Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0344:0343
Extra
PDB:
ATOM 1 O3' C A 343 53.452 126.348 17.903 1.00 63.93 O
ATOM 2 P C A 344 54.266 125.623 16.724 1.00 64.09 P
ATOM 3 OP1 C A 344 55.508 125.051 17.312 1.00 63.87 O
ATOM 4 OP2 C A 344 54.360 126.581 15.604 1.00 65.29 O
ATOM 5 O5' C A 344 53.334 124.411 16.277 1.00 64.38 O
ATOM 6 C5' C A 344 53.139 123.275 17.141 1.00 65.52 C
ATOM 7 C4' C A 344 52.134 122.320 16.542 1.00 65.16 C
ATOM 8 O4' C A 344 50.868 123.000 16.350 1.00 65.12 O
ATOM 9 C3' C A 344 52.493 121.773 15.174 1.00 66.03 C
ATOM 10 O3' C A 344 53.363 120.649 15.324 1.00 67.84 O
ATOM 11 C2' C A 344 51.126 121.411 14.603 1.00 66.18 C
ATOM 12 O2' C A 344 50.631 120.184 15.095 1.00 66.91 O
ATOM 13 C1' C A 344 50.253 122.538 15.163 1.00 66.23 C
ATOM 14 N1 C A 344 50.077 123.687 14.258 1.00 67.46 N
ATOM 15 C2 C A 344 48.986 123.700 13.372 1.00 68.12 C
ATOM 16 O2 C A 344 48.198 122.738 13.360 1.00 68.67 O
ATOM 17 N3 C A 344 48.819 124.763 12.552 1.00 68.45 N
ATOM 18 C4 C A 344 49.682 125.783 12.595 1.00 68.59 C
ATOM 19 N4 C A 344 49.472 126.819 11.777 1.00 69.26 N
ATOM 20 C5 C A 344 50.798 125.791 13.478 1.00 68.18 C
ATOM 21 C6 C A 344 50.957 124.734 14.282 1.00 67.83 C
ATOM 22 P A A 345 54.344 120.214 14.123 1.00 68.86 P
ATOM 23 OP1 A A 345 53.533 119.497 13.103 1.00 69.98 O
ATOM 24 OP2 A A 345 55.548 119.560 14.700 1.00 68.54 O
ATOM 25 O5' A A 345 54.807 121.587 13.479 1.00 70.00 O
TER
ATOM 1 O3' A B 342 51.597 132.244 17.171 1.00 65.18 O
ATOM 2 P C B 343 52.477 131.235 16.298 1.00 63.89 P
ATOM 3 OP1 C B 343 53.901 131.494 16.617 1.00 64.23 O
ATOM 4 OP2 C B 343 52.019 131.283 14.885 1.00 64.69 O
ATOM 5 O5' C B 343 52.098 129.810 16.885 1.00 64.58 O
ATOM 6 C5' C B 343 52.527 129.426 18.197 1.00 64.96 C
ATOM 7 C4' C B 343 51.916 128.104 18.576 1.00 64.79 C
ATOM 8 O4' C B 343 50.471 128.228 18.568 1.00 65.05 O
ATOM 9 C3' C B 343 52.190 126.946 17.631 1.00 64.19 C
ATOM 10 O3' C B 343 53.452 126.348 17.903 1.00 63.93 O
ATOM 11 C2' C B 343 51.042 126.003 17.955 1.00 65.09 C
ATOM 12 O2' C B 343 51.267 125.281 19.144 1.00 65.33 O
ATOM 13 C1' C B 343 49.896 126.990 18.191 1.00 66.48 C
ATOM 14 N1 C B 343 49.051 127.191 17.001 1.00 68.82 N
ATOM 15 C2 C B 343 48.063 126.240 16.717 1.00 70.13 C
ATOM 16 O2 C B 343 47.915 125.274 17.485 1.00 71.67 O
ATOM 17 N3 C B 343 47.297 126.393 15.618 1.00 71.13 N
ATOM 18 C4 C B 343 47.481 127.443 14.819 1.00 71.39 C
ATOM 19 N4 C B 343 46.701 127.543 13.738 1.00 73.01 N
ATOM 20 C5 C B 343 48.469 128.434 15.088 1.00 70.29 C
ATOM 21 C6 C B 343 49.224 128.271 16.179 1.00 69.10 C
