Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:0253:0234
Extra
PDB:
ATOM 1 O3' G A 252 91.519 119.591 3.443 1.00 47.25 O
ATOM 2 P U A 253 90.199 119.334 4.321 1.00 46.58 P
ATOM 3 OP1 U A 253 90.498 119.786 5.702 1.00 46.36 O
ATOM 4 OP2 U A 253 89.747 117.938 4.087 1.00 45.37 O
ATOM 5 O5' U A 253 89.110 120.304 3.686 1.00 46.89 O
ATOM 6 C5' U A 253 88.986 121.674 4.102 1.00 47.05 C
ATOM 7 C4' U A 253 88.568 122.523 2.930 1.00 47.78 C
ATOM 8 O4' U A 253 89.687 122.663 2.016 1.00 48.64 O
ATOM 9 C3' U A 253 87.472 121.904 2.087 1.00 48.52 C
ATOM 10 O3' U A 253 86.184 122.140 2.628 1.00 49.27 O
ATOM 11 C2' U A 253 87.690 122.547 0.724 1.00 48.16 C
ATOM 12 O2' U A 253 87.126 123.839 0.610 1.00 48.13 O
ATOM 13 C1' U A 253 89.220 122.629 0.676 1.00 47.81 C
ATOM 14 N1 U A 253 89.858 121.491 -0.005 1.00 47.33 N
ATOM 15 C2 U A 253 89.617 121.330 -1.361 1.00 47.94 C
ATOM 16 O2 U A 253 88.917 122.093 -2.012 1.00 49.03 O
ATOM 17 N3 U A 253 90.229 120.243 -1.930 1.00 46.81 N
ATOM 18 C4 U A 253 91.038 119.325 -1.308 1.00 47.40 C
ATOM 19 O4 U A 253 91.498 118.387 -1.961 1.00 47.44 O
ATOM 20 C5 U A 253 91.248 119.562 0.089 1.00 47.80 C
ATOM 21 C6 U A 253 90.667 120.609 0.677 1.00 46.31 C
ATOM 22 P G A 254 85.089 120.969 2.593 1.00 51.32 P
ATOM 23 OP1 G A 254 83.779 121.561 2.990 1.00 49.96 O
ATOM 24 OP2 G A 254 85.641 119.814 3.346 1.00 49.18 O
ATOM 25 O5' G A 254 85.008 120.549 1.057 1.00 52.10 O
TER
ATOM 1 O3' C B 233 92.720 111.881 -9.464 1.00 58.99 O
ATOM 2 P G B 234 94.212 112.466 -9.499 1.00 61.67 P
ATOM 3 OP1 G B 234 94.560 112.836 -10.901 1.00 62.63 O
ATOM 4 OP2 G B 234 95.071 111.498 -8.766 1.00 58.97 O
ATOM 5 O5' G B 234 94.062 113.800 -8.648 1.00 59.66 O
ATOM 6 C5' G B 234 92.924 114.660 -8.848 1.00 60.82 C
ATOM 7 C4' G B 234 92.997 115.840 -7.918 1.00 62.89 C
ATOM 8 O4' G B 234 92.757 115.389 -6.555 1.00 65.10 O
ATOM 9 C3' G B 234 94.350 116.540 -7.906 1.00 62.89 C
ATOM 10 O3' G B 234 94.178 117.939 -7.747 1.00 61.74 O
ATOM 11 C2' G B 234 95.047 115.904 -6.709 1.00 63.36 C
ATOM 12 O2' G B 234 96.055 116.708 -6.134 1.00 63.40 O
ATOM 13 C1' G B 234 93.877 115.694 -5.750 1.00 64.59 C
ATOM 14 N9 G B 234 94.100 114.586 -4.823 1.00 65.28 N
ATOM 15 C8 G B 234 94.613 113.342 -5.114 1.00 65.08 C
ATOM 16 N7 G B 234 94.780 112.597 -4.056 1.00 65.85 N
ATOM 17 C5 G B 234 94.336 113.390 -3.006 1.00 66.91 C
ATOM 18 C6 G B 234 94.300 113.133 -1.609 1.00 67.15 C
ATOM 19 O6 G B 234 94.695 112.136 -0.999 1.00 67.35 O
ATOM 20 N1 G B 234 93.745 114.200 -0.908 1.00 67.27 N
ATOM 21 C2 G B 234 93.297 115.369 -1.472 1.00 67.31 C
ATOM 22 N2 G B 234 92.768 116.270 -0.631 1.00 68.04 N
ATOM 23 N3 G B 234 93.355 115.633 -2.766 1.00 66.78 N
ATOM 24 C4 G B 234 93.882 114.607 -3.468 1.00 66.13 C
