ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1M5V:P1:E7

Extra

PDB:
ATOM 1 P U A 1 12.798 20.650 115.575 1.00 65.78 P
ATOM 2 OP1 U A 1 14.167 20.089 115.619 1.00 57.50 O
ATOM 3 OP2 U A 1 12.172 21.159 116.825 1.00 60.91 O
ATOM 4 O5' U A 1 12.753 21.780 114.455 1.00 63.38 O
ATOM 5 C5' U A 1 13.157 21.491 113.119 1.00 59.55 C
ATOM 6 C4' U A 1 13.195 22.755 112.298 1.00 58.76 C
ATOM 7 O4' U A 1 11.844 23.247 112.096 1.00 58.20 O
ATOM 8 C3' U A 1 13.932 23.914 112.948 1.00 60.79 C
ATOM 9 O3' U A 1 15.335 23.830 112.712 1.00 59.85 O
ATOM 10 C2' U A 1 13.298 25.115 112.262 1.00 56.15 C
ATOM 11 O2' U A 1 13.840 25.344 110.978 1.00 59.21 O
ATOM 12 C1' U A 1 11.837 24.664 112.155 1.00 59.94 C
ATOM 13 N1 U A 1 11.048 25.068 113.328 1.00 58.51 N
ATOM 14 C2 U A 1 10.551 26.358 113.360 1.00 58.83 C
ATOM 15 O2 U A 1 10.718 27.154 112.451 1.00 59.80 O
ATOM 16 N3 U A 1 9.855 26.682 114.499 1.00 55.70 N
ATOM 17 C4 U A 1 9.609 25.867 115.581 1.00 54.16 C
ATOM 18 O4 U A 1 8.964 26.303 116.533 1.00 57.89 O
ATOM 19 C5 U A 1 10.144 24.547 115.466 1.00 57.37 C
ATOM 20 C6 U A 1 10.826 24.200 114.369 1.00 58.44 C
ATOM 21 P C A 2 16.362 24.280 113.865 1.00 50.31 P
ATOM 22 OP1 C A 2 17.752 24.109 113.367 1.00 56.99 O
ATOM 23 OP2 C A 2 15.951 23.612 115.123 1.00 55.43 O
ATOM 24 O5' C A 2 16.076 25.836 114.020 1.00 58.03 O
TER

ATOM 1 O3' A B 6 6.576 32.084 125.831 1.00 79.80 O
ATOM 2 P G B 7 5.106 31.871 125.219 1.00 83.59 P
ATOM 3 OP1 G B 7 4.310 33.102 125.461 1.00 85.69 O
ATOM 4 OP2 G B 7 4.604 30.564 125.716 1.00 72.04 O
ATOM 5 O5' G B 7 5.352 31.745 123.650 1.00 80.79 O
ATOM 6 C5' G B 7 6.050 32.762 122.935 1.00 86.37 C
ATOM 7 C4' G B 7 6.571 32.211 121.630 1.00 89.77 C
ATOM 8 O4' G B 7 7.482 31.118 121.914 1.00 91.66 O
ATOM 9 C3' G B 7 5.511 31.611 120.720 1.00 89.88 C
ATOM 10 O3' G B 7 4.964 32.625 119.883 1.00 90.59 O
ATOM 11 C2' G B 7 6.304 30.581 119.923 1.00 87.50 C
ATOM 12 O2' G B 7 7.026 31.153 118.852 1.00 91.11 O
ATOM 13 C1' G B 7 7.289 30.075 120.977 1.00 85.54 C
ATOM 14 N9 G B 7 6.850 28.890 121.708 1.00 82.32 N
ATOM 15 C8 G B 7 6.296 28.850 122.964 1.00 82.63 C
ATOM 16 N7 G B 7 6.033 27.638 123.372 1.00 81.90 N
ATOM 17 C5 G B 7 6.433 26.829 122.317 1.00 82.73 C
ATOM 18 C6 G B 7 6.395 25.418 122.178 1.00 82.90 C
ATOM 19 O6 G B 7 5.986 24.573 122.986 1.00 83.15 O
ATOM 20 N1 G B 7 6.898 25.014 120.945 1.00 81.81 N
ATOM 21 C2 G B 7 7.377 25.856 119.970 1.00 82.09 C
ATOM 22 N2 G B 7 7.822 25.273 118.843 1.00 80.96 N
ATOM 23 N3 G B 7 7.418 27.172 120.090 1.00 82.18 N
ATOM 24 C4 G B 7 6.934 27.587 121.280 1.00 81.88 C
ATOM 25 P A B 8 3.590 32.356 119.097 1.00 84.71 P
ATOM 26 OP1 A B 8 2.729 33.557 119.246 1.00 84.19 O
ATOM 27 OP2 A B 8 3.086 31.029 119.542 1.00 77.42 O
ATOM 28 O5' A B 8 4.037 32.257 117.570 1.00 78.34 O
TER

Atoms:
C4: (9.609,25.867,115.581)
N3: (9.855,26.682,114.499)
OP1: (14.167,20.089,115.619)
OP2: (12.172,21.159,116.825)
C2: (10.551,26.358,113.360)
C1': (11.837,24.664,112.155)
C3': (13.932,23.914,112.948)
O5': (12.753,21.780,114.455)
O4': (11.844,23.247,112.096)
C5': (13.157,21.491,113.119)
P: (12.798,20.650,115.575)
C4': (13.195,22.755,112.298)
C2': (13.298,25.115,112.262)
O2': (13.840,25.344,110.978)
N1: (11.048,25.068,113.328)
O4: (8.964,26.303,116.533)
O2: (10.718,27.154,112.451)
C6: (10.826,24.200,114.369)
C5: (10.144,24.547,115.466)
O3': (15.335,23.830,112.712)
OP1: (4.310,33.102,125.461)
OP2: (4.604,30.564,125.716)
C3': (5.511,31.611,120.720)
C1': (7.289,30.075,120.977)
C5': (6.050,32.762,122.935)
O6: (5.986,24.573,122.986)
O4': (7.482,31.118,121.914)
C8: (6.296,28.850,122.964)
C2: (7.377,25.856,119.970)
C6: (6.395,25.418,122.178)
C5: (6.433,26.829,122.317)
C4: (6.934,27.587,121.280)
P: (5.106,31.871,125.219)
C4': (6.571,32.211,121.630)
C2': (6.304,30.581,119.923)
O2': (7.026,31.153,118.852)
N1: (6.898,25.014,120.945)
N2: (7.822,25.273,118.843)
N3: (7.418,27.172,120.090)
N7: (6.033,27.638,123.372)
N9: (6.850,28.890,121.708)
O5': (5.352,31.745,123.650)
O3': (4.964,32.625,119.883)
Image (generated by PyMOL):
PyMOL image
show in jmol