Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:02:0519
Extra
PDB:
ATOM 1 O3' A A 1 26.042 150.959 100.864 1.00 53.90 O
ATOM 2 P U A 2 26.156 150.339 99.392 1.00 54.16 P
ATOM 3 OP1 U A 2 26.524 151.470 98.504 1.00 55.97 O
ATOM 4 OP2 U A 2 24.945 149.543 99.098 1.00 54.04 O
ATOM 5 O5' U A 2 27.390 149.336 99.491 1.00 53.97 O
ATOM 6 C5' U A 2 28.718 149.836 99.724 1.00 51.97 C
ATOM 7 C4' U A 2 29.603 148.762 100.309 1.00 50.42 C
ATOM 8 O4' U A 2 29.094 148.342 101.603 1.00 50.26 O
ATOM 9 C3' U A 2 29.701 147.458 99.543 1.00 50.41 C
ATOM 10 O3' U A 2 30.560 147.542 98.421 1.00 50.41 O
ATOM 11 C2' U A 2 30.254 146.531 100.614 1.00 51.22 C
ATOM 12 O2' U A 2 31.629 146.747 100.884 1.00 52.46 O
ATOM 13 C1' U A 2 29.435 146.977 101.824 1.00 50.64 C
ATOM 14 N1 U A 2 28.201 146.179 101.931 1.00 50.18 N
ATOM 15 C2 U A 2 28.320 144.876 102.401 1.00 50.46 C
ATOM 16 O2 U A 2 29.386 144.386 102.745 1.00 51.90 O
ATOM 17 N3 U A 2 27.147 144.167 102.446 1.00 48.46 N
ATOM 18 C4 U A 2 25.899 144.606 102.077 1.00 48.87 C
ATOM 19 O4 U A 2 24.958 143.816 102.086 1.00 49.41 O
ATOM 20 C5 U A 2 25.852 145.963 101.621 1.00 49.64 C
ATOM 21 C6 U A 2 26.974 146.685 101.567 1.00 49.18 C
ATOM 22 P G A 3 30.030 147.078 96.975 1.00 50.31 P
ATOM 23 OP1 G A 3 31.254 146.889 96.147 1.00 50.93 O
ATOM 24 OP2 G A 3 28.978 148.038 96.534 1.00 52.07 O
ATOM 25 O5' G A 3 29.345 145.656 97.207 1.00 47.29 O
TER
ATOM 1 O3' C B 518 17.036 136.478 103.525 1.00 46.18 O
ATOM 2 P G B 519 16.683 137.496 104.720 1.00 46.44 P
ATOM 3 OP1 G B 519 16.395 136.667 105.917 1.00 46.35 O
ATOM 4 OP2 G B 519 15.682 138.484 104.251 1.00 45.30 O
ATOM 5 O5' G B 519 18.039 138.281 104.990 1.00 46.60 O
ATOM 6 C5' G B 519 19.266 137.579 105.256 1.00 45.13 C
ATOM 7 C4' G B 519 20.440 138.497 105.032 1.00 46.06 C
ATOM 8 O4' G B 519 20.442 138.956 103.653 1.00 46.21 O
ATOM 9 C3' G B 519 20.414 139.784 105.836 1.00 45.36 C
ATOM 10 O3' G B 519 20.893 139.572 107.157 1.00 44.69 O
ATOM 11 C2' G B 519 21.316 140.692 105.014 1.00 46.58 C
ATOM 12 O2' G B 519 22.689 140.423 105.197 1.00 47.91 O
ATOM 13 C1' G B 519 20.923 140.288 103.595 1.00 46.26 C
ATOM 14 N9 G B 519 19.875 141.145 103.052 1.00 48.51 N
ATOM 15 C8 G B 519 18.525 140.890 102.990 1.00 49.05 C
ATOM 16 N7 G B 519 17.845 141.865 102.449 1.00 49.10 N
ATOM 17 C5 G B 519 18.803 142.817 102.136 1.00 49.59 C
ATOM 18 C6 G B 519 18.668 144.091 101.537 1.00 51.01 C
ATOM 19 O6 G B 519 17.638 144.656 101.152 1.00 54.30 O
ATOM 20 N1 G B 519 19.897 144.727 101.403 1.00 50.74 N
ATOM 21 C2 G B 519 21.103 144.203 101.795 1.00 50.38 C
ATOM 22 N2 G B 519 22.188 144.961 101.566 1.00 49.51 N
ATOM 23 N3 G B 519 21.239 143.021 102.365 1.00 49.89 N
ATOM 24 C4 G B 519 20.059 142.387 102.501 1.00 49.14 C
ATOM 25 P A B 520 20.706 140.717 108.272 1.00 43.39 P
