34 4.273 17.172 -1.067 1.00 63.05 P
ATOM 23 OP1 U B 34 3.887 18.604 -0.979 1.00 62.50 O
ATOM 24 OP2 U B 34 5.557 16.797 -1.718 1.00 63.23 O
ATOM 25 O5' U B 34 4.257 16.565 0.407 1.00 62.05 O
TER

Atoms:
C4: (5.073,11.105,3.168)
N3: (4.699,11.688,4.360)
OP1: (3.887,18.604,-0.979)
OP2: (5.557,16.797,-1.718)
C2: (4.556,13.028,4.617)
C1': (4.694,15.310,3.776)
C3': (4.849,17.480,2.858)
O5': (4.257,16.565,0.407)
O4': (3.384,15.715,3.427)
C5': (3.083,16.628,1.213)
P: (4.273,17.172,-1.067)
C4': (3.439,16.941,2.648)
C2': (5.669,16.201,3.009)
O2': (6.853,16.384,3.760)
N1: (4.825,13.863,3.546)
O4: (5.155,9.874,3.097)
O2: (4.216,13.446,5.713)
C6: (5.202,13.348,2.324)
C5: (5.332,12.032,2.104)
O3': (4.894,18.252,4.057)
C4: (-1.348,11.364,-4.689)
N3: (-1.188,12.627,-5.219)
OP1: (5.930,10.364,-1.263)
OP2: (7.509,11.167,-3.124)
C2: (-0.265,13.571,-4.841)
C1': (1.601,14.145,-3.373)
C3': (2.844,15.022,-1.551)
O5': (5.406,12.414,-2.578)
O4': (2.853,13.500,-3.392)
C5': (4.504,13.070,-1.690)
P: (6.564,11.474,-2.017)
C4': (3.729,14.135,-2.427)
C2': (1.417,14.625,-1.936)
O2': (0.514,15.714,-1.896)
N1: (0.583,13.182,-3.818)
O4: (-2.217,10.621,-5.148)
O2: (-0.201,14.668,-5.373)
C6: (0.475,11.937,-3.244)
C5: (-0.436,11.038,-3.634)
O3': (3.083,16.399,-1.827)
Image (generated by PyMOL):
PyMOL image
show in jmol