Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1M5O:D13:E7
Extra
PDB:
ATOM 1 P U A 13 16.139 21.052 116.965 1.00 71.85 P
ATOM 2 OP1 U A 13 17.497 20.454 116.944 1.00 67.59 O
ATOM 3 OP2 U A 13 15.563 21.514 118.254 1.00 77.32 O
ATOM 4 O5' U A 13 16.087 22.247 115.909 1.00 72.30 O
ATOM 5 C5' U A 13 16.349 22.008 114.527 1.00 66.14 C
ATOM 6 C4' U A 13 16.304 23.301 113.747 1.00 65.00 C
ATOM 7 O4' U A 13 14.938 23.780 113.642 1.00 65.15 O
ATOM 8 C3' U A 13 17.062 24.457 114.375 1.00 67.30 C
ATOM 9 O3' U A 13 18.447 24.387 114.064 1.00 60.04 O
ATOM 10 C2' U A 13 16.380 25.666 113.747 1.00 60.05 C
ATOM 11 O2' U A 13 16.840 25.945 112.440 1.00 61.88 O
ATOM 12 C1' U A 13 14.923 25.200 113.703 1.00 65.12 C
ATOM 13 N1 U A 13 14.175 25.602 114.903 1.00 68.82 N
ATOM 14 C2 U A 13 13.681 26.895 114.958 1.00 67.98 C
ATOM 15 O2 U A 13 13.828 27.699 114.053 1.00 64.53 O
ATOM 16 N3 U A 13 13.012 27.209 116.116 1.00 63.16 N
ATOM 17 C4 U A 13 12.789 26.382 117.196 1.00 63.21 C
ATOM 18 O4 U A 13 12.170 26.809 118.168 1.00 66.46 O
ATOM 19 C5 U A 13 13.325 25.064 117.061 1.00 64.89 C
ATOM 20 C6 U A 13 13.981 24.726 115.947 1.00 68.53 C
ATOM 21 P C A 14 19.528 24.744 115.196 1.00 65.82 P
ATOM 22 OP1 C A 14 20.891 24.491 114.668 1.00 73.00 O
ATOM 23 OP2 C A 14 19.095 24.079 116.451 1.00 69.37 O
ATOM 24 O5' C A 14 19.347 26.314 115.371 1.00 75.20 O
TER
ATOM 1 O3' A B 6 9.902 32.439 127.570 1.00 86.37 O
ATOM 2 P G B 7 8.421 32.320 126.957 1.00 84.05 P
ATOM 3 OP1 G B 7 7.661 33.542 127.326 1.00 90.69 O
ATOM 4 OP2 G B 7 7.892 30.982 127.335 1.00 62.77 O
ATOM 5 O5' G B 7 8.639 32.323 125.378 1.00 83.50 O
ATOM 6 C5' G B 7 9.377 33.357 124.731 1.00 93.66 C
ATOM 7 C4' G B 7 9.882 32.864 123.396 1.00 98.07 C
ATOM 8 O4' G B 7 10.744 31.719 123.626 1.00104.72 O
ATOM 9 C3' G B 7 8.801 32.362 122.450 1.00101.49 C
ATOM 10 O3' G B 7 8.327 33.438 121.642 1.00 98.30 O
ATOM 11 C2' G B 7 9.539 31.319 121.619 1.00102.89 C
ATOM 12 O2' G B 7 10.304 31.900 120.583 1.00108.11 O
ATOM 13 C1' G B 7 10.492 30.720 122.655 1.00 97.77 C
ATOM 14 N9 G B 7 10.017 29.525 123.349 1.00 92.24 N
ATOM 15 C8 G B 7 9.413 29.473 124.583 1.00 93.01 C
ATOM 16 N7 G B 7 9.148 28.255 124.974 1.00 91.12 N
ATOM 17 C5 G B 7 9.592 27.455 123.930 1.00 90.28 C
ATOM 18 C6 G B 7 9.574 26.046 123.783 1.00 89.05 C
ATOM 19 O6 G B 7 9.146 25.194 124.571 1.00 86.74 O
ATOM 20 N1 G B 7 10.123 25.651 122.569 1.00 90.55 N
ATOM 21 C2 G B 7 10.627 26.501 121.615 1.00 90.59 C
ATOM 22 N2 G B 7 11.117 25.921 120.506 1.00 87.91 N
ATOM 23 N3 G B 7 10.651 27.819 121.740 1.00 90.97 N
ATOM 24 C4 G B 7 10.121 28.224 122.914 1.00 90.83 C
ATOM 25 P A B 8 6.948 33.284 120.830 1.00 89.48 P
