ClaRNA

Doublet info:

Details

Nucleotide types: UU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3F1H:A1416:A1415

Extra

PDB:
ATOM 1 O3' U A1415 -8.582 -48.416 21.679 1.00 72.42 O
ATOM 2 P U A1416 -8.078 -49.940 21.684 1.00 43.68 P
ATOM 3 OP1 U A1416 -6.641 -49.905 22.034 1.00 63.89 O
ATOM 4 OP2 U A1416 -8.502 -50.616 20.430 1.00 44.05 O
ATOM 5 O5' U A1416 -8.854 -50.557 22.940 1.00 52.96 O
ATOM 6 C5' U A1416 -8.665 -49.959 24.217 1.00 50.97 C
ATOM 7 C4' U A1416 -9.119 -50.865 25.345 1.00 51.24 C
ATOM 8 O4' U A1416 -10.562 -50.985 25.303 1.00 60.25 O
ATOM 9 C3' U A1416 -8.569 -52.287 25.273 1.00 57.79 C
ATOM 10 O3' U A1416 -8.114 -52.738 26.564 1.00 60.29 O
ATOM 11 C2' U A1416 -9.751 -53.072 24.690 1.00 60.12 C
ATOM 12 O2' U A1416 -9.832 -54.440 25.033 1.00 51.69 O
ATOM 13 C1' U A1416 -10.903 -52.352 25.352 1.00 66.02 C
ATOM 14 N1 U A1416 -12.163 -52.603 24.636 1.00 58.29 N
ATOM 15 C2 U A1416 -13.046 -53.508 25.166 1.00 58.04 C
ATOM 16 O2 U A1416 -12.837 -54.106 26.199 1.00 60.81 O
ATOM 17 N3 U A1416 -14.198 -53.692 24.448 1.00 67.59 N
ATOM 18 C4 U A1416 -14.554 -53.077 23.258 1.00 76.22 C
ATOM 19 O4 U A1416 -15.634 -53.354 22.719 1.00 73.45 O
ATOM 20 C5 U A1416 -13.565 -52.142 22.765 1.00 66.92 C
ATOM 21 C6 U A1416 -12.431 -51.951 23.456 1.00 58.54 C
ATOM 22 P C A1417 -6.536 -52.753 26.903 1.00 39.45 P
ATOM 23 OP1 C A1417 -6.346 -52.976 28.357 1.00 36.24 O
ATOM 24 OP2 C A1417 -5.965 -51.532 26.275 1.00 46.12 O
ATOM 25 O5' C A1417 -5.978 -54.052 26.134 1.00 37.40 O
TER

ATOM 1 O3' A B1414 -12.795 -51.468 19.406 1.00 51.31 O
ATOM 2 P U B1415 -13.025 -50.366 18.274 1.00 65.46 P
ATOM 3 OP1 U B1415 -14.464 -50.081 18.198 1.00 80.68 O
ATOM 4 OP2 U B1415 -12.253 -50.734 17.066 1.00 83.18 O
ATOM 5 O5' U B1415 -12.316 -49.125 18.955 1.00 66.85 O
ATOM 6 C5' U B1415 -11.461 -49.442 20.015 1.00 69.88 C
ATOM 7 C4' U B1415 -10.366 -48.419 20.094 1.00 66.13 C
ATOM 8 O4' U B1415 -10.857 -47.195 19.509 1.00 66.16 O
ATOM 9 C3' U B1415 -9.969 -48.124 21.532 1.00 69.72 C
ATOM 10 O3' U B1415 -8.582 -48.416 21.679 1.00 72.42 O
ATOM 11 C2' U B1415 -10.374 -46.656 21.730 1.00 79.37 C
ATOM 12 O2' U B1415 -9.476 -45.897 22.517 1.00 90.40 O
ATOM 13 C1' U B1415 -10.405 -46.121 20.300 1.00 81.09 C
ATOM 14 N1 U B1415 -11.332 -44.976 20.091 1.00 73.43 N
ATOM 15 C2 U B1415 -12.631 -45.065 20.532 1.00 78.68 C
ATOM 16 O2 U B1415 -13.073 -46.045 21.100 1.00 95.61 O
ATOM 17 N3 U B1415 -13.405 -43.959 20.287 1.00 75.47 N
ATOM 18 C4 U B1415 -13.015 -42.798 19.651 1.00 87.73 C
ATOM 19 O4 U B1415 -13.820 -41.884 19.502 1.00 91.64 O
ATOM 20 C5 U B1415 -11.643 -42.782 19.214 1.00 89.73 C
ATOM 21 C6 U B1415 -10.873 -43.851 19.445 1.00 77.63 C
ATOM 22 P U B1416 -8.078 -49.940 21.684 1.00 43.68 P
ATOM 23 OP1 U B1416 -6.641 -49.905 22.034 1.00 63.89 O
ATOM 24 OP2 U B1416 -8.502 -50.616 20.430 1.00 44.05 O
ATOM 25 O5' U B1416 -8.854 -50.557 22.940 1.00 52.96 O
TER

Atoms:
C4: (-14.554,-53.077,23.258)
N3: (-14.198,-53.692,24.448)
OP1: (-6.641,-49.905,22.034)
OP2: (-8.502,-50.616,20.430)
C2: (-13.046,-53.508,25.166)
C1': (-10.903,-52.352,25.352)
C3': (-8.569,-52.287,25.273)
O5': (-8.854,-50.557,22.940)
O4': (-10.562,-50.985,25.303)
C5': (-8.665,-49.959,24.217)
P: (-8.078,-49.940,21.684)
C4': (-9.119,-50.865,25.345)
C2': (-9.751,-53.072,24.690)
O2': (-9.832,-54.440,25.033)
N1: (-12.163,-52.603,24.636)
O4: (-15.634,-53.354,22.719)
O2: (-12.837,-54.106,26.199)
C6: (-12.431,-51.951,23.456)
C5: (-13.565,-52.142,22.765)
O3': (-8.114,-52.738,26.564)
C4: (-13.015,-42.798,19.651)
N3: (-13.405,-43.959,20.287)
OP1: (-14.464,-50.081,18.198)
OP2: (-12.253,-50.734,17.066)
C2: (-12.631,-45.065,20.532)
C1': (-10.405,-46.121,20.300)
C3': (-9.969,-48.124,21.532)
O5': (-12.316,-49.125,18.955)
O4': (-10.857,-47.195,19.509)
C5': (-11.461,-49.442,20.015)
P: (-13.025,-50.366,18.274)
C4': (-10.366,-48.419,20.094)
C2': (-10.374,-46.656,21.730)
O2': (-9.476,-45.897,22.517)
N1: (-11.332,-44.976,20.091)
O4: (-13.820,-41.884,19.502)
O2: (-13.073,-46.045,21.100)
C6: (-10.873,-43.851,19.445)
C5: (-11.643,-42.782,19.214)
O3': (-8.582,-48.416,21.679)
Image (generated by PyMOL):
PyMOL image
show in jmol