Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ9:0480:0479
Extra
PDB:
ATOM 1 O3' C A 479 18.591 179.013 67.007 1.00 48.12 O
ATOM 2 P C A 480 19.907 179.379 67.855 1.00 51.26 P
ATOM 3 OP1 C A 480 19.854 180.830 68.199 1.00 49.12 O
ATOM 4 OP2 C A 480 21.100 178.829 67.142 1.00 49.56 O
ATOM 5 O5' C A 480 19.737 178.534 69.189 1.00 50.14 O
ATOM 6 C5' C A 480 18.555 178.646 69.992 1.00 49.32 C
ATOM 7 C4' C A 480 18.625 177.659 71.125 1.00 50.57 C
ATOM 8 O4' C A 480 18.477 176.310 70.607 1.00 51.34 O
ATOM 9 C3' C A 480 19.968 177.619 71.836 1.00 50.56 C
ATOM 10 O3' C A 480 20.114 178.673 72.773 1.00 49.93 O
ATOM 11 C2' C A 480 19.944 176.238 72.471 1.00 50.80 C
ATOM 12 O2' C A 480 19.110 176.192 73.615 1.00 52.85 O
ATOM 13 C1' C A 480 19.300 175.419 71.352 1.00 49.79 C
ATOM 14 N1 C A 480 20.278 174.800 70.434 1.00 48.69 N
ATOM 15 C2 C A 480 20.895 173.578 70.804 1.00 49.02 C
ATOM 16 O2 C A 480 20.631 173.067 71.910 1.00 47.60 O
ATOM 17 N3 C A 480 21.765 172.994 69.946 1.00 47.83 N
ATOM 18 C4 C A 480 22.039 173.576 68.774 1.00 47.25 C
ATOM 19 N4 C A 480 22.895 172.958 67.958 1.00 47.67 N
ATOM 20 C5 C A 480 21.446 174.815 68.386 1.00 47.23 C
ATOM 21 C6 C A 480 20.582 175.386 69.236 1.00 47.62 C
ATOM 22 P U A 481 21.580 179.243 73.100 1.00 50.17 P
ATOM 23 OP1 U A 481 21.393 180.316 74.113 1.00 48.94 O
ATOM 24 OP2 U A 481 22.292 179.546 71.823 1.00 47.43 O
ATOM 25 O5' U A 481 22.305 178.010 73.807 1.00 48.77 O
TER
ATOM 1 O3' C B 478 19.476 177.853 61.102 1.00 52.40 O
ATOM 2 P C B 479 20.398 178.312 62.336 1.00 52.31 P
ATOM 3 OP1 C B 479 20.508 179.793 62.295 1.00 52.21 O
ATOM 4 OP2 C B 479 21.636 177.479 62.340 1.00 51.55 O
ATOM 5 O5' C B 479 19.547 177.915 63.617 1.00 50.38 O
ATOM 6 C5' C B 479 18.268 178.497 63.865 1.00 48.56 C
ATOM 7 C4' C B 479 17.647 177.852 65.076 1.00 48.83 C
ATOM 8 O4' C B 479 17.369 176.451 64.798 1.00 48.49 O
ATOM 9 C3' C B 479 18.543 177.789 66.299 1.00 47.67 C
ATOM 10 O3' C B 479 18.591 179.013 67.007 1.00 48.12 O
ATOM 11 C2' C B 479 17.903 176.666 67.101 1.00 48.73 C
ATOM 12 O2' C B 479 16.720 177.074 67.767 1.00 49.36 O
ATOM 13 C1' C B 479 17.548 175.681 65.985 1.00 47.47 C
ATOM 14 N1 C B 479 18.606 174.675 65.741 1.00 46.15 N
ATOM 15 C2 C B 479 18.595 173.478 66.466 1.00 45.33 C
ATOM 16 O2 C B 479 17.723 173.300 67.325 1.00 45.73 O
ATOM 17 N3 C B 479 19.538 172.546 66.210 1.00 45.84 N
ATOM 18 C4 C B 479 20.467 172.772 65.281 1.00 45.20 C
ATOM 19 N4 C B 479 21.363 171.818 65.044 1.00 46.01 N
ATOM 20 C5 C B 479 20.518 173.985 64.549 1.00 45.61 C
ATOM 21 C6 C B 479 19.581 174.901 64.809 1.00 47.02 C
