Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1M5V:E16:E15
Extra
PDB:
ATOM 1 O3' C A 15 -9.833 18.829 131.381 1.00110.01 O
ATOM 2 P C A 16 -8.659 17.968 130.700 1.00106.19 P
ATOM 3 OP1 C A 16 -7.397 18.260 131.428 1.00105.41 O
ATOM 4 OP2 C A 16 -8.735 18.213 129.238 1.00108.22 O
ATOM 5 O5' C A 16 -9.068 16.451 130.979 1.00 99.21 O
ATOM 6 C5' C A 16 -8.830 15.857 132.251 1.00 92.44 C
ATOM 7 C4' C A 16 -9.300 14.419 132.268 1.00 93.61 C
ATOM 8 O4' C A 16 -10.734 14.368 132.038 1.00 93.78 O
ATOM 9 C3' C A 16 -8.755 13.491 131.194 1.00 97.40 C
ATOM 10 O3' C A 16 -7.448 13.018 131.491 1.00 97.23 O
ATOM 11 C2' C A 16 -9.766 12.352 131.232 1.00 97.41 C
ATOM 12 O2' C A 16 -9.557 11.452 132.304 1.00 94.96 O
ATOM 13 C1' C A 16 -11.072 13.121 131.441 1.00 94.89 C
ATOM 14 N1 C A 16 -11.748 13.372 130.160 1.00 91.63 N
ATOM 15 C2 C A 16 -12.566 12.370 129.629 1.00 90.49 C
ATOM 16 O2 C A 16 -12.712 11.314 130.267 1.00 88.73 O
ATOM 17 N3 C A 16 -13.175 12.576 128.439 1.00 91.14 N
ATOM 18 C4 C A 16 -12.991 13.726 127.787 1.00 91.34 C
ATOM 19 N4 C A 16 -13.608 13.885 126.614 1.00 91.73 N
ATOM 20 C5 C A 16 -12.167 14.765 128.308 1.00 90.36 C
ATOM 21 C6 C A 16 -11.572 14.549 129.488 1.00 90.84 C
ATOM 22 P A A 17 -6.518 12.469 130.302 1.00 90.95 P
ATOM 23 OP1 A A 17 -5.193 12.118 130.874 1.00100.21 O
ATOM 24 OP2 A A 17 -6.603 13.458 129.196 1.00 87.79 O
ATOM 25 O5' A A 17 -7.226 11.119 129.832 1.00 86.84 O
TER
ATOM 1 O3' A B 14 -12.874 23.243 128.158 1.00107.73 O
ATOM 2 P C B 15 -11.660 22.210 127.923 1.00108.45 P
ATOM 3 OP1 C B 15 -10.402 22.922 128.263 1.00106.66 O
ATOM 4 OP2 C B 15 -11.824 21.619 126.570 1.00105.98 O
ATOM 5 O5' C B 15 -11.892 21.061 129.006 1.00104.90 O
ATOM 6 C5' C B 15 -11.663 21.307 130.390 1.00102.24 C
ATOM 7 C4' C B 15 -11.919 20.058 131.204 1.00105.10 C
ATOM 8 O4' C B 15 -13.301 19.646 131.047 1.00106.48 O
ATOM 9 C3' C B 15 -11.136 18.815 130.812 1.00105.67 C
ATOM 10 O3' C B 15 -9.833 18.829 131.381 1.00110.01 O
ATOM 11 C2' C B 15 -11.980 17.702 131.424 1.00105.86 C
ATOM 12 O2' C B 15 -11.735 17.517 132.802 1.00102.36 O
ATOM 13 C1' C B 15 -13.397 18.239 131.218 1.00104.80 C
ATOM 14 N1 C B 15 -14.064 17.661 130.040 1.00102.27 N
ATOM 15 C2 C B 15 -14.647 16.390 130.153 1.00100.24 C
ATOM 16 O2 C B 15 -14.585 15.795 131.241 1.00 97.49 O
ATOM 17 N3 C B 15 -15.258 15.846 129.077 1.00 99.90 N
ATOM 18 C4 C B 15 -15.301 16.518 127.924 1.00100.61 C
ATOM 19 N4 C B 15 -15.915 15.942 126.889 1.00101.56 N
ATOM 20 C5 C B 15 -14.716 17.811 127.781 1.00101.00 C
ATOM 21 C6 C B 15 -14.115 18.340 128.854 1.00101.84 C
