Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0253:0234
Extra
PDB:
ATOM 1 O3' G A 252 91.541 119.773 3.379 1.00 52.84 O
ATOM 2 P U A 253 90.213 119.487 4.231 1.00 52.80 P
ATOM 3 OP1 U A 253 90.479 119.926 5.621 1.00 52.92 O
ATOM 4 OP2 U A 253 89.779 118.093 3.979 1.00 53.66 O
ATOM 5 O5' U A 253 89.135 120.454 3.576 1.00 53.27 O
ATOM 6 C5' U A 253 88.982 121.818 4.017 1.00 53.01 C
ATOM 7 C4' U A 253 88.521 122.675 2.869 1.00 52.04 C
ATOM 8 O4' U A 253 89.621 122.852 1.940 1.00 52.09 O
ATOM 9 C3' U A 253 87.420 122.046 2.039 1.00 51.84 C
ATOM 10 O3' U A 253 86.136 122.265 2.601 1.00 53.52 O
ATOM 11 C2' U A 253 87.609 122.706 0.683 1.00 51.22 C
ATOM 12 O2' U A 253 87.042 123.999 0.633 1.00 49.82 O
ATOM 13 C1' U A 253 89.138 122.797 0.608 1.00 51.35 C
ATOM 14 N1 U A 253 89.791 121.658 -0.063 1.00 50.85 N
ATOM 15 C2 U A 253 89.623 121.516 -1.436 1.00 50.47 C
ATOM 16 O2 U A 253 88.973 122.293 -2.117 1.00 49.53 O
ATOM 17 N3 U A 253 90.251 120.427 -1.981 1.00 50.80 N
ATOM 18 C4 U A 253 91.016 119.488 -1.323 1.00 51.87 C
ATOM 19 O4 U A 253 91.489 118.542 -1.956 1.00 52.54 O
ATOM 20 C5 U A 253 91.152 119.710 0.084 1.00 51.07 C
ATOM 21 C6 U A 253 90.551 120.756 0.651 1.00 49.72 C
ATOM 22 P G A 254 85.049 121.081 2.573 1.00 55.86 P
ATOM 23 OP1 G A 254 83.736 121.669 2.950 1.00 54.15 O
ATOM 24 OP2 G A 254 85.589 119.931 3.341 1.00 53.97 O
ATOM 25 O5' G A 254 84.976 120.657 1.038 1.00 55.79 O
TER
ATOM 1 O3' C B 233 92.698 112.039 -9.578 1.00 66.21 O
ATOM 2 P G B 234 94.194 112.618 -9.593 1.00 69.47 P
ATOM 3 OP1 G B 234 94.531 113.001 -10.992 1.00 69.93 O
ATOM 4 OP2 G B 234 95.059 111.642 -8.868 1.00 68.00 O
ATOM 5 O5' G B 234 94.064 113.939 -8.719 1.00 67.08 O
ATOM 6 C5' G B 234 92.936 114.811 -8.898 1.00 66.86 C
ATOM 7 C4' G B 234 93.032 115.982 -7.964 1.00 67.10 C
ATOM 8 O4' G B 234 92.784 115.530 -6.606 1.00 67.46 O
ATOM 9 C3' G B 234 94.392 116.665 -7.950 1.00 66.72 C
ATOM 10 O3' G B 234 94.228 118.064 -7.786 1.00 66.23 O
ATOM 11 C2' G B 234 95.075 116.028 -6.747 1.00 66.48 C
ATOM 12 O2' G B 234 96.082 116.844 -6.181 1.00 65.85 O
ATOM 13 C1' G B 234 93.896 115.832 -5.794 1.00 67.40 C
ATOM 14 N9 G B 234 94.089 114.728 -4.858 1.00 68.80 N
ATOM 15 C8 G B 234 94.570 113.471 -5.147 1.00 69.31 C
ATOM 16 N7 G B 234 94.701 112.716 -4.090 1.00 70.15 N
ATOM 17 C5 G B 234 94.267 113.517 -3.040 1.00 71.48 C
ATOM 18 C6 G B 234 94.196 113.248 -1.643 1.00 72.20 C
ATOM 19 O6 G B 234 94.531 112.223 -1.035 1.00 72.95 O
ATOM 20 N1 G B 234 93.677 114.331 -0.938 1.00 71.92 N
ATOM 21 C2 G B 234 93.280 115.520 -1.497 1.00 71.50 C
ATOM 22 N2 G B 234 92.788 116.433 -0.644 1.00 71.14 N
ATOM 23 N3 G B 234 93.358 115.792 -2.794 1.00 71.14 N
ATOM 24 C4 G B 234 93.859 114.753 -3.501 1.00 70.36 C
