Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQM:0574:0573
Extra
PDB:
ATOM 1 O3' C A 573 -10.665 83.044 116.380 1.00 74.91 O
ATOM 2 P C A 574 -10.616 83.793 114.957 1.00 75.81 P
ATOM 3 OP1 C A 574 -11.582 83.119 114.051 1.00 74.66 O
ATOM 4 OP2 C A 574 -9.190 83.900 114.547 1.00 77.27 O
ATOM 5 O5' C A 574 -11.165 85.254 115.283 1.00 73.15 O
ATOM 6 C5' C A 574 -12.511 85.446 115.738 1.00 71.78 C
ATOM 7 C4' C A 574 -12.686 86.841 116.280 1.00 72.43 C
ATOM 8 O4' C A 574 -11.824 87.032 117.432 1.00 73.51 O
ATOM 9 C3' C A 574 -12.300 87.964 115.337 1.00 73.34 C
ATOM 10 O3' C A 574 -13.356 88.224 114.423 1.00 75.41 O
ATOM 11 C2' C A 574 -12.033 89.115 116.303 1.00 73.38 C
ATOM 12 O2' C A 574 -13.205 89.745 116.776 1.00 73.05 O
ATOM 13 C1' C A 574 -11.367 88.379 117.470 1.00 72.72 C
ATOM 14 N1 C A 574 -9.888 88.377 117.406 1.00 71.74 N
ATOM 15 C2 C A 574 -9.172 89.462 117.961 1.00 71.35 C
ATOM 16 O2 C A 574 -9.798 90.404 118.491 1.00 69.81 O
ATOM 17 N3 C A 574 -7.819 89.456 117.898 1.00 70.57 N
ATOM 18 C4 C A 574 -7.181 88.438 117.312 1.00 70.90 C
ATOM 19 N4 C A 574 -5.844 88.478 117.267 1.00 70.67 N
ATOM 20 C5 C A 574 -7.880 87.332 116.743 1.00 70.16 C
ATOM 21 C6 C A 574 -9.215 87.341 116.813 1.00 70.54 C
ATOM 22 P A A 575 -13.026 88.712 112.927 1.00 75.97 P
ATOM 23 OP1 A A 575 -12.438 90.074 113.012 1.00 76.42 O
ATOM 24 OP2 A A 575 -14.256 88.493 112.123 1.00 76.76 O
ATOM 25 O5' A A 575 -11.924 87.694 112.388 1.00 74.07 O
TER
ATOM 1 O3' U B 572 -5.296 80.567 118.242 1.00 77.51 O
ATOM 2 P C B 573 -5.828 81.379 116.960 1.00 77.87 P
ATOM 3 OP1 C B 573 -6.223 80.372 115.940 1.00 75.88 O
ATOM 4 OP2 C B 573 -4.803 82.402 116.625 1.00 79.41 O
ATOM 5 O5' C B 573 -7.139 82.128 117.477 1.00 75.84 O
ATOM 6 C5' C B 573 -8.324 81.381 117.818 1.00 74.30 C
ATOM 7 C4' C B 573 -9.418 82.298 118.322 1.00 73.03 C
ATOM 8 O4' C B 573 -9.006 82.936 119.554 1.00 72.06 O
ATOM 9 C3' C B 573 -9.800 83.464 117.431 1.00 73.56 C
ATOM 10 O3' C B 573 -10.665 83.044 116.380 1.00 74.91 O
ATOM 11 C2' C B 573 -10.498 84.404 118.410 1.00 74.03 C
ATOM 12 O2' C B 573 -11.849 84.069 118.661 1.00 76.18 O
ATOM 13 C1' C B 573 -9.689 84.172 119.689 1.00 73.19 C
ATOM 14 N1 C B 573 -8.715 85.235 119.990 1.00 74.05 N
ATOM 15 C2 C B 573 -9.149 86.366 120.701 1.00 74.57 C
ATOM 16 O2 C B 573 -10.338 86.438 121.057 1.00 72.58 O
ATOM 17 N3 C B 573 -8.260 87.350 120.981 1.00 75.20 N
ATOM 18 C4 C B 573 -6.989 87.235 120.585 1.00 75.05 C
ATOM 19 N4 C B 573 -6.148 88.227 120.889 1.00 75.07 N
ATOM 20 C5 C B 573 -6.523 86.097 119.861 1.00 73.95 C
ATOM 21 C6 C B 573 -7.409 85.132 119.588 1.00 74.45 C
