Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01934:01933
Extra
PDB:
ATOM 1 O3' C A1933 101.943 118.610 126.912 1.00 53.67 O
ATOM 2 P C A1934 101.759 120.032 127.629 1.00 55.26 P
ATOM 3 OP1 C A1934 101.647 119.800 129.085 1.00 54.62 O
ATOM 4 OP2 C A1934 100.694 120.781 126.917 1.00 56.08 O
ATOM 5 O5' C A1934 103.135 120.778 127.356 1.00 55.23 O
ATOM 6 C5' C A1934 104.350 120.326 127.970 1.00 54.64 C
ATOM 7 C4' C A1934 105.476 121.260 127.627 1.00 53.44 C
ATOM 8 O4' C A1934 105.856 121.094 126.235 1.00 53.67 O
ATOM 9 C3' C A1934 105.107 122.724 127.729 1.00 52.89 C
ATOM 10 O3' C A1934 105.129 123.204 129.053 1.00 50.94 O
ATOM 11 C2' C A1934 106.130 123.385 126.820 1.00 54.73 C
ATOM 12 O2' C A1934 107.389 123.583 127.425 1.00 54.79 O
ATOM 13 C1' C A1934 106.227 122.354 125.691 1.00 55.14 C
ATOM 14 N1 C A1934 105.309 122.690 124.585 1.00 56.41 N
ATOM 15 C2 C A1934 105.732 123.614 123.624 1.00 56.34 C
ATOM 16 O2 C A1934 106.871 124.079 123.708 1.00 55.16 O
ATOM 17 N3 C A1934 104.890 123.972 122.629 1.00 57.14 N
ATOM 18 C4 C A1934 103.670 123.433 122.563 1.00 57.46 C
ATOM 19 N4 C A1934 102.871 123.817 121.566 1.00 56.42 N
ATOM 20 C5 C A1934 103.216 122.474 123.518 1.00 57.88 C
ATOM 21 C6 C A1934 104.061 122.132 124.501 1.00 57.08 C
ATOM 22 P G A1935 104.216 124.460 129.440 1.00 52.45 P
ATOM 23 OP1 G A1935 104.323 124.651 130.911 1.00 51.73 O
ATOM 24 OP2 G A1935 102.880 124.270 128.823 1.00 52.21 O
ATOM 25 O5' G A1935 104.931 125.675 128.699 1.00 50.80 O
TER
ATOM 1 O3' G B1932 97.979 117.061 122.466 1.00 55.40 O
ATOM 2 P C B1933 98.138 118.215 123.571 1.00 56.94 P
ATOM 3 OP1 C B1933 97.291 117.826 124.732 1.00 55.33 O
ATOM 4 OP2 C B1933 97.944 119.544 122.938 1.00 56.19 O
ATOM 5 O5' C B1933 99.672 118.127 123.981 1.00 56.83 O
ATOM 6 C5' C B1933 100.181 117.007 124.731 1.00 55.78 C
ATOM 7 C4' C B1933 101.656 117.182 124.961 1.00 54.79 C
ATOM 8 O4' C B1933 102.338 117.083 123.688 1.00 54.25 O
ATOM 9 C3' C B1933 102.040 118.549 125.498 1.00 53.87 C
ATOM 10 O3' C B1933 101.943 118.610 126.912 1.00 53.67 O
ATOM 11 C2' C B1933 103.466 118.714 125.001 1.00 55.50 C
ATOM 12 O2' C B1933 104.418 118.041 125.806 1.00 55.93 O
ATOM 13 C1' C B1933 103.376 118.045 123.629 1.00 55.63 C
ATOM 14 N1 C B1933 103.077 118.976 122.525 1.00 56.57 N
ATOM 15 C2 C B1933 104.135 119.653 121.909 1.00 56.58 C
ATOM 16 O2 C B1933 105.286 119.480 122.330 1.00 57.28 O
ATOM 17 N3 C B1933 103.875 120.480 120.872 1.00 56.90 N
ATOM 18 C4 C B1933 102.621 120.649 120.452 1.00 57.47 C
ATOM 19 N4 C B1933 102.414 121.470 119.421 1.00 57.68 N
ATOM 20 C5 C B1933 101.523 119.984 121.070 1.00 57.88 C
ATOM 21 C6 C B1933 101.793 119.168 122.095 1.00 57.28 C
