Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1M5K:D13:E7
Extra
PDB:
ATOM 1 O3' G A 12 8.834 19.669 113.787 1.00 53.46 O
ATOM 2 P U A 13 9.930 20.651 114.409 1.00 56.99 P
ATOM 3 OP1 U A 13 11.250 20.065 114.105 1.00 48.71 O
ATOM 4 OP2 U A 13 9.554 20.914 115.815 1.00 57.64 O
ATOM 5 O5' U A 13 9.796 21.963 113.521 1.00 66.04 O
ATOM 6 C5' U A 13 10.141 21.911 112.143 1.00 54.15 C
ATOM 7 C4' U A 13 10.045 23.277 111.517 1.00 61.34 C
ATOM 8 O4' U A 13 8.666 23.734 111.519 1.00 67.15 O
ATOM 9 C3' U A 13 10.792 24.389 112.226 1.00 66.78 C
ATOM 10 O3' U A 13 12.181 24.349 111.914 1.00 58.89 O
ATOM 11 C2' U A 13 10.097 25.621 111.658 1.00 64.27 C
ATOM 12 O2' U A 13 10.507 25.905 110.336 1.00 60.13 O
ATOM 13 C1' U A 13 8.641 25.150 111.627 1.00 69.51 C
ATOM 14 N1 U A 13 7.890 25.506 112.839 1.00 69.95 N
ATOM 15 C2 U A 13 7.414 26.800 112.945 1.00 68.67 C
ATOM 16 O2 U A 13 7.617 27.645 112.097 1.00 70.59 O
ATOM 17 N3 U A 13 6.694 27.061 114.086 1.00 63.55 N
ATOM 18 C4 U A 13 6.417 26.175 115.110 1.00 64.63 C
ATOM 19 O4 U A 13 5.734 26.544 116.065 1.00 70.78 O
ATOM 20 C5 U A 13 6.961 24.865 114.929 1.00 59.34 C
ATOM 21 C6 U A 13 7.661 24.584 113.829 1.00 62.88 C
ATOM 22 P C A 14 13.260 24.577 113.083 1.00 66.43 P
ATOM 23 OP1 C A 14 14.618 24.290 112.563 1.00 45.57 O
ATOM 24 OP2 C A 14 12.765 23.844 114.280 1.00 66.01 O
ATOM 25 O5' C A 14 13.146 26.136 113.383 1.00 76.13 O
TER
ATOM 1 O3' A B 6 4.635 33.311 125.185 1.00 97.48 O
ATOM 2 P G B 7 3.111 33.173 124.702 1.00112.13 P
ATOM 3 OP1 G B 7 2.464 34.505 124.809 1.00104.54 O
ATOM 4 OP2 G B 7 2.526 32.009 125.424 1.00 99.53 O
ATOM 5 O5' G B 7 3.230 32.797 123.157 1.00106.54 O
ATOM 6 C5' G B 7 3.935 33.642 122.251 1.00 85.91 C
ATOM 7 C4' G B 7 4.277 32.886 120.987 1.00 95.68 C
ATOM 8 O4' G B 7 5.133 31.761 121.322 1.00 98.52 O
ATOM 9 C3' G B 7 3.114 32.263 120.226 1.00 88.61 C
ATOM 10 O3' G B 7 2.516 33.229 119.360 1.00 90.57 O
ATOM 11 C2' G B 7 3.810 31.153 119.444 1.00 87.51 C
ATOM 12 O2' G B 7 4.484 31.635 118.295 1.00 60.82 O
ATOM 13 C1' G B 7 4.854 30.675 120.456 1.00 84.55 C
ATOM 14 N9 G B 7 4.459 29.531 121.274 1.00 85.97 N
ATOM 15 C8 G B 7 4.028 29.555 122.580 1.00 88.27 C
ATOM 16 N7 G B 7 3.787 28.366 123.063 1.00 82.87 N
ATOM 17 C5 G B 7 4.065 27.504 122.010 1.00 82.09 C
ATOM 18 C6 G B 7 3.990 26.086 121.936 1.00 81.78 C
ATOM 19 O6 G B 7 3.654 25.281 122.817 1.00 84.68 O
ATOM 20 N1 G B 7 4.360 25.622 120.679 1.00 75.69 N
ATOM 21 C2 G B 7 4.754 26.411 119.630 1.00 82.02 C
ATOM 22 N2 G B 7 5.075 25.770 118.499 1.00 85.23 N
ATOM 23 N3 G B 7 4.828 27.732 119.684 1.00 83.68 N
ATOM 24 C4 G B 7 4.473 28.207 120.895 1.00 82.96 C