ATOM 26 OP1 A B 8 6.257 34.597 120.860 1.00 96.31 O
ATOM 27 OP2 A B 8 6.257 32.079 121.356 1.00 91.75 O
ATOM 28 O5' A B 8 7.407 32.993 119.330 1.00 81.33 O
TER
ATOM 2 OP1 U A 13 17.497 20.454 116.944 1.00 67.59 O
ATOM 3 OP2 U A 13 15.563 21.514 118.254 1.00 77.32 O
ATOM 4 O5' U A 13 16.087 22.247 115.909 1.00 72.30 O
ATOM 5 C5' U A 13 16.349 22.008 114.527 1.00 66.14 C
ATOM 6 C4' U A 13 16.304 23.301 113.747 1.00 65.00 C
ATOM 7 O4' U A 13 14.938 23.780 113.642 1.00 65.15 O
ATOM 8 C3' U A 13 17.062 24.457 114.375 1.00 67.30 C
ATOM 9 O3' U A 13 18.447 24.387 114.064 1.00 60.04 O
ATOM 10 C2' U A 13 16.380 25.666 113.747 1.00 60.05 C
ATOM 11 O2' U A 13 16.840 25.945 112.440 1.00 61.88 O
ATOM 12 C1' U A 13 14.923 25.200 113.703 1.00 65.12 C
ATOM 13 N1 U A 13 14.175 25.602 114.903 1.00 68.82 N
ATOM 14 C2 U A 13 13.681 26.895 114.958 1.00 67.98 C
ATOM 15 O2 U A 13 13.828 27.699 114.053 1.00 64.53 O
ATOM 16 N3 U A 13 13.012 27.209 116.116 1.00 63.16 N
ATOM 17 C4 U A 13 12.789 26.382 117.196 1.00 63.21 C
ATOM 18 O4 U A 13 12.170 26.809 118.168 1.00 66.46 O
ATOM 19 C5 U A 13 13.325 25.064 117.061 1.00 64.89 C
ATOM 20 C6 U A 13 13.981 24.726 115.947 1.00 68.53 C
ATOM 21 P C A 14 19.528 24.744 115.196 1.00 65.82 P
ATOM 22 OP1 C A 14 20.891 24.491 114.668 1.00 73.00 O
ATOM 23 OP2 C A 14 19.095 24.079 116.451 1.00 69.37 O
ATOM 24 O5' C A 14 19.347 26.314 115.371 1.00 75.20 O
TER
ATOM 1 O3' A B 6 9.902 32.439 127.570 1.00 86.37 O
ATOM 2 P G B 7 8.421 32.320 126.957 1.00 84.05 P
ATOM 3 OP1 G B 7 7.661 33.542 127.326 1.00 90.69 O
ATOM 4 OP2 G B 7 7.892 30.982 127.335 1.00 62.77 O
ATOM 5 O5' G B 7 8.639 32.323 125.378 1.00 83.50 O
ATOM 6 C5' G B 7 9.377 33.357 124.731 1.00 93.66 C
ATOM 7 C4' G B 7 9.882 32.864 123.396 1.00 98.07 C
ATOM 8 O4' G B 7 10.744 31.719 123.626 1.00104.72 O
ATOM 9 C3' G B 7 8.801 32.362 122.450 1.00101.49 C
ATOM 10 O3' G B 7 8.327 33.438 121.642 1.00 98.30 O
ATOM 11 C2' G B 7 9.539 31.319 121.619 1.00102.89 C
ATOM 12 O2' G B 7 10.304 31.900 120.583 1.00108.11 O
ATOM 13 C1' G B 7 10.492 30.720 122.655 1.00 97.77 C
ATOM 14 N9 G B 7 10.017 29.525 123.349 1.00 92.24 N
ATOM 15 C8 G B 7 9.413 29.473 124.583 1.00 93.01 C
ATOM 16 N7 G B 7 9.148 28.255 124.974 1.00 91.12 N
ATOM 17 C5 G B 7 9.592 27.455 123.930 1.00 90.28 C
ATOM 18 C6 G B 7 9.574 26.046 123.783 1.00 89.05 C
ATOM 19 O6 G B 7 9.146 25.194 124.571 1.00 86.74 O
ATOM 20 N1 G B 7 10.123 25.651 122.569 1.00 90.55 N
ATOM 21 C2 G B 7 10.627 26.501 121.615 1.00 90.59 C
ATOM 22 N2 G B 7 11.117 25.921 120.506 1.00 87.91 N
ATOM 23 N3 G B 7 10.651 27.819 121.740 1.00 90.97 N
ATOM 24 C4 G B 7 10.121 28.224 122.914 1.00 90.83 C
