Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQN:0545:0544
Extra
PDB:
ATOM 1 O3' C A 544 -2.275 117.505 93.448 1.00 56.54 O
ATOM 2 P C A 545 -2.991 116.426 94.400 1.00 58.16 P
ATOM 3 OP1 C A 545 -1.901 115.726 95.133 1.00 58.93 O
ATOM 4 OP2 C A 545 -3.962 115.630 93.595 1.00 56.85 O
ATOM 5 O5' C A 545 -3.798 117.323 95.436 1.00 55.85 O
ATOM 6 C5' C A 545 -3.112 118.191 96.350 1.00 54.96 C
ATOM 7 C4' C A 545 -4.111 119.006 97.137 1.00 57.68 C
ATOM 8 O4' C A 545 -4.855 119.866 96.234 1.00 57.35 O
ATOM 9 C3' C A 545 -5.190 118.201 97.838 1.00 57.88 C
ATOM 10 O3' C A 545 -4.742 117.671 99.071 1.00 59.45 O
ATOM 11 C2' C A 545 -6.293 119.227 98.006 1.00 57.25 C
ATOM 12 O2' C A 545 -6.018 120.120 99.060 1.00 58.34 O
ATOM 13 C1' C A 545 -6.206 119.966 96.670 1.00 58.04 C
ATOM 14 N1 C A 545 -7.077 119.373 95.630 1.00 58.58 N
ATOM 15 C2 C A 545 -8.468 119.614 95.673 1.00 57.72 C
ATOM 16 O2 C A 545 -8.937 120.326 96.574 1.00 57.18 O
ATOM 17 N3 C A 545 -9.261 119.063 94.728 1.00 56.87 N
ATOM 18 C4 C A 545 -8.729 118.302 93.769 1.00 57.26 C
ATOM 19 N4 C A 545 -9.553 117.771 92.859 1.00 55.28 N
ATOM 20 C5 C A 545 -7.327 118.047 93.699 1.00 58.23 C
ATOM 21 C6 C A 545 -6.547 118.595 94.639 1.00 57.10 C
ATOM 22 P C A 546 -5.250 116.220 99.537 1.00 62.57 P
ATOM 23 OP1 C A 546 -4.275 115.716 100.542 1.00 62.67 O
ATOM 24 OP2 C A 546 -5.564 115.395 98.341 1.00 62.13 O
ATOM 25 O5' C A 546 -6.621 116.530 100.282 1.00 65.33 O
TER
ATOM 1 O3' U B 543 -2.243 116.987 87.321 1.00 54.64 O
ATOM 2 P C B 544 -2.784 116.013 88.471 1.00 52.85 P
ATOM 3 OP1 C B 544 -1.714 115.023 88.721 1.00 55.46 O
ATOM 4 OP2 C B 544 -4.143 115.543 88.119 1.00 54.47 O
ATOM 5 O5' C B 544 -2.905 116.976 89.731 1.00 53.89 O
ATOM 6 C5' C B 544 -1.746 117.623 90.272 1.00 52.98 C
ATOM 7 C4' C B 544 -2.147 118.648 91.307 1.00 54.19 C
ATOM 8 O4' C B 544 -2.942 119.692 90.686 1.00 54.87 O
ATOM 9 C3' C B 544 -3.026 118.166 92.447 1.00 53.62 C
ATOM 10 O3' C B 544 -2.275 117.505 93.448 1.00 56.54 O
ATOM 11 C2' C B 544 -3.632 119.467 92.947 1.00 53.43 C
ATOM 12 O2' C B 544 -2.737 120.253 93.705 1.00 54.94 O
ATOM 13 C1' C B 544 -3.881 120.191 91.629 1.00 53.49 C
ATOM 14 N1 C B 544 -5.244 119.975 91.112 1.00 52.51 N
ATOM 15 C2 C B 544 -6.265 120.805 91.575 1.00 51.83 C
ATOM 16 O2 C B 544 -5.998 121.655 92.436 1.00 52.24 O
ATOM 17 N3 C B 544 -7.514 120.659 91.076 1.00 51.83 N
ATOM 18 C4 C B 544 -7.761 119.720 90.160 1.00 52.39 C
ATOM 19 N4 C B 544 -9.003 119.625 89.684 1.00 51.87 N
ATOM 20 C5 C B 544 -6.743 118.840 89.689 1.00 51.37 C
ATOM 21 C6 C B 544 -5.512 118.999 90.189 1.00 51.78 C
