ClaRNA

Doublet info:

Details

Nucleotide types: UU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3FO6:A34:A33

Extra

PDB:
ATOM 1 O3' U A 33 3.024 16.630 -1.652 1.00 44.31 O
ATOM 2 P U A 34 4.314 17.408 -1.077 1.00 43.47 P
ATOM 3 OP1 U A 34 3.995 18.859 -1.163 1.00 43.41 O
ATOM 4 OP2 U A 34 5.523 16.880 -1.758 1.00 44.40 O
ATOM 5 O5' U A 34 4.401 17.008 0.467 1.00 42.83 O
ATOM 6 C5' U A 34 3.226 16.848 1.251 1.00 39.80 C
ATOM 7 C4' U A 34 3.510 17.106 2.716 1.00 39.05 C
ATOM 8 O4' U A 34 3.385 15.848 3.439 1.00 37.62 O
ATOM 9 C3' U A 34 4.914 17.612 3.050 1.00 39.02 C
ATOM 10 O3' U A 34 4.887 18.328 4.283 1.00 40.97 O
ATOM 11 C2' U A 34 5.706 16.318 3.224 1.00 38.85 C
ATOM 12 O2' U A 34 6.789 16.447 4.127 1.00 37.92 O
ATOM 13 C1' U A 34 4.660 15.423 3.877 1.00 37.52 C
ATOM 14 N1 U A 34 4.810 13.977 3.661 1.00 36.90 N
ATOM 15 C2 U A 34 4.552 13.163 4.741 1.00 35.21 C
ATOM 16 O2 U A 34 4.197 13.599 5.821 1.00 34.88 O
ATOM 17 N3 U A 34 4.726 11.822 4.516 1.00 35.04 N
ATOM 18 C4 U A 34 5.131 11.223 3.346 1.00 35.18 C
ATOM 19 O4 U A 34 5.310 10.002 3.326 1.00 33.68 O
ATOM 20 C5 U A 34 5.372 12.132 2.263 1.00 36.48 C
ATOM 21 C6 U A 34 5.204 13.448 2.453 1.00 37.08 C
ATOM 22 P C A 35 6.010 19.442 4.592 1.00 43.53 P
ATOM 23 OP1 C A 35 5.664 20.673 3.830 1.00 43.80 O
ATOM 24 OP2 C A 35 7.355 18.830 4.420 1.00 43.56 O
ATOM 25 O5' C A 35 5.817 19.751 6.143 1.00 42.16 O
TER

ATOM 1 O3' U B 32 7.413 12.489 -0.884 1.00 40.26 O
ATOM 2 P U B 33 6.518 11.629 -1.910 1.00 41.64 P
ATOM 3 OP1 U B 33 5.779 10.632 -1.093 1.00 40.73 O
ATOM 4 OP2 U B 33 7.378 11.170 -3.029 1.00 42.12 O
ATOM 5 O5' U B 33 5.459 12.677 -2.473 1.00 43.10 O
ATOM 6 C5' U B 33 4.549 13.326 -1.592 1.00 43.61 C
ATOM 7 C4' U B 33 3.801 14.417 -2.317 1.00 44.29 C
ATOM 8 O4' U B 33 2.970 13.826 -3.352 1.00 44.90 O
ATOM 9 C3' U B 33 2.872 15.232 -1.421 1.00 44.74 C
ATOM 10 O3' U B 33 3.024 16.630 -1.652 1.00 44.31 O
ATOM 11 C2' U B 33 1.474 14.758 -1.813 1.00 45.67 C
ATOM 12 O2' U B 33 0.501 15.779 -1.709 1.00 49.09 O
ATOM 13 C1' U B 33 1.671 14.367 -3.275 1.00 45.43 C
ATOM 14 N1 U B 33 0.719 13.350 -3.744 1.00 45.47 N
ATOM 15 C2 U B 33 -0.074 13.668 -4.833 1.00 45.63 C
ATOM 16 O2 U B 33 -0.013 14.743 -5.402 1.00 45.87 O
ATOM 17 N3 U B 33 -0.943 12.681 -5.229 1.00 45.57 N
ATOM 18 C4 U B 33 -1.097 11.436 -4.657 1.00 45.95 C
ATOM 19 O4 U B 33 -1.932 10.657 -5.122 1.00 45.83 O
ATOM 20 C5 U B 33 -0.241 11.183 -3.535 1.00 46.03 C
ATOM 21 C6 U B 33 0.616 12.126 -3.129 1.00 45.55 C
ATOM 22 P U B 34 4.314 17.408 -1.077 1.00 43.47 P
ATOM 23 OP1 U B 34 3.995 18.859 -1.163 1.00 43.41 O
ATOM 24 OP2 U B 34 5.523 16.880 -1.758 1.00 44.40 O
ATOM 25 O5' U B 34 4.401 17.008 0.467 1.00 42.83 O
TER

Atoms:
C4: (5.131,11.223,3.346)
N3: (4.726,11.822,4.516)
OP1: (3.995,18.859,-1.163)
OP2: (5.523,16.880,-1.758)
C2: (4.552,13.163,4.741)
C1': (4.660,15.423,3.877)
C3': (4.914,17.612,3.050)
O5': (4.401,17.008,0.467)
O4': (3.385,15.848,3.439)
C5': (3.226,16.848,1.251)
P: (4.314,17.408,-1.077)
C4': (3.510,17.106,2.716)
C2': (5.706,16.318,3.224)
O2': (6.789,16.447,4.127)
N1: (4.810,13.977,3.661)
O4: (5.310,10.002,3.326)
O2: (4.197,13.599,5.821)
C6: (5.204,13.448,2.453)
C5: (5.372,12.132,2.263)
O3': (4.887,18.328,4.283)
C4: (-1.097,11.436,-4.657)
N3: (-0.943,12.681,-5.229)
OP1: (5.779,10.632,-1.093)
OP2: (7.378,11.170,-3.029)
C2: (-0.074,13.668,-4.833)
C1': (1.671,14.367,-3.275)
C3': (2.872,15.232,-1.421)
O5': (5.459,12.677,-2.473)
O4': (2.970,13.826,-3.352)
C5': (4.549,13.326,-1.592)
P: (6.518,11.629,-1.910)
C4': (3.801,14.417,-2.317)
C2': (1.474,14.758,-1.813)
O2': (0.501,15.779,-1.709)
N1: (0.719,13.350,-3.744)
O4: (-1.932,10.657,-5.122)
O2: (-0.013,14.743,-5.402)
C6: (0.616,12.126,-3.129)
C5: (-0.241,11.183,-3.535)
O3': (3.024,16.630,-1.652)
Image (generated by PyMOL):
PyMOL image
show in jmol