ATOM 22 P C B 480 19.907 179.379 67.855 1.00 51.26 P
ATOM 23 OP1 C B 480 19.854 180.830 68.199 1.00 49.12 O
ATOM 24 OP2 C B 480 21.100 178.829 67.142 1.00 49.56 O
ATOM 25 O5' C B 480 19.737 178.534 69.189 1.00 50.14 O
TER
ATOM 2 P C A 480 19.907 179.379 67.855 1.00 51.26 P
ATOM 3 OP1 C A 480 19.854 180.830 68.199 1.00 49.12 O
ATOM 4 OP2 C A 480 21.100 178.829 67.142 1.00 49.56 O
ATOM 5 O5' C A 480 19.737 178.534 69.189 1.00 50.14 O
ATOM 6 C5' C A 480 18.555 178.646 69.992 1.00 49.32 C
ATOM 7 C4' C A 480 18.625 177.659 71.125 1.00 50.57 C
ATOM 8 O4' C A 480 18.477 176.310 70.607 1.00 51.34 O
ATOM 9 C3' C A 480 19.968 177.619 71.836 1.00 50.56 C
ATOM 10 O3' C A 480 20.114 178.673 72.773 1.00 49.93 O
ATOM 11 C2' C A 480 19.944 176.238 72.471 1.00 50.80 C
ATOM 12 O2' C A 480 19.110 176.192 73.615 1.00 52.85 O
ATOM 13 C1' C A 480 19.300 175.419 71.352 1.00 49.79 C
ATOM 14 N1 C A 480 20.278 174.800 70.434 1.00 48.69 N
ATOM 15 C2 C A 480 20.895 173.578 70.804 1.00 49.02 C
ATOM 16 O2 C A 480 20.631 173.067 71.910 1.00 47.60 O
ATOM 17 N3 C A 480 21.765 172.994 69.946 1.00 47.83 N
ATOM 18 C4 C A 480 22.039 173.576 68.774 1.00 47.25 C
ATOM 19 N4 C A 480 22.895 172.958 67.958 1.00 47.67 N
ATOM 20 C5 C A 480 21.446 174.815 68.386 1.00 47.23 C
ATOM 21 C6 C A 480 20.582 175.386 69.236 1.00 47.62 C
ATOM 22 P U A 481 21.580 179.243 73.100 1.00 50.17 P
ATOM 23 OP1 U A 481 21.393 180.316 74.113 1.00 48.94 O
ATOM 24 OP2 U A 481 22.292 179.546 71.823 1.00 47.43 O
ATOM 25 O5' U A 481 22.305 178.010 73.807 1.00 48.77 O
TER
ATOM 1 O3' C B 478 19.476 177.853 61.102 1.00 52.40 O
ATOM 2 P C B 479 20.398 178.312 62.336 1.00 52.31 P
ATOM 3 OP1 C B 479 20.508 179.793 62.295 1.00 52.21 O
ATOM 4 OP2 C B 479 21.636 177.479 62.340 1.00 51.55 O
ATOM 5 O5' C B 479 19.547 177.915 63.617 1.00 50.38 O
ATOM 6 C5' C B 479 18.268 178.497 63.865 1.00 48.56 C
ATOM 7 C4' C B 479 17.647 177.852 65.076 1.00 48.83 C
ATOM 8 O4' C B 479 17.369 176.451 64.798 1.00 48.49 O
ATOM 9 C3' C B 479 18.543 177.789 66.299 1.00 47.67 C
ATOM 10 O3' C B 479 18.591 179.013 67.007 1.00 48.12 O
ATOM 11 C2' C B 479 17.903 176.666 67.101 1.00 48.73 C
ATOM 12 O2' C B 479 16.720 177.074 67.767 1.00 49.36 O
ATOM 13 C1' C B 479 17.548 175.681 65.985 1.00 47.47 C
ATOM 14 N1 C B 479 18.606 174.675 65.741 1.00 46.15 N
ATOM 15 C2 C B 479 18.595 173.478 66.466 1.00 45.33 C
ATOM 16 O2 C B 479 17.723 173.300 67.325 1.00 45.73 O
ATOM 17 N3 C B 479 19.538 172.546 66.210 1.00 45.84 N
ATOM 18 C4 C B 479 20.467 172.772 65.281 1.00 45.20 C
ATOM 19 N4 C B 479 21.363 171.818 65.044 1.00 46.01 N