ATOM 22 P C B 16 -8.659 17.968 130.700 1.00106.19 P
ATOM 23 OP1 C B 16 -7.397 18.260 131.428 1.00105.41 O
ATOM 24 OP2 C B 16 -8.735 18.213 129.238 1.00108.22 O
ATOM 25 O5' C B 16 -9.068 16.451 130.979 1.00 99.21 O
TER
ATOM 2 P C A 16 -8.659 17.968 130.700 1.00106.19 P
ATOM 3 OP1 C A 16 -7.397 18.260 131.428 1.00105.41 O
ATOM 4 OP2 C A 16 -8.735 18.213 129.238 1.00108.22 O
ATOM 5 O5' C A 16 -9.068 16.451 130.979 1.00 99.21 O
ATOM 6 C5' C A 16 -8.830 15.857 132.251 1.00 92.44 C
ATOM 7 C4' C A 16 -9.300 14.419 132.268 1.00 93.61 C
ATOM 8 O4' C A 16 -10.734 14.368 132.038 1.00 93.78 O
ATOM 9 C3' C A 16 -8.755 13.491 131.194 1.00 97.40 C
ATOM 10 O3' C A 16 -7.448 13.018 131.491 1.00 97.23 O
ATOM 11 C2' C A 16 -9.766 12.352 131.232 1.00 97.41 C
ATOM 12 O2' C A 16 -9.557 11.452 132.304 1.00 94.96 O
ATOM 13 C1' C A 16 -11.072 13.121 131.441 1.00 94.89 C
ATOM 14 N1 C A 16 -11.748 13.372 130.160 1.00 91.63 N
ATOM 15 C2 C A 16 -12.566 12.370 129.629 1.00 90.49 C
ATOM 16 O2 C A 16 -12.712 11.314 130.267 1.00 88.73 O
ATOM 17 N3 C A 16 -13.175 12.576 128.439 1.00 91.14 N
ATOM 18 C4 C A 16 -12.991 13.726 127.787 1.00 91.34 C
ATOM 19 N4 C A 16 -13.608 13.885 126.614 1.00 91.73 N
ATOM 20 C5 C A 16 -12.167 14.765 128.308 1.00 90.36 C
ATOM 21 C6 C A 16 -11.572 14.549 129.488 1.00 90.84 C
ATOM 22 P A A 17 -6.518 12.469 130.302 1.00 90.95 P
ATOM 23 OP1 A A 17 -5.193 12.118 130.874 1.00100.21 O
ATOM 24 OP2 A A 17 -6.603 13.458 129.196 1.00 87.79 O
ATOM 25 O5' A A 17 -7.226 11.119 129.832 1.00 86.84 O
TER
ATOM 1 O3' A B 14 -12.874 23.243 128.158 1.00107.73 O
ATOM 2 P C B 15 -11.660 22.210 127.923 1.00108.45 P
ATOM 3 OP1 C B 15 -10.402 22.922 128.263 1.00106.66 O
ATOM 4 OP2 C B 15 -11.824 21.619 126.570 1.00105.98 O
ATOM 5 O5' C B 15 -11.892 21.061 129.006 1.00104.90 O
ATOM 6 C5' C B 15 -11.663 21.307 130.390 1.00102.24 C
ATOM 7 C4' C B 15 -11.919 20.058 131.204 1.00105.10 C
ATOM 8 O4' C B 15 -13.301 19.646 131.047 1.00106.48 O
ATOM 9 C3' C B 15 -11.136 18.815 130.812 1.00105.67 C
ATOM 10 O3' C B 15 -9.833 18.829 131.381 1.00110.01 O
ATOM 11 C2' C B 15 -11.980 17.702 131.424 1.00105.86 C
ATOM 12 O2' C B 15 -11.735 17.517 132.802 1.00102.36 O
ATOM 13 C1' C B 15 -13.397 18.239 131.218 1.00104.80 C
ATOM 14 N1 C B 15 -14.064 17.661 130.040 1.00102.27 N
ATOM 15 C2 C B 15 -14.647 16.390 130.153 1.00100.24 C
ATOM 16 O2 C B 15 -14.585 15.795 131.241 1.00 97.49 O
ATOM 17 N3 C B 15 -15.258 15.846 129.077 1.00 99.90 N
ATOM 18 C4 C B 15 -15.301 16.518 127.924 1.00100.61 C
ATOM 19 N4 C B 15 -15.915 15.942 126.889 1.00101.56 N
ATOM 20 C5 C B 15 -14.716 17.811 127.781 1.00101.00 C