ATOM 22 P C B1934 101.759 120.032 127.629 1.00 55.26 P
ATOM 23 OP1 C B1934 101.647 119.800 129.085 1.00 54.62 O
ATOM 24 OP2 C B1934 100.694 120.781 126.917 1.00 56.08 O
ATOM 25 O5' C B1934 103.135 120.778 127.356 1.00 55.23 O
TER
ATOM 2 P C A1934 101.759 120.032 127.629 1.00 55.26 P
ATOM 3 OP1 C A1934 101.647 119.800 129.085 1.00 54.62 O
ATOM 4 OP2 C A1934 100.694 120.781 126.917 1.00 56.08 O
ATOM 5 O5' C A1934 103.135 120.778 127.356 1.00 55.23 O
ATOM 6 C5' C A1934 104.350 120.326 127.970 1.00 54.64 C
ATOM 7 C4' C A1934 105.476 121.260 127.627 1.00 53.44 C
ATOM 8 O4' C A1934 105.856 121.094 126.235 1.00 53.67 O
ATOM 9 C3' C A1934 105.107 122.724 127.729 1.00 52.89 C
ATOM 10 O3' C A1934 105.129 123.204 129.053 1.00 50.94 O
ATOM 11 C2' C A1934 106.130 123.385 126.820 1.00 54.73 C
ATOM 12 O2' C A1934 107.389 123.583 127.425 1.00 54.79 O
ATOM 13 C1' C A1934 106.227 122.354 125.691 1.00 55.14 C
ATOM 14 N1 C A1934 105.309 122.690 124.585 1.00 56.41 N
ATOM 15 C2 C A1934 105.732 123.614 123.624 1.00 56.34 C
ATOM 16 O2 C A1934 106.871 124.079 123.708 1.00 55.16 O
ATOM 17 N3 C A1934 104.890 123.972 122.629 1.00 57.14 N
ATOM 18 C4 C A1934 103.670 123.433 122.563 1.00 57.46 C
ATOM 19 N4 C A1934 102.871 123.817 121.566 1.00 56.42 N
ATOM 20 C5 C A1934 103.216 122.474 123.518 1.00 57.88 C
ATOM 21 C6 C A1934 104.061 122.132 124.501 1.00 57.08 C
ATOM 22 P G A1935 104.216 124.460 129.440 1.00 52.45 P
ATOM 23 OP1 G A1935 104.323 124.651 130.911 1.00 51.73 O
ATOM 24 OP2 G A1935 102.880 124.270 128.823 1.00 52.21 O
ATOM 25 O5' G A1935 104.931 125.675 128.699 1.00 50.80 O
TER
ATOM 1 O3' G B1932 97.979 117.061 122.466 1.00 55.40 O
ATOM 2 P C B1933 98.138 118.215 123.571 1.00 56.94 P
ATOM 3 OP1 C B1933 97.291 117.826 124.732 1.00 55.33 O
ATOM 4 OP2 C B1933 97.944 119.544 122.938 1.00 56.19 O
ATOM 5 O5' C B1933 99.672 118.127 123.981 1.00 56.83 O
ATOM 6 C5' C B1933 100.181 117.007 124.731 1.00 55.78 C
ATOM 7 C4' C B1933 101.656 117.182 124.961 1.00 54.79 C
ATOM 8 O4' C B1933 102.338 117.083 123.688 1.00 54.25 O
ATOM 9 C3' C B1933 102.040 118.549 125.498 1.00 53.87 C
ATOM 10 O3' C B1933 101.943 118.610 126.912 1.00 53.67 O
ATOM 11 C2' C B1933 103.466 118.714 125.001 1.00 55.50 C
ATOM 12 O2' C B1933 104.418 118.041 125.806 1.00 55.93 O
ATOM 13 C1' C B1933 103.376 118.045 123.629 1.00 55.63 C
ATOM 14 N1 C B1933 103.077 118.976 122.525 1.00 56.57 N
ATOM 15 C2 C B1933 104.135 119.653 121.909 1.00 56.58 C
ATOM 16 O2 C B1933 105.286 119.480 122.330 1.00 57.28 O
ATOM 17 N3 C B1933 103.875 120.480 120.872 1.00 56.90 N
ATOM 18 C4 C B1933 102.621 120.649 120.452 1.00 57.47 C
ATOM 19 N4 C B1933 102.414 121.470 119.421 1.00 57.68 N
ATOM 20 C5 C B1933 101.523 119.984 121.070 1.00 57.88 C