ATOM 26 OP1 A B 520 20.422 140.020 109.556 1.00 43.30 O
ATOM 27 OP2 A B 520 19.751 141.724 107.761 1.00 42.99 O
ATOM 28 O5' A B 520 22.147 141.390 108.359 1.00 42.44 O
TER
ATOM 2 P U A 2 26.156 150.339 99.392 1.00 54.16 P
ATOM 3 OP1 U A 2 26.524 151.470 98.504 1.00 55.97 O
ATOM 4 OP2 U A 2 24.945 149.543 99.098 1.00 54.04 O
ATOM 5 O5' U A 2 27.390 149.336 99.491 1.00 53.97 O
ATOM 6 C5' U A 2 28.718 149.836 99.724 1.00 51.97 C
ATOM 7 C4' U A 2 29.603 148.762 100.309 1.00 50.42 C
ATOM 8 O4' U A 2 29.094 148.342 101.603 1.00 50.26 O
ATOM 9 C3' U A 2 29.701 147.458 99.543 1.00 50.41 C
ATOM 10 O3' U A 2 30.560 147.542 98.421 1.00 50.41 O
ATOM 11 C2' U A 2 30.254 146.531 100.614 1.00 51.22 C
ATOM 12 O2' U A 2 31.629 146.747 100.884 1.00 52.46 O
ATOM 13 C1' U A 2 29.435 146.977 101.824 1.00 50.64 C
ATOM 14 N1 U A 2 28.201 146.179 101.931 1.00 50.18 N
ATOM 15 C2 U A 2 28.320 144.876 102.401 1.00 50.46 C
ATOM 16 O2 U A 2 29.386 144.386 102.745 1.00 51.90 O
ATOM 17 N3 U A 2 27.147 144.167 102.446 1.00 48.46 N
ATOM 18 C4 U A 2 25.899 144.606 102.077 1.00 48.87 C
ATOM 19 O4 U A 2 24.958 143.816 102.086 1.00 49.41 O
ATOM 20 C5 U A 2 25.852 145.963 101.621 1.00 49.64 C
ATOM 21 C6 U A 2 26.974 146.685 101.567 1.00 49.18 C
ATOM 22 P G A 3 30.030 147.078 96.975 1.00 50.31 P
ATOM 23 OP1 G A 3 31.254 146.889 96.147 1.00 50.93 O
ATOM 24 OP2 G A 3 28.978 148.038 96.534 1.00 52.07 O
ATOM 25 O5' G A 3 29.345 145.656 97.207 1.00 47.29 O
TER
ATOM 1 O3' C B 518 17.036 136.478 103.525 1.00 46.18 O
ATOM 2 P G B 519 16.683 137.496 104.720 1.00 46.44 P
ATOM 3 OP1 G B 519 16.395 136.667 105.917 1.00 46.35 O
ATOM 4 OP2 G B 519 15.682 138.484 104.251 1.00 45.30 O
ATOM 5 O5' G B 519 18.039 138.281 104.990 1.00 46.60 O
ATOM 6 C5' G B 519 19.266 137.579 105.256 1.00 45.13 C
ATOM 7 C4' G B 519 20.440 138.497 105.032 1.00 46.06 C
ATOM 8 O4' G B 519 20.442 138.956 103.653 1.00 46.21 O
ATOM 9 C3' G B 519 20.414 139.784 105.836 1.00 45.36 C
ATOM 10 O3' G B 519 20.893 139.572 107.157 1.00 44.69 O
ATOM 11 C2' G B 519 21.316 140.692 105.014 1.00 46.58 C
ATOM 12 O2' G B 519 22.689 140.423 105.197 1.00 47.91 O
ATOM 13 C1' G B 519 20.923 140.288 103.595 1.00 46.26 C
ATOM 14 N9 G B 519 19.875 141.145 103.052 1.00 48.51 N
ATOM 15 C8 G B 519 18.525 140.890 102.990 1.00 49.05 C
ATOM 16 N7 G B 519 17.845 141.865 102.449 1.00 49.10 N
ATOM 17 C5 G B 519 18.803 142.817 102.136 1.00 49.59 C
ATOM 18 C6 G B 519 18.668 144.091 101.537 1.00 51.01 C
ATOM 19 O6 G B 519 17.638 144.656 101.152 1.00 54.30 O
ATOM 20 N1 G B 519 19.897 144.727 101.403 1.00 50.74 N
ATOM 21 C2 G B 519 21.103 144.203 101.795 1.00 50.38 C
ATOM 22 N2 G B 519 22.188 144.961 101.566 1.00 49.51 N
ATOM 23 N3 G B 519 21.239 143.021 102.365 1.00 49.89 N