ATOM 25 P A B 8 1.108 32.912 118.642 1.00 99.24 P
ATOM 26 OP1 A B 8 0.261 34.131 118.699 1.00 92.63 O
ATOM 27 OP2 A B 8 0.585 31.633 119.185 1.00 92.21 O
ATOM 28 O5' A B 8 1.520 32.704 117.119 1.00 82.36 O
TER
ATOM 2 P U A 13 9.930 20.651 114.409 1.00 56.99 P
ATOM 3 OP1 U A 13 11.250 20.065 114.105 1.00 48.71 O
ATOM 4 OP2 U A 13 9.554 20.914 115.815 1.00 57.64 O
ATOM 5 O5' U A 13 9.796 21.963 113.521 1.00 66.04 O
ATOM 6 C5' U A 13 10.141 21.911 112.143 1.00 54.15 C
ATOM 7 C4' U A 13 10.045 23.277 111.517 1.00 61.34 C
ATOM 8 O4' U A 13 8.666 23.734 111.519 1.00 67.15 O
ATOM 9 C3' U A 13 10.792 24.389 112.226 1.00 66.78 C
ATOM 10 O3' U A 13 12.181 24.349 111.914 1.00 58.89 O
ATOM 11 C2' U A 13 10.097 25.621 111.658 1.00 64.27 C
ATOM 12 O2' U A 13 10.507 25.905 110.336 1.00 60.13 O
ATOM 13 C1' U A 13 8.641 25.150 111.627 1.00 69.51 C
ATOM 14 N1 U A 13 7.890 25.506 112.839 1.00 69.95 N
ATOM 15 C2 U A 13 7.414 26.800 112.945 1.00 68.67 C
ATOM 16 O2 U A 13 7.617 27.645 112.097 1.00 70.59 O
ATOM 17 N3 U A 13 6.694 27.061 114.086 1.00 63.55 N
ATOM 18 C4 U A 13 6.417 26.175 115.110 1.00 64.63 C
ATOM 19 O4 U A 13 5.734 26.544 116.065 1.00 70.78 O
ATOM 20 C5 U A 13 6.961 24.865 114.929 1.00 59.34 C
ATOM 21 C6 U A 13 7.661 24.584 113.829 1.00 62.88 C
ATOM 22 P C A 14 13.260 24.577 113.083 1.00 66.43 P
ATOM 23 OP1 C A 14 14.618 24.290 112.563 1.00 45.57 O
ATOM 24 OP2 C A 14 12.765 23.844 114.280 1.00 66.01 O
ATOM 25 O5' C A 14 13.146 26.136 113.383 1.00 76.13 O
TER
ATOM 1 O3' A B 6 4.635 33.311 125.185 1.00 97.48 O
ATOM 2 P G B 7 3.111 33.173 124.702 1.00112.13 P
ATOM 3 OP1 G B 7 2.464 34.505 124.809 1.00104.54 O
ATOM 4 OP2 G B 7 2.526 32.009 125.424 1.00 99.53 O
ATOM 5 O5' G B 7 3.230 32.797 123.157 1.00106.54 O
ATOM 6 C5' G B 7 3.935 33.642 122.251 1.00 85.91 C
ATOM 7 C4' G B 7 4.277 32.886 120.987 1.00 95.68 C
ATOM 8 O4' G B 7 5.133 31.761 121.322 1.00 98.52 O
ATOM 9 C3' G B 7 3.114 32.263 120.226 1.00 88.61 C
ATOM 10 O3' G B 7 2.516 33.229 119.360 1.00 90.57 O
ATOM 11 C2' G B 7 3.810 31.153 119.444 1.00 87.51 C
ATOM 12 O2' G B 7 4.484 31.635 118.295 1.00 60.82 O
ATOM 13 C1' G B 7 4.854 30.675 120.456 1.00 84.55 C
ATOM 14 N9 G B 7 4.459 29.531 121.274 1.00 85.97 N
ATOM 15 C8 G B 7 4.028 29.555 122.580 1.00 88.27 C
ATOM 16 N7 G B 7 3.787 28.366 123.063 1.00 82.87 N
ATOM 17 C5 G B 7 4.065 27.504 122.010 1.00 82.09 C
ATOM 18 C6 G B 7 3.990 26.086 121.936 1.00 81.78 C
ATOM 19 O6 G B 7 3.654 25.281 122.817 1.00 84.68 O
ATOM 20 N1 G B 7 4.360 25.622 120.679 1.00 75.69 N
ATOM 21 C2 G B 7 4.754 26.411 119.630 1.00 82.02 C
ATOM 22 N2 G B 7 5.075 25.770 118.499 1.00 85.23 N
ATOM 23 N3 G B 7 4.828 27.732 119.684 1.00 83.68 N