ATOM 25 P A B 235 94.784 118.936 -8.852 1.00 59.51 P
ATOM 26 OP1 A B 235 94.489 118.372 -10.190 1.00 61.07 O
ATOM 27 OP2 A B 235 96.190 119.225 -8.473 1.00 59.33 O
ATOM 28 O5' A B 235 93.932 120.265 -8.673 1.00 58.09 O
TER
ATOM 2 P U A 253 90.199 119.334 4.321 1.00 46.58 P
ATOM 3 OP1 U A 253 90.498 119.786 5.702 1.00 46.36 O
ATOM 4 OP2 U A 253 89.747 117.938 4.087 1.00 45.37 O
ATOM 5 O5' U A 253 89.110 120.304 3.686 1.00 46.89 O
ATOM 6 C5' U A 253 88.986 121.674 4.102 1.00 47.05 C
ATOM 7 C4' U A 253 88.568 122.523 2.930 1.00 47.78 C
ATOM 8 O4' U A 253 89.687 122.663 2.016 1.00 48.64 O
ATOM 9 C3' U A 253 87.472 121.904 2.087 1.00 48.52 C
ATOM 10 O3' U A 253 86.184 122.140 2.628 1.00 49.27 O
ATOM 11 C2' U A 253 87.690 122.547 0.724 1.00 48.16 C
ATOM 12 O2' U A 253 87.126 123.839 0.610 1.00 48.13 O
ATOM 13 C1' U A 253 89.220 122.629 0.676 1.00 47.81 C
ATOM 14 N1 U A 253 89.858 121.491 -0.005 1.00 47.33 N
ATOM 15 C2 U A 253 89.617 121.330 -1.361 1.00 47.94 C
ATOM 16 O2 U A 253 88.917 122.093 -2.012 1.00 49.03 O
ATOM 17 N3 U A 253 90.229 120.243 -1.930 1.00 46.81 N
ATOM 18 C4 U A 253 91.038 119.325 -1.308 1.00 47.40 C
ATOM 19 O4 U A 253 91.498 118.387 -1.961 1.00 47.44 O
ATOM 20 C5 U A 253 91.248 119.562 0.089 1.00 47.80 C
ATOM 21 C6 U A 253 90.667 120.609 0.677 1.00 46.31 C
ATOM 22 P G A 254 85.089 120.969 2.593 1.00 51.32 P
ATOM 23 OP1 G A 254 83.779 121.561 2.990 1.00 49.96 O
ATOM 24 OP2 G A 254 85.641 119.814 3.346 1.00 49.18 O
ATOM 25 O5' G A 254 85.008 120.549 1.057 1.00 52.10 O
TER
ATOM 1 O3' C B 233 92.720 111.881 -9.464 1.00 58.99 O
ATOM 2 P G B 234 94.212 112.466 -9.499 1.00 61.67 P
ATOM 3 OP1 G B 234 94.560 112.836 -10.901 1.00 62.63 O
ATOM 4 OP2 G B 234 95.071 111.498 -8.766 1.00 58.97 O
ATOM 5 O5' G B 234 94.062 113.800 -8.648 1.00 59.66 O
ATOM 6 C5' G B 234 92.924 114.660 -8.848 1.00 60.82 C
ATOM 7 C4' G B 234 92.997 115.840 -7.918 1.00 62.89 C
ATOM 8 O4' G B 234 92.757 115.389 -6.555 1.00 65.10 O
ATOM 9 C3' G B 234 94.350 116.540 -7.906 1.00 62.89 C
ATOM 10 O3' G B 234 94.178 117.939 -7.747 1.00 61.74 O
ATOM 11 C2' G B 234 95.047 115.904 -6.709 1.00 63.36 C
ATOM 12 O2' G B 234 96.055 116.708 -6.134 1.00 63.40 O
ATOM 13 C1' G B 234 93.877 115.694 -5.750 1.00 64.59 C
ATOM 14 N9 G B 234 94.100 114.586 -4.823 1.00 65.28 N
ATOM 15 C8 G B 234 94.613 113.342 -5.114 1.00 65.08 C
ATOM 16 N7 G B 234 94.780 112.597 -4.056 1.00 65.85 N
ATOM 17 C5 G B 234 94.336 113.390 -3.006 1.00 66.91 C
ATOM 18 C6 G B 234 94.300 113.133 -1.609 1.00 67.15 C
ATOM 19 O6 G B 234 94.695 112.136 -0.999 1.00 67.35 O
ATOM 20 N1 G B 234 93.745 114.200 -0.908 1.00 67.27 N
ATOM 21 C2 G B 234 93.297 115.369 -1.472 1.00 67.31 C
ATOM 22 N2 G B 234 92.768 116.270 -0.631 1.00 68.04 N
