ClaRNA

Doublet info:

Details

Nucleotide types: CC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J03:B42:B41

Extra

PDB:
ATOM 1 O3' C A 41 -167.067 -18.883 46.795 1.00 87.86 O
ATOM 2 P C A 42 -168.036 -20.013 47.421 1.00 47.11 P
ATOM 3 OP1 C A 42 -168.335 -19.617 48.824 1.00 49.05 O
ATOM 4 OP2 C A 42 -167.444 -21.356 47.131 1.00 48.95 O
ATOM 5 O5' C A 42 -169.372 -19.890 46.572 1.00 62.16 O
ATOM 6 C5' C A 42 -170.313 -20.968 46.515 1.00 62.16 C
ATOM 7 C4' C A 42 -171.021 -20.956 45.186 1.00 62.16 C
ATOM 8 O4' C A 42 -170.034 -20.983 44.128 1.00 62.16 O
ATOM 9 C3' C A 42 -171.940 -22.139 44.925 1.00 62.16 C
ATOM 10 O3' C A 42 -173.252 -21.857 45.417 1.00 62.16 O
ATOM 11 C2' C A 42 -171.930 -22.246 43.400 1.00 62.16 C
ATOM 12 O2' C A 42 -172.884 -21.411 42.765 1.00 62.16 O
ATOM 13 C1' C A 42 -170.514 -21.766 43.054 1.00 62.16 C
ATOM 14 N1 C A 42 -169.552 -22.850 42.813 1.00 50.84 N
ATOM 15 C2 C A 42 -169.782 -23.737 41.753 1.00 50.79 C
ATOM 16 O2 C A 42 -170.804 -23.595 41.052 1.00 50.77 O
ATOM 17 N3 C A 42 -168.889 -24.726 41.521 1.00 50.78 N
ATOM 18 C4 C A 42 -167.810 -24.850 42.297 1.00 50.82 C
ATOM 19 N4 C A 42 -166.953 -25.837 42.023 1.00 50.82 N
ATOM 20 C5 C A 42 -167.560 -23.967 43.386 1.00 50.82 C
ATOM 21 C6 C A 42 -168.446 -22.992 43.605 1.00 50.83 C
ATOM 22 P G A 43 -173.730 -22.449 46.835 1.00 87.67 P
ATOM 23 OP1 G A 43 -174.732 -21.496 47.350 1.00 52.78 O
ATOM 24 OP2 G A 43 -172.532 -22.756 47.655 1.00 52.77 O
ATOM 25 O5' G A 43 -174.487 -23.807 46.473 1.00 71.79 O
TER

ATOM 1 O3' U B 40 -161.642 -20.497 47.359 1.00 63.35 O
ATOM 2 P C B 41 -162.287 -19.022 47.413 1.00 70.98 P
ATOM 3 OP1 C B 41 -161.210 -18.040 47.120 1.00 24.03 O
ATOM 4 OP2 C B 41 -163.005 -18.914 48.695 1.00 24.11 O
ATOM 5 O5' C B 41 -163.377 -19.007 46.242 1.00 87.86 O
ATOM 6 C5' C B 41 -164.074 -17.781 45.930 1.00 87.86 C
ATOM 7 C4' C B 41 -165.390 -18.028 45.202 1.00 87.86 C
ATOM 8 O4' C B 41 -165.197 -18.234 43.781 1.00 87.86 O
ATOM 9 C3' C B 41 -166.327 -19.160 45.602 1.00 87.86 C
ATOM 10 O3' C B 41 -167.067 -18.883 46.795 1.00 87.86 O
ATOM 11 C2' C B 41 -167.280 -19.214 44.405 1.00 87.86 C
ATOM 12 O2' C B 41 -168.338 -18.283 44.508 1.00 87.86 O
ATOM 13 C1' C B 41 -166.383 -18.787 43.240 1.00 87.86 C
ATOM 14 N1 C B 41 -166.066 -19.911 42.340 1.00 51.32 N
ATOM 15 C2 C B 41 -166.799 -20.048 41.148 1.00 51.32 C
ATOM 16 O2 C B 41 -167.645 -19.193 40.857 1.00 51.28 O
ATOM 17 N3 C B 41 -166.562 -21.109 40.348 1.00 51.37 N
ATOM 18 C4 C B 41 -165.635 -22.008 40.686 1.00 51.38 C
ATOM 19 N4 C B 41 -165.449 -23.051 39.879 1.00 51.34 N
ATOM 20 C5 C B 41 -164.858 -21.881 41.872 1.00 51.40 C
ATOM 21 C6 C B 41 -165.102 -20.826 42.662 1.00 51.40 C
ATOM 22 P C B 42 -168.036 -20.013 47.421 1.00 47.11 P
ATOM 23 OP1 C B 42 -168.335 -19.617 48.824 1.00 49.05 O
ATOM 24 OP2 C B 42 -167.444 -21.356 47.131 1.00 48.95 O
ATOM 25 O5' C B 42 -169.372 -19.890 46.572 1.00 62.16 O
TER

Atoms:
C2: (-169.782,-23.737,41.753)
OP1: (-168.335,-19.617,48.824)
OP2: (-167.444,-21.356,47.131)
C4: (-167.810,-24.850,42.297)
O5': (-169.372,-19.890,46.572)
C3': (-171.940,-22.139,44.925)
C1': (-170.514,-21.766,43.054)
O4': (-170.034,-20.983,44.128)
C5': (-170.313,-20.968,46.515)
P: (-168.036,-20.013,47.421)
O2: (-170.804,-23.595,41.052)
C4': (-171.021,-20.956,45.186)
C2': (-171.930,-22.246,43.400)
O2': (-172.884,-21.411,42.765)
N1: (-169.552,-22.850,42.813)
N3: (-168.889,-24.726,41.521)
N4: (-166.953,-25.837,42.023)
C6: (-168.446,-22.992,43.605)
C5: (-167.560,-23.967,43.386)
O3': (-173.252,-21.857,45.417)
C2: (-166.799,-20.048,41.148)
OP1: (-161.210,-18.040,47.120)
OP2: (-163.005,-18.914,48.695)
C4: (-165.635,-22.008,40.686)
O5': (-163.377,-19.007,46.242)
C3': (-166.327,-19.160,45.602)
C1': (-166.383,-18.787,43.240)
O4': (-165.197,-18.234,43.781)
C5': (-164.074,-17.781,45.930)
P: (-162.287,-19.022,47.413)
O2: (-167.645,-19.193,40.857)
C4': (-165.390,-18.028,45.202)
C2': (-167.280,-19.214,44.405)
O2': (-168.338,-18.283,44.508)
N1: (-166.066,-19.911,42.340)
N3: (-166.562,-21.109,40.348)
N4: (-165.449,-23.051,39.879)
C6: (-165.102,-20.826,42.662)
C5: (-164.858,-21.881,41.872)
O3': (-167.067,-18.883,46.795)
Image (generated by PyMOL):
PyMOL image
show in jmol