ClaRNA

Doublet info:

Details

Nucleotide types: CC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J03:A98:A97

Extra

PDB:
ATOM 1 O3' C A 97 -31.927 -86.717 62.826 1.00 23.02 O
ATOM 2 P C A 98 -32.174 -85.160 63.067 1.00 89.42 P
ATOM 3 OP1 C A 98 -33.027 -84.703 61.961 1.00 16.22 O
ATOM 4 OP2 C A 98 -30.870 -84.478 63.311 1.00 16.13 O
ATOM 5 O5' C A 98 -33.024 -85.177 64.409 1.00 35.54 O
ATOM 6 C5' C A 98 -34.253 -85.913 64.459 1.00 35.54 C
ATOM 7 C4' C A 98 -34.625 -86.234 65.880 1.00 35.54 C
ATOM 8 O4' C A 98 -33.759 -87.268 66.414 1.00 35.54 O
ATOM 9 C3' C A 98 -34.512 -85.094 66.875 1.00 35.54 C
ATOM 10 O3' C A 98 -35.622 -84.208 66.820 1.00 35.54 O
ATOM 11 C2' C A 98 -34.420 -85.850 68.192 1.00 35.54 C
ATOM 12 O2' C A 98 -35.696 -86.332 68.579 1.00 35.54 O
ATOM 13 C1' C A 98 -33.542 -87.037 67.795 1.00 35.54 C
ATOM 14 N1 C A 98 -32.108 -86.755 68.002 1.00 18.50 N
ATOM 15 C2 C A 98 -31.601 -86.705 69.304 1.00 18.68 C
ATOM 16 O2 C A 98 -32.360 -86.942 70.248 1.00 18.71 O
ATOM 17 N3 C A 98 -30.295 -86.402 69.499 1.00 18.70 N
ATOM 18 C4 C A 98 -29.507 -86.157 68.452 1.00 18.57 C
ATOM 19 N4 C A 98 -28.235 -85.832 68.676 1.00 18.48 N
ATOM 20 C5 C A 98 -29.990 -86.226 67.120 1.00 18.68 C
ATOM 21 C6 C A 98 -31.283 -86.526 66.940 1.00 18.62 C
ATOM 22 P C A 99 -35.386 -82.628 67.030 1.00 49.08 P
ATOM 23 OP1 C A 99 -36.586 -81.988 66.453 1.00 25.54 O
ATOM 24 OP2 C A 99 -34.023 -82.244 66.546 1.00 25.49 O
ATOM 25 O5' C A 99 -35.431 -82.419 68.609 1.00 26.72 O
TER

ATOM 1 O3' U B 96 -25.392 -86.979 60.989 1.00 20.53 O
ATOM 2 P C B 97 -26.581 -85.943 61.291 1.00 63.16 P
ATOM 3 OP1 C B 97 -26.559 -84.930 60.199 1.00 10.48 O
ATOM 4 OP2 C B 97 -26.576 -85.499 62.717 1.00 10.40 O
ATOM 5 O5' C B 97 -27.879 -86.831 61.131 1.00 23.02 O
ATOM 6 C5' C B 97 -29.044 -86.460 61.816 1.00 23.02 C
ATOM 7 C4' C B 97 -29.820 -87.672 62.224 1.00 23.02 C
ATOM 8 O4' C B 97 -28.953 -88.693 62.774 1.00 23.02 O
ATOM 9 C3' C B 97 -30.755 -87.305 63.348 1.00 23.02 C
ATOM 10 O3' C B 97 -31.927 -86.717 62.826 1.00 23.02 O
ATOM 11 C2' C B 97 -30.931 -88.610 64.102 1.00 23.02 C
ATOM 12 O2' C B 97 -31.939 -89.416 63.526 1.00 23.02 O
ATOM 13 C1' C B 97 -29.538 -89.237 63.950 1.00 23.02 C
ATOM 14 N1 C B 97 -28.653 -88.903 65.080 1.00 41.87 N
ATOM 15 C2 C B 97 -28.996 -89.314 66.377 1.00 41.95 C
ATOM 16 O2 C B 97 -30.021 -89.982 66.547 1.00 41.84 O
ATOM 17 N3 C B 97 -28.198 -88.970 67.410 1.00 42.02 N
ATOM 18 C4 C B 97 -27.091 -88.257 67.189 1.00 41.95 C
ATOM 19 N4 C B 97 -26.334 -87.932 68.234 1.00 41.90 N
ATOM 20 C5 C B 97 -26.710 -87.841 65.882 1.00 41.93 C
ATOM 21 C6 C B 97 -27.511 -88.182 64.868 1.00 41.93 C
ATOM 22 P C B 98 -32.174 -85.160 63.067 1.00 89.42 P
ATOM 23 OP1 C B 98 -33.027 -84.703 61.961 1.00 16.22 O
ATOM 24 OP2 C B 98 -30.870 -84.478 63.311 1.00 16.13 O
ATOM 25 O5' C B 98 -33.024 -85.177 64.409 1.00 35.54 O
TER

Atoms:
C2: (-31.601,-86.705,69.304)
OP1: (-33.027,-84.703,61.961)
OP2: (-30.870,-84.478,63.311)
C4: (-29.507,-86.157,68.452)
O5': (-33.024,-85.177,64.409)
C3': (-34.512,-85.094,66.875)
C1': (-33.542,-87.037,67.795)
O4': (-33.759,-87.268,66.414)
C5': (-34.253,-85.913,64.459)
P: (-32.174,-85.160,63.067)
O2: (-32.360,-86.942,70.248)
C4': (-34.625,-86.234,65.880)
C2': (-34.420,-85.850,68.192)
O2': (-35.696,-86.332,68.579)
N1: (-32.108,-86.755,68.002)
N3: (-30.295,-86.402,69.499)
N4: (-28.235,-85.832,68.676)
C6: (-31.283,-86.526,66.940)
C5: (-29.990,-86.226,67.120)
O3': (-35.622,-84.208,66.820)
C2: (-28.996,-89.314,66.377)
OP1: (-26.559,-84.930,60.199)
OP2: (-26.576,-85.499,62.717)
C4: (-27.091,-88.257,67.189)
O5': (-27.879,-86.831,61.131)
C3': (-30.755,-87.305,63.348)
C1': (-29.538,-89.237,63.950)
O4': (-28.953,-88.693,62.774)
C5': (-29.044,-86.460,61.816)
P: (-26.581,-85.943,61.291)
O2: (-30.021,-89.982,66.547)
C4': (-29.820,-87.672,62.224)
C2': (-30.931,-88.610,64.102)
O2': (-31.939,-89.416,63.526)
N1: (-28.653,-88.903,65.080)
N3: (-28.198,-88.970,67.410)
N4: (-26.334,-87.932,68.234)
C6: (-27.511,-88.182,64.868)
C5: (-26.710,-87.841,65.882)
O3': (-31.927,-86.717,62.826)
Image (generated by PyMOL):
PyMOL image
show in jmol