ATOM 22 P C B 344 54.266 125.623 16.724 1.00 64.09 P
ATOM 23 OP1 C B 344 55.508 125.051 17.312 1.00 63.87 O
ATOM 24 OP2 C B 344 54.360 126.581 15.604 1.00 65.29 O
ATOM 25 O5' C B 344 53.334 124.411 16.277 1.00 64.38 O
TER
ATOM 2 P C A 344 54.266 125.623 16.724 1.00 64.09 P
ATOM 3 OP1 C A 344 55.508 125.051 17.312 1.00 63.87 O
ATOM 4 OP2 C A 344 54.360 126.581 15.604 1.00 65.29 O
ATOM 5 O5' C A 344 53.334 124.411 16.277 1.00 64.38 O
ATOM 6 C5' C A 344 53.139 123.275 17.141 1.00 65.52 C
ATOM 7 C4' C A 344 52.134 122.320 16.542 1.00 65.16 C
ATOM 8 O4' C A 344 50.868 123.000 16.350 1.00 65.12 O
ATOM 9 C3' C A 344 52.493 121.773 15.174 1.00 66.03 C
ATOM 10 O3' C A 344 53.363 120.649 15.324 1.00 67.84 O
ATOM 11 C2' C A 344 51.126 121.411 14.603 1.00 66.18 C
ATOM 12 O2' C A 344 50.631 120.184 15.095 1.00 66.91 O
ATOM 13 C1' C A 344 50.253 122.538 15.163 1.00 66.23 C
ATOM 14 N1 C A 344 50.077 123.687 14.258 1.00 67.46 N
ATOM 15 C2 C A 344 48.986 123.700 13.372 1.00 68.12 C
ATOM 16 O2 C A 344 48.198 122.738 13.360 1.00 68.67 O
ATOM 17 N3 C A 344 48.819 124.763 12.552 1.00 68.45 N
ATOM 18 C4 C A 344 49.682 125.783 12.595 1.00 68.59 C
ATOM 19 N4 C A 344 49.472 126.819 11.777 1.00 69.26 N
ATOM 20 C5 C A 344 50.798 125.791 13.478 1.00 68.18 C
ATOM 21 C6 C A 344 50.957 124.734 14.282 1.00 67.83 C
ATOM 22 P A A 345 54.344 120.214 14.123 1.00 68.86 P
ATOM 23 OP1 A A 345 53.533 119.497 13.103 1.00 69.98 O
ATOM 24 OP2 A A 345 55.548 119.560 14.700 1.00 68.54 O
ATOM 25 O5' A A 345 54.807 121.587 13.479 1.00 70.00 O
TER
ATOM 1 O3' A B 342 51.597 132.244 17.171 1.00 65.18 O
ATOM 2 P C B 343 52.477 131.235 16.298 1.00 63.89 P
ATOM 3 OP1 C B 343 53.901 131.494 16.617 1.00 64.23 O
ATOM 4 OP2 C B 343 52.019 131.283 14.885 1.00 64.69 O
ATOM 5 O5' C B 343 52.098 129.810 16.885 1.00 64.58 O
ATOM 6 C5' C B 343 52.527 129.426 18.197 1.00 64.96 C
ATOM 7 C4' C B 343 51.916 128.104 18.576 1.00 64.79 C
ATOM 8 O4' C B 343 50.471 128.228 18.568 1.00 65.05 O
ATOM 9 C3' C B 343 52.190 126.946 17.631 1.00 64.19 C
ATOM 10 O3' C B 343 53.452 126.348 17.903 1.00 63.93 O
ATOM 11 C2' C B 343 51.042 126.003 17.955 1.00 65.09 C
ATOM 12 O2' C B 343 51.267 125.281 19.144 1.00 65.33 O
ATOM 13 C1' C B 343 49.896 126.990 18.191 1.00 66.48 C
ATOM 14 N1 C B 343 49.051 127.191 17.001 1.00 68.82 N
ATOM 15 C2 C B 343 48.063 126.240 16.717 1.00 70.13 C
ATOM 16 O2 C B 343 47.915 125.274 17.485 1.00 71.67 O
ATOM 17 N3 C B 343 47.297 126.393 15.618 1.00 71.13 N
ATOM 18 C4 C B 343 47.481 127.443 14.819 1.00 71.39 C
ATOM 19 N4 C B 343 46.701 127.543 13.738 1.00 73.01 N