ATOM 25 P A B 235 94.725 119.056 -8.947 1.00 65.33 P
ATOM 26 OP1 A B 235 94.225 118.524 -10.242 1.00 65.43 O
ATOM 27 OP2 A B 235 96.187 119.272 -8.757 1.00 63.53 O
ATOM 28 O5' A B 235 93.930 120.402 -8.651 1.00 64.19 O
TER
ATOM 2 P U A 253 90.213 119.487 4.231 1.00 52.80 P
ATOM 3 OP1 U A 253 90.479 119.926 5.621 1.00 52.92 O
ATOM 4 OP2 U A 253 89.779 118.093 3.979 1.00 53.66 O
ATOM 5 O5' U A 253 89.135 120.454 3.576 1.00 53.27 O
ATOM 6 C5' U A 253 88.982 121.818 4.017 1.00 53.01 C
ATOM 7 C4' U A 253 88.521 122.675 2.869 1.00 52.04 C
ATOM 8 O4' U A 253 89.621 122.852 1.940 1.00 52.09 O
ATOM 9 C3' U A 253 87.420 122.046 2.039 1.00 51.84 C
ATOM 10 O3' U A 253 86.136 122.265 2.601 1.00 53.52 O
ATOM 11 C2' U A 253 87.609 122.706 0.683 1.00 51.22 C
ATOM 12 O2' U A 253 87.042 123.999 0.633 1.00 49.82 O
ATOM 13 C1' U A 253 89.138 122.797 0.608 1.00 51.35 C
ATOM 14 N1 U A 253 89.791 121.658 -0.063 1.00 50.85 N
ATOM 15 C2 U A 253 89.623 121.516 -1.436 1.00 50.47 C
ATOM 16 O2 U A 253 88.973 122.293 -2.117 1.00 49.53 O
ATOM 17 N3 U A 253 90.251 120.427 -1.981 1.00 50.80 N
ATOM 18 C4 U A 253 91.016 119.488 -1.323 1.00 51.87 C
ATOM 19 O4 U A 253 91.489 118.542 -1.956 1.00 52.54 O
ATOM 20 C5 U A 253 91.152 119.710 0.084 1.00 51.07 C
ATOM 21 C6 U A 253 90.551 120.756 0.651 1.00 49.72 C
ATOM 22 P G A 254 85.049 121.081 2.573 1.00 55.86 P
ATOM 23 OP1 G A 254 83.736 121.669 2.950 1.00 54.15 O
ATOM 24 OP2 G A 254 85.589 119.931 3.341 1.00 53.97 O
ATOM 25 O5' G A 254 84.976 120.657 1.038 1.00 55.79 O
TER
ATOM 1 O3' C B 233 92.698 112.039 -9.578 1.00 66.21 O
ATOM 2 P G B 234 94.194 112.618 -9.593 1.00 69.47 P
ATOM 3 OP1 G B 234 94.531 113.001 -10.992 1.00 69.93 O
ATOM 4 OP2 G B 234 95.059 111.642 -8.868 1.00 68.00 O
ATOM 5 O5' G B 234 94.064 113.939 -8.719 1.00 67.08 O
ATOM 6 C5' G B 234 92.936 114.811 -8.898 1.00 66.86 C
ATOM 7 C4' G B 234 93.032 115.982 -7.964 1.00 67.10 C
ATOM 8 O4' G B 234 92.784 115.530 -6.606 1.00 67.46 O
ATOM 9 C3' G B 234 94.392 116.665 -7.950 1.00 66.72 C
ATOM 10 O3' G B 234 94.228 118.064 -7.786 1.00 66.23 O
ATOM 11 C2' G B 234 95.075 116.028 -6.747 1.00 66.48 C
ATOM 12 O2' G B 234 96.082 116.844 -6.181 1.00 65.85 O
ATOM 13 C1' G B 234 93.896 115.832 -5.794 1.00 67.40 C
ATOM 14 N9 G B 234 94.089 114.728 -4.858 1.00 68.80 N
ATOM 15 C8 G B 234 94.570 113.471 -5.147 1.00 69.31 C
ATOM 16 N7 G B 234 94.701 112.716 -4.090 1.00 70.15 N
ATOM 17 C5 G B 234 94.267 113.517 -3.040 1.00 71.48 C
ATOM 18 C6 G B 234 94.196 113.248 -1.643 1.00 72.20 C
ATOM 19 O6 G B 234 94.531 112.223 -1.035 1.00 72.95 O
ATOM 20 N1 G B 234 93.677 114.331 -0.938 1.00 71.92 N
ATOM 21 C2 G B 234 93.280 115.520 -1.497 1.00 71.50 C
ATOM 22 N2 G B 234 92.788 116.433 -0.644 1.00 71.14 N
