ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQP:02:0519

Extra

PDB:
ATOM 1 O3' A A 1 25.768 149.616 100.754 1.00 46.27 O
ATOM 2 P U A 2 26.147 148.890 99.382 1.00 45.90 P
ATOM 3 OP1 U A 2 26.659 149.937 98.463 1.00 49.73 O
ATOM 4 OP2 U A 2 25.009 148.039 98.962 1.00 47.16 O
ATOM 5 O5' U A 2 27.342 147.910 99.776 1.00 46.46 O
ATOM 6 C5' U A 2 28.684 148.405 99.958 1.00 46.21 C
ATOM 7 C4' U A 2 29.595 147.298 100.443 1.00 46.18 C
ATOM 8 O4' U A 2 29.151 146.842 101.749 1.00 46.72 O
ATOM 9 C3' U A 2 29.619 146.019 99.621 1.00 45.94 C
ATOM 10 O3' U A 2 30.440 146.115 98.469 1.00 45.49 O
ATOM 11 C2' U A 2 30.183 145.028 100.626 1.00 47.04 C
ATOM 12 O2' U A 2 31.576 145.171 100.814 1.00 48.88 O
ATOM 13 C1' U A 2 29.455 145.463 101.898 1.00 47.76 C
ATOM 14 N1 U A 2 28.203 144.706 102.045 1.00 48.46 N
ATOM 15 C2 U A 2 28.298 143.405 102.527 1.00 51.32 C
ATOM 16 O2 U A 2 29.357 142.902 102.886 1.00 51.39 O
ATOM 17 N3 U A 2 27.110 142.716 102.571 1.00 51.55 N
ATOM 18 C4 U A 2 25.869 143.181 102.192 1.00 49.75 C
ATOM 19 O4 U A 2 24.900 142.428 102.256 1.00 50.92 O
ATOM 20 C5 U A 2 25.849 144.542 101.746 1.00 48.40 C
ATOM 21 C6 U A 2 26.986 145.240 101.692 1.00 47.52 C
ATOM 22 P G A 3 29.890 145.601 97.050 1.00 44.54 P
ATOM 23 OP1 G A 3 31.076 145.462 96.170 1.00 44.83 O
ATOM 24 OP2 G A 3 28.757 146.471 96.631 1.00 44.89 O
ATOM 25 O5' G A 3 29.287 144.153 97.331 1.00 44.04 O
TER

ATOM 1 O3' C B 518 16.922 135.031 103.638 1.00 44.80 O
ATOM 2 P G B 519 16.734 136.079 104.842 1.00 48.51 P
ATOM 3 OP1 G B 519 16.588 135.243 106.062 1.00 49.70 O
ATOM 4 OP2 G B 519 15.687 137.072 104.500 1.00 46.15 O
ATOM 5 O5' G B 519 18.120 136.865 104.918 1.00 48.14 O
ATOM 6 C5' G B 519 19.354 136.184 105.242 1.00 47.71 C
ATOM 7 C4' G B 519 20.527 137.127 105.091 1.00 46.11 C
ATOM 8 O4' G B 519 20.608 137.579 103.713 1.00 45.44 O
ATOM 9 C3' G B 519 20.456 138.418 105.893 1.00 44.90 C
ATOM 10 O3' G B 519 20.886 138.212 107.228 1.00 44.42 O
ATOM 11 C2' G B 519 21.399 139.325 105.115 1.00 45.92 C
ATOM 12 O2' G B 519 22.767 139.061 105.366 1.00 47.26 O
ATOM 13 C1' G B 519 21.074 138.919 103.677 1.00 45.23 C
ATOM 14 N9 G B 519 20.029 139.760 103.103 1.00 43.67 N
ATOM 15 C8 G B 519 18.686 139.484 103.021 1.00 43.09 C
ATOM 16 N7 G B 519 17.997 140.456 102.485 1.00 44.55 N
ATOM 17 C5 G B 519 18.944 141.426 102.186 1.00 42.68 C
ATOM 18 C6 G B 519 18.795 142.702 101.586 1.00 43.01 C
ATOM 19 O6 G B 519 17.762 143.245 101.177 1.00 43.42 O
ATOM 20 N1 G B 519 20.016 143.360 101.470 1.00 41.94 N
ATOM 21 C2 G B 519 21.225 142.850 101.861 1.00 42.43 C
ATOM 22 N2 G B 519 22.296 143.629 101.641 1.00 40.23 N
ATOM 23 N3 G B 519 21.378 141.658 102.421 1.00 43.37 N
ATOM 24 C4 G B 519 20.203 141.008 102.554 1.00 43.39 C
ATOM 25 P A B 520 20.647 139.350 108.343 1.00 43.52 P
ATOM 26 OP1 A B 520 20.292 138.620 109.582 1.00 45.99 O
ATOM 27 OP2 A B 520 19.743 140.404 107.840 1.00 44.21 O
ATOM 28 O5' A B 520 22.089 140.000 108.530 1.00 45.35 O
TER

Atoms:
C4: (25.869,143.181,102.192)
N3: (27.110,142.716,102.571)
OP1: (26.659,149.937,98.463)
OP2: (25.009,148.039,98.962)
C2: (28.298,143.405,102.527)
C1': (29.455,145.463,101.898)
C3': (29.619,146.019,99.621)
O5': (27.342,147.910,99.776)
O4': (29.151,146.842,101.749)
C5': (28.684,148.405,99.958)
P: (26.147,148.890,99.382)
C4': (29.595,147.298,100.443)
C2': (30.183,145.028,100.626)
O2': (31.576,145.171,100.814)
N1: (28.203,144.706,102.045)
O4: (24.900,142.428,102.256)
O2: (29.357,142.902,102.886)
C6: (26.986,145.240,101.692)
C5: (25.849,144.542,101.746)
O3': (30.440,146.115,98.469)
OP1: (16.588,135.243,106.062)
OP2: (15.687,137.072,104.500)
C3': (20.456,138.418,105.893)
C1': (21.074,138.919,103.677)
C5': (19.354,136.184,105.242)
O6: (17.762,143.245,101.177)
O4': (20.608,137.579,103.713)
C8: (18.686,139.484,103.021)
C2: (21.225,142.850,101.861)
C6: (18.795,142.702,101.586)
C5: (18.944,141.426,102.186)
C4: (20.203,141.008,102.554)
P: (16.734,136.079,104.842)
C4': (20.527,137.127,105.091)
C2': (21.399,139.325,105.115)
O2': (22.767,139.061,105.366)
N1: (20.016,143.360,101.470)
N2: (22.296,143.629,101.641)
N3: (21.378,141.658,102.421)
N7: (17.997,140.456,102.485)
N9: (20.029,139.760,103.103)
O5': (18.120,136.865,104.918)
O3': (20.886,138.212,107.228)
Image (generated by PyMOL):
PyMOL image
show in jmol