Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3GER:A34:A33
Extra
PDB:
ATOM 1 O3' U A 33 3.091 15.875 -1.813 1.00 35.28 O
ATOM 2 P U A 34 4.379 16.620 -1.198 1.00 35.33 P
ATOM 3 OP1 U A 34 4.099 18.076 -1.256 1.00 34.88 O
ATOM 4 OP2 U A 34 5.592 16.079 -1.863 1.00 35.03 O
ATOM 5 O5' U A 34 4.419 16.180 0.336 1.00 33.92 O
ATOM 6 C5' U A 34 3.231 16.147 1.125 1.00 33.76 C
ATOM 7 C4' U A 34 3.538 16.447 2.578 1.00 32.15 C
ATOM 8 O4' U A 34 3.423 15.216 3.344 1.00 31.97 O
ATOM 9 C3' U A 34 4.952 16.953 2.856 1.00 32.73 C
ATOM 10 O3' U A 34 4.963 17.727 4.053 1.00 33.64 O
ATOM 11 C2' U A 34 5.738 15.659 3.048 1.00 31.84 C
ATOM 12 O2' U A 34 6.877 15.798 3.875 1.00 31.75 O
ATOM 13 C1' U A 34 4.707 14.794 3.765 1.00 30.92 C
ATOM 14 N1 U A 34 4.844 13.344 3.562 1.00 29.14 N
ATOM 15 C2 U A 34 4.533 12.530 4.632 1.00 28.30 C
ATOM 16 O2 U A 34 4.133 12.966 5.697 1.00 28.80 O
ATOM 17 N3 U A 34 4.706 11.189 4.410 1.00 27.58 N
ATOM 18 C4 U A 34 5.143 10.589 3.249 1.00 27.44 C
ATOM 19 O4 U A 34 5.246 9.362 3.206 1.00 27.28 O
ATOM 20 C5 U A 34 5.435 11.498 2.181 1.00 27.45 C
ATOM 21 C6 U A 34 5.276 12.813 2.369 1.00 28.06 C
ATOM 22 P C A 35 6.113 18.825 4.286 1.00 35.01 P
ATOM 23 OP1 C A 35 5.848 19.990 3.404 1.00 35.44 O
ATOM 24 OP2 C A 35 7.425 18.130 4.208 1.00 35.05 O
ATOM 25 O5' C A 35 5.896 19.289 5.792 1.00 34.48 O
TER
ATOM 1 O3' U B 32 7.419 11.787 -0.906 1.00 30.94 O
ATOM 2 P U B 33 6.563 10.907 -1.950 1.00 31.74 P
ATOM 3 OP1 U B 33 5.849 9.886 -1.146 1.00 31.19 O
ATOM 4 OP2 U B 33 7.439 10.477 -3.067 1.00 32.01 O
ATOM 5 O5' U B 33 5.490 11.930 -2.525 1.00 32.25 O
ATOM 6 C5' U B 33 4.574 12.585 -1.660 1.00 34.09 C
ATOM 7 C4' U B 33 3.799 13.633 -2.420 1.00 34.91 C
ATOM 8 O4' U B 33 2.958 12.982 -3.408 1.00 35.02 O
ATOM 9 C3' U B 33 2.880 14.492 -1.556 1.00 35.12 C
ATOM 10 O3' U B 33 3.091 15.875 -1.813 1.00 35.28 O
ATOM 11 C2' U B 33 1.472 14.055 -1.960 1.00 35.28 C
ATOM 12 O2' U B 33 0.530 15.106 -1.935 1.00 35.52 O
ATOM 13 C1' U B 33 1.683 13.579 -3.395 1.00 35.18 C
ATOM 14 N1 U B 33 0.694 12.573 -3.809 1.00 35.01 N
ATOM 15 C2 U B 33 -0.185 12.913 -4.822 1.00 35.45 C
ATOM 16 O2 U B 33 -0.154 13.991 -5.393 1.00 36.11 O
ATOM 17 N3 U B 33 -1.101 11.943 -5.145 1.00 35.06 N
ATOM 18 C4 U B 33 -1.222 10.694 -4.573 1.00 35.38 C
ATOM 19 O4 U B 33 -2.113 9.935 -4.962 1.00 35.13 O
ATOM 20 C5 U B 33 -0.268 10.412 -3.543 1.00 35.22 C
ATOM 21 C6 U B 33 0.636 11.339 -3.206 1.00 35.25 C