ATOM 20 C5 C B 479 20.518 173.985 64.549 1.00 45.61 C
ATOM 21 C6 C B 479 19.581 174.901 64.809 1.00 47.02 C
ATOM 22 P C B 480 19.907 179.379 67.855 1.00 51.26 P
ATOM 23 OP1 C B 480 19.854 180.830 68.199 1.00 49.12 O
ATOM 24 OP2 C B 480 21.100 178.829 67.142 1.00 49.56 O
ATOM 25 O5' C B 480 19.737 178.534 69.189 1.00 50.14 O
TER
Atoms:
C2: (20.895,173.578,70.804)
OP1: (19.854,180.830,68.199)
OP2: (21.100,178.829,67.142)
C4: (22.039,173.576,68.774)
O5': (19.737,178.534,69.189)
C3': (19.968,177.619,71.836)
C1': (19.300,175.419,71.352)
O4': (18.477,176.310,70.607)
C5': (18.555,178.646,69.992)
P: (19.907,179.379,67.855)
O2: (20.631,173.067,71.910)
C4': (18.625,177.659,71.125)
C2': (19.944,176.238,72.471)
O2': (19.110,176.192,73.615)
N1: (20.278,174.800,70.434)
N3: (21.765,172.994,69.946)
N4: (22.895,172.958,67.958)
C6: (20.582,175.386,69.236)
C5: (21.446,174.815,68.386)
O3': (20.114,178.673,72.773)
OP1: (19.854,180.830,68.199)
OP2: (21.100,178.829,67.142)
C4: (22.039,173.576,68.774)
O5': (19.737,178.534,69.189)
C3': (19.968,177.619,71.836)
C1': (19.300,175.419,71.352)
O4': (18.477,176.310,70.607)
C5': (18.555,178.646,69.992)
P: (19.907,179.379,67.855)
O2: (20.631,173.067,71.910)
C4': (18.625,177.659,71.125)
C2': (19.944,176.238,72.471)
O2': (19.110,176.192,73.615)
N1: (20.278,174.800,70.434)
N3: (21.765,172.994,69.946)
N4: (22.895,172.958,67.958)
C6: (20.582,175.386,69.236)
C5: (21.446,174.815,68.386)
O3': (20.114,178.673,72.773)
C2: (18.595,173.478,66.466)
OP1: (20.508,179.793,62.295)
OP2: (21.636,177.479,62.340)
C4: (20.467,172.772,65.281)
O5': (19.547,177.915,63.617)
C3': (18.543,177.789,66.299)
C1': (17.548,175.681,65.985)
O4': (17.369,176.451,64.798)
C5': (18.268,178.497,63.865)
P: (20.398,178.312,62.336)
O2: (17.723,173.300,67.325)
C4': (17.647,177.852,65.076)
C2': (17.903,176.666,67.101)
O2': (16.720,177.074,67.767)
N1: (18.606,174.675,65.741)
N3: (19.538,172.546,66.210)
N4: (21.363,171.818,65.044)
C6: (19.581,174.901,64.809)
C5: (20.518,173.985,64.549)
O3': (18.591,179.013,67.007)
OP1: (20.508,179.793,62.295)
OP2: (21.636,177.479,62.340)
C4: (20.467,172.772,65.281)
O5': (19.547,177.915,63.617)
C3': (18.543,177.789,66.299)
C1': (17.548,175.681,65.985)
O4': (17.369,176.451,64.798)
C5': (18.268,178.497,63.865)
P: (20.398,178.312,62.336)
O2: (17.723,173.300,67.325)
C4': (17.647,177.852,65.076)
C2': (17.903,176.666,67.101)
O2': (16.720,177.074,67.767)
N1: (18.606,174.675,65.741)
N3: (19.538,172.546,66.210)
N4: (21.363,171.818,65.044)
C6: (19.581,174.901,64.809)
C5: (20.518,173.985,64.549)
O3': (18.591,179.013,67.007)
Image (generated by PyMOL):