ATOM 24 C4 G B 519 20.059 142.387 102.501 1.00 49.14 C
ATOM 25 P A B 520 20.706 140.717 108.272 1.00 43.39 P
ATOM 26 OP1 A B 520 20.422 140.020 109.556 1.00 43.30 O
ATOM 27 OP2 A B 520 19.751 141.724 107.761 1.00 42.99 O
ATOM 28 O5' A B 520 22.147 141.390 108.359 1.00 42.44 O
TER
Atoms:
C4: (25.899,144.606,102.077)
N3: (27.147,144.167,102.446)
OP1: (26.524,151.470,98.504)
OP2: (24.945,149.543,99.098)
C2: (28.320,144.876,102.401)
C1': (29.435,146.977,101.824)
C3': (29.701,147.458,99.543)
O5': (27.390,149.336,99.491)
O4': (29.094,148.342,101.603)
C5': (28.718,149.836,99.724)
P: (26.156,150.339,99.392)
C4': (29.603,148.762,100.309)
C2': (30.254,146.531,100.614)
O2': (31.629,146.747,100.884)
N1: (28.201,146.179,101.931)
O4: (24.958,143.816,102.086)
O2: (29.386,144.386,102.745)
C6: (26.974,146.685,101.567)
C5: (25.852,145.963,101.621)
O3': (30.560,147.542,98.421)
N3: (27.147,144.167,102.446)
OP1: (26.524,151.470,98.504)
OP2: (24.945,149.543,99.098)
C2: (28.320,144.876,102.401)
C1': (29.435,146.977,101.824)
C3': (29.701,147.458,99.543)
O5': (27.390,149.336,99.491)
O4': (29.094,148.342,101.603)
C5': (28.718,149.836,99.724)
P: (26.156,150.339,99.392)
C4': (29.603,148.762,100.309)
C2': (30.254,146.531,100.614)
O2': (31.629,146.747,100.884)
N1: (28.201,146.179,101.931)
O4: (24.958,143.816,102.086)
O2: (29.386,144.386,102.745)
C6: (26.974,146.685,101.567)
C5: (25.852,145.963,101.621)
O3': (30.560,147.542,98.421)
OP1: (16.395,136.667,105.917)
OP2: (15.682,138.484,104.251)
C3': (20.414,139.784,105.836)
C1': (20.923,140.288,103.595)
C5': (19.266,137.579,105.256)
O6: (17.638,144.656,101.152)
O4': (20.442,138.956,103.653)
C8: (18.525,140.890,102.990)
C2: (21.103,144.203,101.795)
C6: (18.668,144.091,101.537)
C5: (18.803,142.817,102.136)
C4: (20.059,142.387,102.501)
P: (16.683,137.496,104.720)
C4': (20.440,138.497,105.032)
C2': (21.316,140.692,105.014)
O2': (22.689,140.423,105.197)
N1: (19.897,144.727,101.403)
N2: (22.188,144.961,101.566)
N3: (21.239,143.021,102.365)
N7: (17.845,141.865,102.449)
N9: (19.875,141.145,103.052)
O5': (18.039,138.281,104.990)
O3': (20.893,139.572,107.157)
OP2: (15.682,138.484,104.251)
C3': (20.414,139.784,105.836)
C1': (20.923,140.288,103.595)
C5': (19.266,137.579,105.256)
O6: (17.638,144.656,101.152)
O4': (20.442,138.956,103.653)
C8: (18.525,140.890,102.990)
C2: (21.103,144.203,101.795)
C6: (18.668,144.091,101.537)
C5: (18.803,142.817,102.136)
C4: (20.059,142.387,102.501)
P: (16.683,137.496,104.720)
C4': (20.440,138.497,105.032)
C2': (21.316,140.692,105.014)
O2': (22.689,140.423,105.197)
N1: (19.897,144.727,101.403)
N2: (22.188,144.961,101.566)
N3: (21.239,143.021,102.365)
N7: (17.845,141.865,102.449)
N9: (19.875,141.145,103.052)
O5': (18.039,138.281,104.990)
O3': (20.893,139.572,107.157)
Image (generated by PyMOL):