ATOM 24 C4 G B 7 4.473 28.207 120.895 1.00 82.96 C
ATOM 25 P A B 8 1.108 32.912 118.642 1.00 99.24 P
ATOM 26 OP1 A B 8 0.261 34.131 118.699 1.00 92.63 O
ATOM 27 OP2 A B 8 0.585 31.633 119.185 1.00 92.21 O
ATOM 28 O5' A B 8 1.520 32.704 117.119 1.00 82.36 O
TER
Atoms:
C4: (6.417,26.175,115.110)
N3: (6.694,27.061,114.086)
OP1: (11.250,20.065,114.105)
OP2: (9.554,20.914,115.815)
C2: (7.414,26.800,112.945)
C1': (8.641,25.150,111.627)
C3': (10.792,24.389,112.226)
O5': (9.796,21.963,113.521)
O4': (8.666,23.734,111.519)
C5': (10.141,21.911,112.143)
P: (9.930,20.651,114.409)
C4': (10.045,23.277,111.517)
C2': (10.097,25.621,111.658)
O2': (10.507,25.905,110.336)
N1: (7.890,25.506,112.839)
O4: (5.734,26.544,116.065)
O2: (7.617,27.645,112.097)
C6: (7.661,24.584,113.829)
C5: (6.961,24.865,114.929)
O3': (12.181,24.349,111.914)
N3: (6.694,27.061,114.086)
OP1: (11.250,20.065,114.105)
OP2: (9.554,20.914,115.815)
C2: (7.414,26.800,112.945)
C1': (8.641,25.150,111.627)
C3': (10.792,24.389,112.226)
O5': (9.796,21.963,113.521)
O4': (8.666,23.734,111.519)
C5': (10.141,21.911,112.143)
P: (9.930,20.651,114.409)
C4': (10.045,23.277,111.517)
C2': (10.097,25.621,111.658)
O2': (10.507,25.905,110.336)
N1: (7.890,25.506,112.839)
O4: (5.734,26.544,116.065)
O2: (7.617,27.645,112.097)
C6: (7.661,24.584,113.829)
C5: (6.961,24.865,114.929)
O3': (12.181,24.349,111.914)
OP1: (2.464,34.505,124.809)
OP2: (2.526,32.009,125.424)
C3': (3.114,32.263,120.226)
C1': (4.854,30.675,120.456)
C5': (3.935,33.642,122.251)
O6: (3.654,25.281,122.817)
O4': (5.133,31.761,121.322)
C8: (4.028,29.555,122.580)
C2: (4.754,26.411,119.630)
C6: (3.990,26.086,121.936)
C5: (4.065,27.504,122.010)
C4: (4.473,28.207,120.895)
P: (3.111,33.173,124.702)
C4': (4.277,32.886,120.987)
C2': (3.810,31.153,119.444)
O2': (4.484,31.635,118.295)
N1: (4.360,25.622,120.679)
N2: (5.075,25.770,118.499)
N3: (4.828,27.732,119.684)
N7: (3.787,28.366,123.063)
N9: (4.459,29.531,121.274)
O5': (3.230,32.797,123.157)
O3': (2.516,33.229,119.360)
OP2: (2.526,32.009,125.424)
C3': (3.114,32.263,120.226)
C1': (4.854,30.675,120.456)
C5': (3.935,33.642,122.251)
O6: (3.654,25.281,122.817)
O4': (5.133,31.761,121.322)
C8: (4.028,29.555,122.580)
C2: (4.754,26.411,119.630)
C6: (3.990,26.086,121.936)
C5: (4.065,27.504,122.010)
C4: (4.473,28.207,120.895)
P: (3.111,33.173,124.702)
C4': (4.277,32.886,120.987)
C2': (3.810,31.153,119.444)
O2': (4.484,31.635,118.295)
N1: (4.360,25.622,120.679)
N2: (5.075,25.770,118.499)
N3: (4.828,27.732,119.684)
N7: (3.787,28.366,123.063)
N9: (4.459,29.531,121.274)
O5': (3.230,32.797,123.157)
O3': (2.516,33.229,119.360)
Image (generated by PyMOL):