ATOM 22 P U B 34 4.379 16.620 -1.198 1.00 35.33 P
ATOM 23 OP1 U B 34 4.099 18.076 -1.256 1.00 34.88 O
ATOM 24 OP2 U B 34 5.592 16.079 -1.863 1.00 35.03 O
ATOM 25 O5' U B 34 4.419 16.180 0.336 1.00 33.92 O
TER
ATOM 2 P U A 34 4.379 16.620 -1.198 1.00 35.33 P
ATOM 3 OP1 U A 34 4.099 18.076 -1.256 1.00 34.88 O
ATOM 4 OP2 U A 34 5.592 16.079 -1.863 1.00 35.03 O
ATOM 5 O5' U A 34 4.419 16.180 0.336 1.00 33.92 O
ATOM 6 C5' U A 34 3.231 16.147 1.125 1.00 33.76 C
ATOM 7 C4' U A 34 3.538 16.447 2.578 1.00 32.15 C
ATOM 8 O4' U A 34 3.423 15.216 3.344 1.00 31.97 O
ATOM 9 C3' U A 34 4.952 16.953 2.856 1.00 32.73 C
ATOM 10 O3' U A 34 4.963 17.727 4.053 1.00 33.64 O
ATOM 11 C2' U A 34 5.738 15.659 3.048 1.00 31.84 C
ATOM 12 O2' U A 34 6.877 15.798 3.875 1.00 31.75 O
ATOM 13 C1' U A 34 4.707 14.794 3.765 1.00 30.92 C
ATOM 14 N1 U A 34 4.844 13.344 3.562 1.00 29.14 N
ATOM 15 C2 U A 34 4.533 12.530 4.632 1.00 28.30 C
ATOM 16 O2 U A 34 4.133 12.966 5.697 1.00 28.80 O
ATOM 17 N3 U A 34 4.706 11.189 4.410 1.00 27.58 N
ATOM 18 C4 U A 34 5.143 10.589 3.249 1.00 27.44 C
ATOM 19 O4 U A 34 5.246 9.362 3.206 1.00 27.28 O
ATOM 20 C5 U A 34 5.435 11.498 2.181 1.00 27.45 C
ATOM 21 C6 U A 34 5.276 12.813 2.369 1.00 28.06 C
ATOM 22 P C A 35 6.113 18.825 4.286 1.00 35.01 P
ATOM 23 OP1 C A 35 5.848 19.990 3.404 1.00 35.44 O
ATOM 24 OP2 C A 35 7.425 18.130 4.208 1.00 35.05 O
ATOM 25 O5' C A 35 5.896 19.289 5.792 1.00 34.48 O
TER
ATOM 1 O3' U B 32 7.419 11.787 -0.906 1.00 30.94 O
ATOM 2 P U B 33 6.563 10.907 -1.950 1.00 31.74 P
ATOM 3 OP1 U B 33 5.849 9.886 -1.146 1.00 31.19 O
ATOM 4 OP2 U B 33 7.439 10.477 -3.067 1.00 32.01 O
ATOM 5 O5' U B 33 5.490 11.930 -2.525 1.00 32.25 O
ATOM 6 C5' U B 33 4.574 12.585 -1.660 1.00 34.09 C
ATOM 7 C4' U B 33 3.799 13.633 -2.420 1.00 34.91 C
ATOM 8 O4' U B 33 2.958 12.982 -3.408 1.00 35.02 O
ATOM 9 C3' U B 33 2.880 14.492 -1.556 1.00 35.12 C
ATOM 10 O3' U B 33 3.091 15.875 -1.813 1.00 35.28 O
ATOM 11 C2' U B 33 1.472 14.055 -1.960 1.00 35.28 C
ATOM 12 O2' U B 33 0.530 15.106 -1.935 1.00 35.52 O
ATOM 13 C1' U B 33 1.683 13.579 -3.395 1.00 35.18 C
ATOM 14 N1 U B 33 0.694 12.573 -3.809 1.00 35.01 N
ATOM 15 C2 U B 33 -0.185 12.913 -4.822 1.00 35.45 C
ATOM 16 O2 U B 33 -0.154 13.991 -5.393 1.00 36.11 O
ATOM 17 N3 U B 33 -1.101 11.943 -5.145 1.00 35.06 N
ATOM 18 C4 U B 33 -1.222 10.694 -4.573 1.00 35.38 C
ATOM 19 O4 U B 33 -2.113 9.935 -4.962 1.00 35.13 O