ATOM 22 P C B 545 -2.991 116.426 94.400 1.00 58.16 P
ATOM 23 OP1 C B 545 -1.901 115.726 95.133 1.00 58.93 O
ATOM 24 OP2 C B 545 -3.962 115.630 93.595 1.00 56.85 O
ATOM 25 O5' C B 545 -3.798 117.323 95.436 1.00 55.85 O
TER
ATOM 2 P C A 545 -2.991 116.426 94.400 1.00 58.16 P
ATOM 3 OP1 C A 545 -1.901 115.726 95.133 1.00 58.93 O
ATOM 4 OP2 C A 545 -3.962 115.630 93.595 1.00 56.85 O
ATOM 5 O5' C A 545 -3.798 117.323 95.436 1.00 55.85 O
ATOM 6 C5' C A 545 -3.112 118.191 96.350 1.00 54.96 C
ATOM 7 C4' C A 545 -4.111 119.006 97.137 1.00 57.68 C
ATOM 8 O4' C A 545 -4.855 119.866 96.234 1.00 57.35 O
ATOM 9 C3' C A 545 -5.190 118.201 97.838 1.00 57.88 C
ATOM 10 O3' C A 545 -4.742 117.671 99.071 1.00 59.45 O
ATOM 11 C2' C A 545 -6.293 119.227 98.006 1.00 57.25 C
ATOM 12 O2' C A 545 -6.018 120.120 99.060 1.00 58.34 O
ATOM 13 C1' C A 545 -6.206 119.966 96.670 1.00 58.04 C
ATOM 14 N1 C A 545 -7.077 119.373 95.630 1.00 58.58 N
ATOM 15 C2 C A 545 -8.468 119.614 95.673 1.00 57.72 C
ATOM 16 O2 C A 545 -8.937 120.326 96.574 1.00 57.18 O
ATOM 17 N3 C A 545 -9.261 119.063 94.728 1.00 56.87 N
ATOM 18 C4 C A 545 -8.729 118.302 93.769 1.00 57.26 C
ATOM 19 N4 C A 545 -9.553 117.771 92.859 1.00 55.28 N
ATOM 20 C5 C A 545 -7.327 118.047 93.699 1.00 58.23 C
ATOM 21 C6 C A 545 -6.547 118.595 94.639 1.00 57.10 C
ATOM 22 P C A 546 -5.250 116.220 99.537 1.00 62.57 P
ATOM 23 OP1 C A 546 -4.275 115.716 100.542 1.00 62.67 O
ATOM 24 OP2 C A 546 -5.564 115.395 98.341 1.00 62.13 O
ATOM 25 O5' C A 546 -6.621 116.530 100.282 1.00 65.33 O
TER
ATOM 1 O3' U B 543 -2.243 116.987 87.321 1.00 54.64 O
ATOM 2 P C B 544 -2.784 116.013 88.471 1.00 52.85 P
ATOM 3 OP1 C B 544 -1.714 115.023 88.721 1.00 55.46 O
ATOM 4 OP2 C B 544 -4.143 115.543 88.119 1.00 54.47 O
ATOM 5 O5' C B 544 -2.905 116.976 89.731 1.00 53.89 O
ATOM 6 C5' C B 544 -1.746 117.623 90.272 1.00 52.98 C
ATOM 7 C4' C B 544 -2.147 118.648 91.307 1.00 54.19 C
ATOM 8 O4' C B 544 -2.942 119.692 90.686 1.00 54.87 O
ATOM 9 C3' C B 544 -3.026 118.166 92.447 1.00 53.62 C
ATOM 10 O3' C B 544 -2.275 117.505 93.448 1.00 56.54 O
ATOM 11 C2' C B 544 -3.632 119.467 92.947 1.00 53.43 C
ATOM 12 O2' C B 544 -2.737 120.253 93.705 1.00 54.94 O
ATOM 13 C1' C B 544 -3.881 120.191 91.629 1.00 53.49 C
ATOM 14 N1 C B 544 -5.244 119.975 91.112 1.00 52.51 N
ATOM 15 C2 C B 544 -6.265 120.805 91.575 1.00 51.83 C
ATOM 16 O2 C B 544 -5.998 121.655 92.436 1.00 52.24 O
ATOM 17 N3 C B 544 -7.514 120.659 91.076 1.00 51.83 N
ATOM 18 C4 C B 544 -7.761 119.720 90.160 1.00 52.39 C
ATOM 19 N4 C B 544 -9.003 119.625 89.684 1.00 51.87 N