ATOM 22 P C B 574 -10.616 83.793 114.957 1.00 75.81 P
ATOM 23 OP1 C B 574 -11.582 83.119 114.051 1.00 74.66 O
ATOM 24 OP2 C B 574 -9.190 83.900 114.547 1.00 77.27 O
ATOM 25 O5' C B 574 -11.165 85.254 115.283 1.00 73.15 O
TER
ATOM 2 P C A 574 -10.616 83.793 114.957 1.00 75.81 P
ATOM 3 OP1 C A 574 -11.582 83.119 114.051 1.00 74.66 O
ATOM 4 OP2 C A 574 -9.190 83.900 114.547 1.00 77.27 O
ATOM 5 O5' C A 574 -11.165 85.254 115.283 1.00 73.15 O
ATOM 6 C5' C A 574 -12.511 85.446 115.738 1.00 71.78 C
ATOM 7 C4' C A 574 -12.686 86.841 116.280 1.00 72.43 C
ATOM 8 O4' C A 574 -11.824 87.032 117.432 1.00 73.51 O
ATOM 9 C3' C A 574 -12.300 87.964 115.337 1.00 73.34 C
ATOM 10 O3' C A 574 -13.356 88.224 114.423 1.00 75.41 O
ATOM 11 C2' C A 574 -12.033 89.115 116.303 1.00 73.38 C
ATOM 12 O2' C A 574 -13.205 89.745 116.776 1.00 73.05 O
ATOM 13 C1' C A 574 -11.367 88.379 117.470 1.00 72.72 C
ATOM 14 N1 C A 574 -9.888 88.377 117.406 1.00 71.74 N
ATOM 15 C2 C A 574 -9.172 89.462 117.961 1.00 71.35 C
ATOM 16 O2 C A 574 -9.798 90.404 118.491 1.00 69.81 O
ATOM 17 N3 C A 574 -7.819 89.456 117.898 1.00 70.57 N
ATOM 18 C4 C A 574 -7.181 88.438 117.312 1.00 70.90 C
ATOM 19 N4 C A 574 -5.844 88.478 117.267 1.00 70.67 N
ATOM 20 C5 C A 574 -7.880 87.332 116.743 1.00 70.16 C
ATOM 21 C6 C A 574 -9.215 87.341 116.813 1.00 70.54 C
ATOM 22 P A A 575 -13.026 88.712 112.927 1.00 75.97 P
ATOM 23 OP1 A A 575 -12.438 90.074 113.012 1.00 76.42 O
ATOM 24 OP2 A A 575 -14.256 88.493 112.123 1.00 76.76 O
ATOM 25 O5' A A 575 -11.924 87.694 112.388 1.00 74.07 O
TER
ATOM 1 O3' U B 572 -5.296 80.567 118.242 1.00 77.51 O
ATOM 2 P C B 573 -5.828 81.379 116.960 1.00 77.87 P
ATOM 3 OP1 C B 573 -6.223 80.372 115.940 1.00 75.88 O
ATOM 4 OP2 C B 573 -4.803 82.402 116.625 1.00 79.41 O
ATOM 5 O5' C B 573 -7.139 82.128 117.477 1.00 75.84 O
ATOM 6 C5' C B 573 -8.324 81.381 117.818 1.00 74.30 C
ATOM 7 C4' C B 573 -9.418 82.298 118.322 1.00 73.03 C
ATOM 8 O4' C B 573 -9.006 82.936 119.554 1.00 72.06 O
ATOM 9 C3' C B 573 -9.800 83.464 117.431 1.00 73.56 C
ATOM 10 O3' C B 573 -10.665 83.044 116.380 1.00 74.91 O
ATOM 11 C2' C B 573 -10.498 84.404 118.410 1.00 74.03 C
ATOM 12 O2' C B 573 -11.849 84.069 118.661 1.00 76.18 O
ATOM 13 C1' C B 573 -9.689 84.172 119.689 1.00 73.19 C
ATOM 14 N1 C B 573 -8.715 85.235 119.990 1.00 74.05 N
ATOM 15 C2 C B 573 -9.149 86.366 120.701 1.00 74.57 C
ATOM 16 O2 C B 573 -10.338 86.438 121.057 1.00 72.58 O
ATOM 17 N3 C B 573 -8.260 87.350 120.981 1.00 75.20 N
ATOM 18 C4 C B 573 -6.989 87.235 120.585 1.00 75.05 C
ATOM 19 N4 C B 573 -6.148 88.227 120.889 1.00 75.07 N