ATOM 21 C6 C B1933 101.793 119.168 122.095 1.00 57.28 C
ATOM 22 P C B1934 101.759 120.032 127.629 1.00 55.26 P
ATOM 23 OP1 C B1934 101.647 119.800 129.085 1.00 54.62 O
ATOM 24 OP2 C B1934 100.694 120.781 126.917 1.00 56.08 O
ATOM 25 O5' C B1934 103.135 120.778 127.356 1.00 55.23 O
TER
Atoms:
C2: (105.732,123.614,123.624)
OP1: (101.647,119.800,129.085)
OP2: (100.694,120.781,126.917)
C4: (103.670,123.433,122.563)
O5': (103.135,120.778,127.356)
C3': (105.107,122.724,127.729)
C1': (106.227,122.354,125.691)
O4': (105.856,121.094,126.235)
C5': (104.350,120.326,127.970)
P: (101.759,120.032,127.629)
O2: (106.871,124.079,123.708)
C4': (105.476,121.260,127.627)
C2': (106.130,123.385,126.820)
O2': (107.389,123.583,127.425)
N1: (105.309,122.690,124.585)
N3: (104.890,123.972,122.629)
N4: (102.871,123.817,121.566)
C6: (104.061,122.132,124.501)
C5: (103.216,122.474,123.518)
O3': (105.129,123.204,129.053)
OP1: (101.647,119.800,129.085)
OP2: (100.694,120.781,126.917)
C4: (103.670,123.433,122.563)
O5': (103.135,120.778,127.356)
C3': (105.107,122.724,127.729)
C1': (106.227,122.354,125.691)
O4': (105.856,121.094,126.235)
C5': (104.350,120.326,127.970)
P: (101.759,120.032,127.629)
O2: (106.871,124.079,123.708)
C4': (105.476,121.260,127.627)
C2': (106.130,123.385,126.820)
O2': (107.389,123.583,127.425)
N1: (105.309,122.690,124.585)
N3: (104.890,123.972,122.629)
N4: (102.871,123.817,121.566)
C6: (104.061,122.132,124.501)
C5: (103.216,122.474,123.518)
O3': (105.129,123.204,129.053)
C2: (104.135,119.653,121.909)
OP1: (97.291,117.826,124.732)
OP2: (97.944,119.544,122.938)
C4: (102.621,120.649,120.452)
O5': (99.672,118.127,123.981)
C3': (102.040,118.549,125.498)
C1': (103.376,118.045,123.629)
O4': (102.338,117.083,123.688)
C5': (100.181,117.007,124.731)
P: (98.138,118.215,123.571)
O2: (105.286,119.480,122.330)
C4': (101.656,117.182,124.961)
C2': (103.466,118.714,125.001)
O2': (104.418,118.041,125.806)
N1: (103.077,118.976,122.525)
N3: (103.875,120.480,120.872)
N4: (102.414,121.470,119.421)
C6: (101.793,119.168,122.095)
C5: (101.523,119.984,121.070)
O3': (101.943,118.610,126.912)
OP1: (97.291,117.826,124.732)
OP2: (97.944,119.544,122.938)
C4: (102.621,120.649,120.452)
O5': (99.672,118.127,123.981)
C3': (102.040,118.549,125.498)
C1': (103.376,118.045,123.629)
O4': (102.338,117.083,123.688)
C5': (100.181,117.007,124.731)
P: (98.138,118.215,123.571)
O2: (105.286,119.480,122.330)
C4': (101.656,117.182,124.961)
C2': (103.466,118.714,125.001)
O2': (104.418,118.041,125.806)
N1: (103.077,118.976,122.525)
N3: (103.875,120.480,120.872)
N4: (102.414,121.470,119.421)
C6: (101.793,119.168,122.095)
C5: (101.523,119.984,121.070)
O3': (101.943,118.610,126.912)
Image (generated by PyMOL):