ATOM 20 C5 U B 33 -0.268 10.412 -3.543 1.00 35.22 C
ATOM 21 C6 U B 33 0.636 11.339 -3.206 1.00 35.25 C
ATOM 22 P U B 34 4.379 16.620 -1.198 1.00 35.33 P
ATOM 23 OP1 U B 34 4.099 18.076 -1.256 1.00 34.88 O
ATOM 24 OP2 U B 34 5.592 16.079 -1.863 1.00 35.03 O
ATOM 25 O5' U B 34 4.419 16.180 0.336 1.00 33.92 O
TER
Atoms:
C4: (5.143,10.589,3.249)
N3: (4.706,11.189,4.410)
OP1: (4.099,18.076,-1.256)
OP2: (5.592,16.079,-1.863)
C2: (4.533,12.530,4.632)
C1': (4.707,14.794,3.765)
C3': (4.952,16.953,2.856)
O5': (4.419,16.180,0.336)
O4': (3.423,15.216,3.344)
C5': (3.231,16.147,1.125)
P: (4.379,16.620,-1.198)
C4': (3.538,16.447,2.578)
C2': (5.738,15.659,3.048)
O2': (6.877,15.798,3.875)
N1: (4.844,13.344,3.562)
O4: (5.246,9.362,3.206)
O2: (4.133,12.966,5.697)
C6: (5.276,12.813,2.369)
C5: (5.435,11.498,2.181)
O3': (4.963,17.727,4.053)
N3: (4.706,11.189,4.410)
OP1: (4.099,18.076,-1.256)
OP2: (5.592,16.079,-1.863)
C2: (4.533,12.530,4.632)
C1': (4.707,14.794,3.765)
C3': (4.952,16.953,2.856)
O5': (4.419,16.180,0.336)
O4': (3.423,15.216,3.344)
C5': (3.231,16.147,1.125)
P: (4.379,16.620,-1.198)
C4': (3.538,16.447,2.578)
C2': (5.738,15.659,3.048)
O2': (6.877,15.798,3.875)
N1: (4.844,13.344,3.562)
O4: (5.246,9.362,3.206)
O2: (4.133,12.966,5.697)
C6: (5.276,12.813,2.369)
C5: (5.435,11.498,2.181)
O3': (4.963,17.727,4.053)
C4: (-1.222,10.694,-4.573)
N3: (-1.101,11.943,-5.145)
OP1: (5.849,9.886,-1.146)
OP2: (7.439,10.477,-3.067)
C2: (-0.185,12.913,-4.822)
C1': (1.683,13.579,-3.395)
C3': (2.880,14.492,-1.556)
O5': (5.490,11.930,-2.525)
O4': (2.958,12.982,-3.408)
C5': (4.574,12.585,-1.660)
P: (6.563,10.907,-1.950)
C4': (3.799,13.633,-2.420)
C2': (1.472,14.055,-1.960)
O2': (0.530,15.106,-1.935)
N1: (0.694,12.573,-3.809)
O4: (-2.113,9.935,-4.962)
O2: (-0.154,13.991,-5.393)
C6: (0.636,11.339,-3.206)
C5: (-0.268,10.412,-3.543)
O3': (3.091,15.875,-1.813)
N3: (-1.101,11.943,-5.145)
OP1: (5.849,9.886,-1.146)
OP2: (7.439,10.477,-3.067)
C2: (-0.185,12.913,-4.822)
C1': (1.683,13.579,-3.395)
C3': (2.880,14.492,-1.556)
O5': (5.490,11.930,-2.525)
O4': (2.958,12.982,-3.408)
C5': (4.574,12.585,-1.660)
P: (6.563,10.907,-1.950)
C4': (3.799,13.633,-2.420)
C2': (1.472,14.055,-1.960)
O2': (0.530,15.106,-1.935)
N1: (0.694,12.573,-3.809)
O4: (-2.113,9.935,-4.962)
O2: (-0.154,13.991,-5.393)
C6: (0.636,11.339,-3.206)
C5: (-0.268,10.412,-3.543)
O3': (3.091,15.875,-1.813)
Image (generated by PyMOL):