ATOM 20 C5 C B 573 -6.523 86.097 119.861 1.00 73.95 C
ATOM 21 C6 C B 573 -7.409 85.132 119.588 1.00 74.45 C
ATOM 22 P C B 574 -10.616 83.793 114.957 1.00 75.81 P
ATOM 23 OP1 C B 574 -11.582 83.119 114.051 1.00 74.66 O
ATOM 24 OP2 C B 574 -9.190 83.900 114.547 1.00 77.27 O
ATOM 25 O5' C B 574 -11.165 85.254 115.283 1.00 73.15 O
TER
Atoms:
C2: (-9.172,89.462,117.961)
OP1: (-11.582,83.119,114.051)
OP2: (-9.190,83.900,114.547)
C4: (-7.181,88.438,117.312)
O5': (-11.165,85.254,115.283)
C3': (-12.300,87.964,115.337)
C1': (-11.367,88.379,117.470)
O4': (-11.824,87.032,117.432)
C5': (-12.511,85.446,115.738)
P: (-10.616,83.793,114.957)
O2: (-9.798,90.404,118.491)
C4': (-12.686,86.841,116.280)
C2': (-12.033,89.115,116.303)
O2': (-13.205,89.745,116.776)
N1: (-9.888,88.377,117.406)
N3: (-7.819,89.456,117.898)
N4: (-5.844,88.478,117.267)
C6: (-9.215,87.341,116.813)
C5: (-7.880,87.332,116.743)
O3': (-13.356,88.224,114.423)
OP1: (-11.582,83.119,114.051)
OP2: (-9.190,83.900,114.547)
C4: (-7.181,88.438,117.312)
O5': (-11.165,85.254,115.283)
C3': (-12.300,87.964,115.337)
C1': (-11.367,88.379,117.470)
O4': (-11.824,87.032,117.432)
C5': (-12.511,85.446,115.738)
P: (-10.616,83.793,114.957)
O2: (-9.798,90.404,118.491)
C4': (-12.686,86.841,116.280)
C2': (-12.033,89.115,116.303)
O2': (-13.205,89.745,116.776)
N1: (-9.888,88.377,117.406)
N3: (-7.819,89.456,117.898)
N4: (-5.844,88.478,117.267)
C6: (-9.215,87.341,116.813)
C5: (-7.880,87.332,116.743)
O3': (-13.356,88.224,114.423)
C2: (-9.149,86.366,120.701)
OP1: (-6.223,80.372,115.940)
OP2: (-4.803,82.402,116.625)
C4: (-6.989,87.235,120.585)
O5': (-7.139,82.128,117.477)
C3': (-9.800,83.464,117.431)
C1': (-9.689,84.172,119.689)
O4': (-9.006,82.936,119.554)
C5': (-8.324,81.381,117.818)
P: (-5.828,81.379,116.960)
O2: (-10.338,86.438,121.057)
C4': (-9.418,82.298,118.322)
C2': (-10.498,84.404,118.410)
O2': (-11.849,84.069,118.661)
N1: (-8.715,85.235,119.990)
N3: (-8.260,87.350,120.981)
N4: (-6.148,88.227,120.889)
C6: (-7.409,85.132,119.588)
C5: (-6.523,86.097,119.861)
O3': (-10.665,83.044,116.380)
OP1: (-6.223,80.372,115.940)
OP2: (-4.803,82.402,116.625)
C4: (-6.989,87.235,120.585)
O5': (-7.139,82.128,117.477)
C3': (-9.800,83.464,117.431)
C1': (-9.689,84.172,119.689)
O4': (-9.006,82.936,119.554)
C5': (-8.324,81.381,117.818)
P: (-5.828,81.379,116.960)
O2: (-10.338,86.438,121.057)
C4': (-9.418,82.298,118.322)
C2': (-10.498,84.404,118.410)
O2': (-11.849,84.069,118.661)
N1: (-8.715,85.235,119.990)
N3: (-8.260,87.350,120.981)
N4: (-6.148,88.227,120.889)
C6: (-7.409,85.132,119.588)
C5: (-6.523,86.097,119.861)
O3': (-10.665,83.044,116.380)
Image (generated by PyMOL):