ATOM 21 C6 C B 15 -14.115 18.340 128.854 1.00101.84 C
ATOM 22 P C B 16 -8.659 17.968 130.700 1.00106.19 P
ATOM 23 OP1 C B 16 -7.397 18.260 131.428 1.00105.41 O
ATOM 24 OP2 C B 16 -8.735 18.213 129.238 1.00108.22 O
ATOM 25 O5' C B 16 -9.068 16.451 130.979 1.00 99.21 O
TER
Atoms:
C2: (-12.566,12.370,129.629)
OP1: (-7.397,18.260,131.428)
OP2: (-8.735,18.213,129.238)
C4: (-12.991,13.726,127.787)
O5': (-9.068,16.451,130.979)
C3': (-8.755,13.491,131.194)
C1': (-11.072,13.121,131.441)
O4': (-10.734,14.368,132.038)
C5': (-8.830,15.857,132.251)
P: (-8.659,17.968,130.700)
O2: (-12.712,11.314,130.267)
C4': (-9.300,14.419,132.268)
C2': (-9.766,12.352,131.232)
O2': (-9.557,11.452,132.304)
N1: (-11.748,13.372,130.160)
N3: (-13.175,12.576,128.439)
N4: (-13.608,13.885,126.614)
C6: (-11.572,14.549,129.488)
C5: (-12.167,14.765,128.308)
O3': (-7.448,13.018,131.491)
OP1: (-7.397,18.260,131.428)
OP2: (-8.735,18.213,129.238)
C4: (-12.991,13.726,127.787)
O5': (-9.068,16.451,130.979)
C3': (-8.755,13.491,131.194)
C1': (-11.072,13.121,131.441)
O4': (-10.734,14.368,132.038)
C5': (-8.830,15.857,132.251)
P: (-8.659,17.968,130.700)
O2: (-12.712,11.314,130.267)
C4': (-9.300,14.419,132.268)
C2': (-9.766,12.352,131.232)
O2': (-9.557,11.452,132.304)
N1: (-11.748,13.372,130.160)
N3: (-13.175,12.576,128.439)
N4: (-13.608,13.885,126.614)
C6: (-11.572,14.549,129.488)
C5: (-12.167,14.765,128.308)
O3': (-7.448,13.018,131.491)
C2: (-14.647,16.390,130.153)
OP1: (-10.402,22.922,128.263)
OP2: (-11.824,21.619,126.570)
C4: (-15.301,16.518,127.924)
O5': (-11.892,21.061,129.006)
C3': (-11.136,18.815,130.812)
C1': (-13.397,18.239,131.218)
O4': (-13.301,19.646,131.047)
C5': (-11.663,21.307,130.390)
P: (-11.660,22.210,127.923)
O2: (-14.585,15.795,131.241)
C4': (-11.919,20.058,131.204)
C2': (-11.980,17.702,131.424)
O2': (-11.735,17.517,132.802)
N1: (-14.064,17.661,130.040)
N3: (-15.258,15.846,129.077)
N4: (-15.915,15.942,126.889)
C6: (-14.115,18.340,128.854)
C5: (-14.716,17.811,127.781)
O3': (-9.833,18.829,131.381)
OP1: (-10.402,22.922,128.263)
OP2: (-11.824,21.619,126.570)
C4: (-15.301,16.518,127.924)
O5': (-11.892,21.061,129.006)
C3': (-11.136,18.815,130.812)
C1': (-13.397,18.239,131.218)
O4': (-13.301,19.646,131.047)
C5': (-11.663,21.307,130.390)
P: (-11.660,22.210,127.923)
O2: (-14.585,15.795,131.241)
C4': (-11.919,20.058,131.204)
C2': (-11.980,17.702,131.424)
O2': (-11.735,17.517,132.802)
N1: (-14.064,17.661,130.040)
N3: (-15.258,15.846,129.077)
N4: (-15.915,15.942,126.889)
C6: (-14.115,18.340,128.854)
C5: (-14.716,17.811,127.781)
O3': (-9.833,18.829,131.381)
Image (generated by PyMOL):