ATOM 25 P A B 8 6.948 33.284 120.830 1.00 89.48 P
ATOM 26 OP1 A B 8 6.257 34.597 120.860 1.00 96.31 O
ATOM 27 OP2 A B 8 6.257 32.079 121.356 1.00 91.75 O
ATOM 28 O5' A B 8 7.407 32.993 119.330 1.00 81.33 O
TER
Atoms:
C4: (12.789,26.382,117.196)
N3: (13.012,27.209,116.116)
OP1: (17.497,20.454,116.944)
OP2: (15.563,21.514,118.254)
C2: (13.681,26.895,114.958)
C1': (14.923,25.200,113.703)
C3': (17.062,24.457,114.375)
O5': (16.087,22.247,115.909)
O4': (14.938,23.780,113.642)
C5': (16.349,22.008,114.527)
P: (16.139,21.052,116.965)
C4': (16.304,23.301,113.747)
C2': (16.380,25.666,113.747)
O2': (16.840,25.945,112.440)
N1: (14.175,25.602,114.903)
O4: (12.170,26.809,118.168)
O2: (13.828,27.699,114.053)
C6: (13.981,24.726,115.947)
C5: (13.325,25.064,117.061)
O3': (18.447,24.387,114.064)
N3: (13.012,27.209,116.116)
OP1: (17.497,20.454,116.944)
OP2: (15.563,21.514,118.254)
C2: (13.681,26.895,114.958)
C1': (14.923,25.200,113.703)
C3': (17.062,24.457,114.375)
O5': (16.087,22.247,115.909)
O4': (14.938,23.780,113.642)
C5': (16.349,22.008,114.527)
P: (16.139,21.052,116.965)
C4': (16.304,23.301,113.747)
C2': (16.380,25.666,113.747)
O2': (16.840,25.945,112.440)
N1: (14.175,25.602,114.903)
O4: (12.170,26.809,118.168)
O2: (13.828,27.699,114.053)
C6: (13.981,24.726,115.947)
C5: (13.325,25.064,117.061)
O3': (18.447,24.387,114.064)
OP1: (7.661,33.542,127.326)
OP2: (7.892,30.982,127.335)
C3': (8.801,32.362,122.450)
C1': (10.492,30.720,122.655)
C5': (9.377,33.357,124.731)
O6: (9.146,25.194,124.571)
O4': (10.744,31.719,123.626)
C8: (9.413,29.473,124.583)
C2: (10.627,26.501,121.615)
C6: (9.574,26.046,123.783)
C5: (9.592,27.455,123.930)
C4: (10.121,28.224,122.914)
P: (8.421,32.320,126.957)
C4': (9.882,32.864,123.396)
C2': (9.539,31.319,121.619)
O2': (10.304,31.900,120.583)
N1: (10.123,25.651,122.569)
N2: (11.117,25.921,120.506)
N3: (10.651,27.819,121.740)
N7: (9.148,28.255,124.974)
N9: (10.017,29.525,123.349)
O5': (8.639,32.323,125.378)
O3': (8.327,33.438,121.642)
OP2: (7.892,30.982,127.335)
C3': (8.801,32.362,122.450)
C1': (10.492,30.720,122.655)
C5': (9.377,33.357,124.731)
O6: (9.146,25.194,124.571)
O4': (10.744,31.719,123.626)
C8: (9.413,29.473,124.583)
C2: (10.627,26.501,121.615)
C6: (9.574,26.046,123.783)
C5: (9.592,27.455,123.930)
C4: (10.121,28.224,122.914)
P: (8.421,32.320,126.957)
C4': (9.882,32.864,123.396)
C2': (9.539,31.319,121.619)
O2': (10.304,31.900,120.583)
N1: (10.123,25.651,122.569)
N2: (11.117,25.921,120.506)
N3: (10.651,27.819,121.740)
N7: (9.148,28.255,124.974)
N9: (10.017,29.525,123.349)
O5': (8.639,32.323,125.378)
O3': (8.327,33.438,121.642)
Image (generated by PyMOL):