ATOM 23 N3 G B 234 93.355 115.633 -2.766 1.00 66.78 N
ATOM 24 C4 G B 234 93.882 114.607 -3.468 1.00 66.13 C
ATOM 25 P A B 235 94.784 118.936 -8.852 1.00 59.51 P
ATOM 26 OP1 A B 235 94.489 118.372 -10.190 1.00 61.07 O
ATOM 27 OP2 A B 235 96.190 119.225 -8.473 1.00 59.33 O
ATOM 28 O5' A B 235 93.932 120.265 -8.673 1.00 58.09 O
TER
Atoms:
C4: (91.038,119.325,-1.308)
N3: (90.229,120.243,-1.930)
OP1: (90.498,119.786,5.702)
OP2: (89.747,117.938,4.087)
C2: (89.617,121.330,-1.361)
C1': (89.220,122.629,0.676)
C3': (87.472,121.904,2.087)
O5': (89.110,120.304,3.686)
O4': (89.687,122.663,2.016)
C5': (88.986,121.674,4.102)
P: (90.199,119.334,4.321)
C4': (88.568,122.523,2.930)
C2': (87.690,122.547,0.724)
O2': (87.126,123.839,0.610)
N1: (89.858,121.491,-0.005)
O4: (91.498,118.387,-1.961)
O2: (88.917,122.093,-2.012)
C6: (90.667,120.609,0.677)
C5: (91.248,119.562,0.089)
O3': (86.184,122.140,2.628)
N3: (90.229,120.243,-1.930)
OP1: (90.498,119.786,5.702)
OP2: (89.747,117.938,4.087)
C2: (89.617,121.330,-1.361)
C1': (89.220,122.629,0.676)
C3': (87.472,121.904,2.087)
O5': (89.110,120.304,3.686)
O4': (89.687,122.663,2.016)
C5': (88.986,121.674,4.102)
P: (90.199,119.334,4.321)
C4': (88.568,122.523,2.930)
C2': (87.690,122.547,0.724)
O2': (87.126,123.839,0.610)
N1: (89.858,121.491,-0.005)
O4: (91.498,118.387,-1.961)
O2: (88.917,122.093,-2.012)
C6: (90.667,120.609,0.677)
C5: (91.248,119.562,0.089)
O3': (86.184,122.140,2.628)
OP1: (94.560,112.836,-10.901)
OP2: (95.071,111.498,-8.766)
C3': (94.350,116.540,-7.906)
C1': (93.877,115.694,-5.750)
C5': (92.924,114.660,-8.848)
O6: (94.695,112.136,-0.999)
O4': (92.757,115.389,-6.555)
C8: (94.613,113.342,-5.114)
C2: (93.297,115.369,-1.472)
C6: (94.300,113.133,-1.609)
C5: (94.336,113.390,-3.006)
C4: (93.882,114.607,-3.468)
P: (94.212,112.466,-9.499)
C4': (92.997,115.840,-7.918)
C2': (95.047,115.904,-6.709)
O2': (96.055,116.708,-6.134)
N1: (93.745,114.200,-0.908)
N2: (92.768,116.270,-0.631)
N3: (93.355,115.633,-2.766)
N7: (94.780,112.597,-4.056)
N9: (94.100,114.586,-4.823)
O5': (94.062,113.800,-8.648)
O3': (94.178,117.939,-7.747)
OP2: (95.071,111.498,-8.766)
C3': (94.350,116.540,-7.906)
C1': (93.877,115.694,-5.750)
C5': (92.924,114.660,-8.848)
O6: (94.695,112.136,-0.999)
O4': (92.757,115.389,-6.555)
C8: (94.613,113.342,-5.114)
C2: (93.297,115.369,-1.472)
C6: (94.300,113.133,-1.609)
C5: (94.336,113.390,-3.006)
C4: (93.882,114.607,-3.468)
P: (94.212,112.466,-9.499)
C4': (92.997,115.840,-7.918)
C2': (95.047,115.904,-6.709)
O2': (96.055,116.708,-6.134)
N1: (93.745,114.200,-0.908)
N2: (92.768,116.270,-0.631)
N3: (93.355,115.633,-2.766)
N7: (94.780,112.597,-4.056)
N9: (94.100,114.586,-4.823)
O5': (94.062,113.800,-8.648)
O3': (94.178,117.939,-7.747)
Image (generated by PyMOL):