ATOM 20 C5 C B 544 -6.743 118.840 89.689 1.00 51.37 C
ATOM 21 C6 C B 544 -5.512 118.999 90.189 1.00 51.78 C
ATOM 22 P C B 545 -2.991 116.426 94.400 1.00 58.16 P
ATOM 23 OP1 C B 545 -1.901 115.726 95.133 1.00 58.93 O
ATOM 24 OP2 C B 545 -3.962 115.630 93.595 1.00 56.85 O
ATOM 25 O5' C B 545 -3.798 117.323 95.436 1.00 55.85 O
TER
Atoms:
C2: (-8.468,119.614,95.673)
OP1: (-1.901,115.726,95.133)
OP2: (-3.962,115.630,93.595)
C4: (-8.729,118.302,93.769)
O5': (-3.798,117.323,95.436)
C3': (-5.190,118.201,97.838)
C1': (-6.206,119.966,96.670)
O4': (-4.855,119.866,96.234)
C5': (-3.112,118.191,96.350)
P: (-2.991,116.426,94.400)
O2: (-8.937,120.326,96.574)
C4': (-4.111,119.006,97.137)
C2': (-6.293,119.227,98.006)
O2': (-6.018,120.120,99.060)
N1: (-7.077,119.373,95.630)
N3: (-9.261,119.063,94.728)
N4: (-9.553,117.771,92.859)
C6: (-6.547,118.595,94.639)
C5: (-7.327,118.047,93.699)
O3': (-4.742,117.671,99.071)
OP1: (-1.901,115.726,95.133)
OP2: (-3.962,115.630,93.595)
C4: (-8.729,118.302,93.769)
O5': (-3.798,117.323,95.436)
C3': (-5.190,118.201,97.838)
C1': (-6.206,119.966,96.670)
O4': (-4.855,119.866,96.234)
C5': (-3.112,118.191,96.350)
P: (-2.991,116.426,94.400)
O2: (-8.937,120.326,96.574)
C4': (-4.111,119.006,97.137)
C2': (-6.293,119.227,98.006)
O2': (-6.018,120.120,99.060)
N1: (-7.077,119.373,95.630)
N3: (-9.261,119.063,94.728)
N4: (-9.553,117.771,92.859)
C6: (-6.547,118.595,94.639)
C5: (-7.327,118.047,93.699)
O3': (-4.742,117.671,99.071)
C2: (-6.265,120.805,91.575)
OP1: (-1.714,115.023,88.721)
OP2: (-4.143,115.543,88.119)
C4: (-7.761,119.720,90.160)
O5': (-2.905,116.976,89.731)
C3': (-3.026,118.166,92.447)
C1': (-3.881,120.191,91.629)
O4': (-2.942,119.692,90.686)
C5': (-1.746,117.623,90.272)
P: (-2.784,116.013,88.471)
O2: (-5.998,121.655,92.436)
C4': (-2.147,118.648,91.307)
C2': (-3.632,119.467,92.947)
O2': (-2.737,120.253,93.705)
N1: (-5.244,119.975,91.112)
N3: (-7.514,120.659,91.076)
N4: (-9.003,119.625,89.684)
C6: (-5.512,118.999,90.189)
C5: (-6.743,118.840,89.689)
O3': (-2.275,117.505,93.448)
OP1: (-1.714,115.023,88.721)
OP2: (-4.143,115.543,88.119)
C4: (-7.761,119.720,90.160)
O5': (-2.905,116.976,89.731)
C3': (-3.026,118.166,92.447)
C1': (-3.881,120.191,91.629)
O4': (-2.942,119.692,90.686)
C5': (-1.746,117.623,90.272)
P: (-2.784,116.013,88.471)
O2: (-5.998,121.655,92.436)
C4': (-2.147,118.648,91.307)
C2': (-3.632,119.467,92.947)
O2': (-2.737,120.253,93.705)
N1: (-5.244,119.975,91.112)
N3: (-7.514,120.659,91.076)
N4: (-9.003,119.625,89.684)
C6: (-5.512,118.999,90.189)
C5: (-6.743,118.840,89.689)
O3': (-2.275,117.505,93.448)
Image (generated by PyMOL):