ATOM 23 N3 G B 234 93.358 115.792 -2.794 1.00 71.14 N
ATOM 24 C4 G B 234 93.859 114.753 -3.501 1.00 70.36 C
ATOM 25 P A B 235 94.725 119.056 -8.947 1.00 65.33 P
ATOM 26 OP1 A B 235 94.225 118.524 -10.242 1.00 65.43 O
ATOM 27 OP2 A B 235 96.187 119.272 -8.757 1.00 63.53 O
ATOM 28 O5' A B 235 93.930 120.402 -8.651 1.00 64.19 O
TER
Atoms:
C4: (91.016,119.488,-1.323)
N3: (90.251,120.427,-1.981)
OP1: (90.479,119.926,5.621)
OP2: (89.779,118.093,3.979)
C2: (89.623,121.516,-1.436)
C1': (89.138,122.797,0.608)
C3': (87.420,122.046,2.039)
O5': (89.135,120.454,3.576)
O4': (89.621,122.852,1.940)
C5': (88.982,121.818,4.017)
P: (90.213,119.487,4.231)
C4': (88.521,122.675,2.869)
C2': (87.609,122.706,0.683)
O2': (87.042,123.999,0.633)
N1: (89.791,121.658,-0.063)
O4: (91.489,118.542,-1.956)
O2: (88.973,122.293,-2.117)
C6: (90.551,120.756,0.651)
C5: (91.152,119.710,0.084)
O3': (86.136,122.265,2.601)
N3: (90.251,120.427,-1.981)
OP1: (90.479,119.926,5.621)
OP2: (89.779,118.093,3.979)
C2: (89.623,121.516,-1.436)
C1': (89.138,122.797,0.608)
C3': (87.420,122.046,2.039)
O5': (89.135,120.454,3.576)
O4': (89.621,122.852,1.940)
C5': (88.982,121.818,4.017)
P: (90.213,119.487,4.231)
C4': (88.521,122.675,2.869)
C2': (87.609,122.706,0.683)
O2': (87.042,123.999,0.633)
N1: (89.791,121.658,-0.063)
O4: (91.489,118.542,-1.956)
O2: (88.973,122.293,-2.117)
C6: (90.551,120.756,0.651)
C5: (91.152,119.710,0.084)
O3': (86.136,122.265,2.601)
OP1: (94.531,113.001,-10.992)
OP2: (95.059,111.642,-8.868)
C3': (94.392,116.665,-7.950)
C1': (93.896,115.832,-5.794)
C5': (92.936,114.811,-8.898)
O6: (94.531,112.223,-1.035)
O4': (92.784,115.530,-6.606)
C8: (94.570,113.471,-5.147)
C2: (93.280,115.520,-1.497)
C6: (94.196,113.248,-1.643)
C5: (94.267,113.517,-3.040)
C4: (93.859,114.753,-3.501)
P: (94.194,112.618,-9.593)
C4': (93.032,115.982,-7.964)
C2': (95.075,116.028,-6.747)
O2': (96.082,116.844,-6.181)
N1: (93.677,114.331,-0.938)
N2: (92.788,116.433,-0.644)
N3: (93.358,115.792,-2.794)
N7: (94.701,112.716,-4.090)
N9: (94.089,114.728,-4.858)
O5': (94.064,113.939,-8.719)
O3': (94.228,118.064,-7.786)
OP2: (95.059,111.642,-8.868)
C3': (94.392,116.665,-7.950)
C1': (93.896,115.832,-5.794)
C5': (92.936,114.811,-8.898)
O6: (94.531,112.223,-1.035)
O4': (92.784,115.530,-6.606)
C8: (94.570,113.471,-5.147)
C2: (93.280,115.520,-1.497)
C6: (94.196,113.248,-1.643)
C5: (94.267,113.517,-3.040)
C4: (93.859,114.753,-3.501)
P: (94.194,112.618,-9.593)
C4': (93.032,115.982,-7.964)
C2': (95.075,116.028,-6.747)
O2': (96.082,116.844,-6.181)
N1: (93.677,114.331,-0.938)
N2: (92.788,116.433,-0.644)
N3: (93.358,115.792,-2.794)
N7: (94.701,112.716,-4.090)
N9: (94.089,114.728,-4.858)
O5': (94.064,113.939,-8.719)
O3': (94.228,118.064,-7.786)
Image (generated by PyMOL):