ATOM 20 C5 C B 343 48.469 128.434 15.088 1.00 70.29 C
ATOM 21 C6 C B 343 49.224 128.271 16.179 1.00 69.10 C
ATOM 22 P C B 344 54.266 125.623 16.724 1.00 64.09 P
ATOM 23 OP1 C B 344 55.508 125.051 17.312 1.00 63.87 O
ATOM 24 OP2 C B 344 54.360 126.581 15.604 1.00 65.29 O
ATOM 25 O5' C B 344 53.334 124.411 16.277 1.00 64.38 O
TER
Atoms:
C2: (48.986,123.700,13.372)
OP1: (55.508,125.051,17.312)
OP2: (54.360,126.581,15.604)
C4: (49.682,125.783,12.595)
O5': (53.334,124.411,16.277)
C3': (52.493,121.773,15.174)
C1': (50.253,122.538,15.163)
O4': (50.868,123.000,16.350)
C5': (53.139,123.275,17.141)
P: (54.266,125.623,16.724)
O2: (48.198,122.738,13.360)
C4': (52.134,122.320,16.542)
C2': (51.126,121.411,14.603)
O2': (50.631,120.184,15.095)
N1: (50.077,123.687,14.258)
N3: (48.819,124.763,12.552)
N4: (49.472,126.819,11.777)
C6: (50.957,124.734,14.282)
C5: (50.798,125.791,13.478)
O3': (53.363,120.649,15.324)
OP1: (55.508,125.051,17.312)
OP2: (54.360,126.581,15.604)
C4: (49.682,125.783,12.595)
O5': (53.334,124.411,16.277)
C3': (52.493,121.773,15.174)
C1': (50.253,122.538,15.163)
O4': (50.868,123.000,16.350)
C5': (53.139,123.275,17.141)
P: (54.266,125.623,16.724)
O2: (48.198,122.738,13.360)
C4': (52.134,122.320,16.542)
C2': (51.126,121.411,14.603)
O2': (50.631,120.184,15.095)
N1: (50.077,123.687,14.258)
N3: (48.819,124.763,12.552)
N4: (49.472,126.819,11.777)
C6: (50.957,124.734,14.282)
C5: (50.798,125.791,13.478)
O3': (53.363,120.649,15.324)
C2: (48.063,126.240,16.717)
OP1: (53.901,131.494,16.617)
OP2: (52.019,131.283,14.885)
C4: (47.481,127.443,14.819)
O5': (52.098,129.810,16.885)
C3': (52.190,126.946,17.631)
C1': (49.896,126.990,18.191)
O4': (50.471,128.228,18.568)
C5': (52.527,129.426,18.197)
P: (52.477,131.235,16.298)
O2: (47.915,125.274,17.485)
C4': (51.916,128.104,18.576)
C2': (51.042,126.003,17.955)
O2': (51.267,125.281,19.144)
N1: (49.051,127.191,17.001)
N3: (47.297,126.393,15.618)
N4: (46.701,127.543,13.738)
C6: (49.224,128.271,16.179)
C5: (48.469,128.434,15.088)
O3': (53.452,126.348,17.903)
OP1: (53.901,131.494,16.617)
OP2: (52.019,131.283,14.885)
C4: (47.481,127.443,14.819)
O5': (52.098,129.810,16.885)
C3': (52.190,126.946,17.631)
C1': (49.896,126.990,18.191)
O4': (50.471,128.228,18.568)
C5': (52.527,129.426,18.197)
P: (52.477,131.235,16.298)
O2: (47.915,125.274,17.485)
C4': (51.916,128.104,18.576)
C2': (51.042,126.003,17.955)
O2': (51.267,125.281,19.144)
N1: (49.051,127.191,17.001)
N3: (47.297,126.393,15.618)
N4: (46.701,127.543,13.738)
C6: (49.224,128.271,16.179)
C5: (48.469,128.434,15.088)
O3': (53.452,126.348,17.903)
Image (generated by PyMOL):