ClaRNA

Doublet info:

Details

Nucleotide types: CC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3KNH:A708:A707

Extra

PDB:
ATOM 1 O3' C A 707 40.234 33.170 -19.973 1.00 66.74 O
ATOM 2 P C A 708 40.057 33.831 -18.518 1.00 67.44 P
ATOM 3 OP1 C A 708 38.610 34.048 -18.275 1.00 59.73 O
ATOM 4 OP2 C A 708 40.996 34.973 -18.417 1.00 65.52 O
ATOM 5 O5' C A 708 40.590 32.711 -17.522 1.00 72.43 O
ATOM 6 C5' C A 708 39.885 31.487 -17.347 1.00 72.36 C
ATOM 7 C4' C A 708 40.585 30.623 -16.324 1.00 67.60 C
ATOM 8 O4' C A 708 41.889 30.227 -16.830 1.00 68.45 O
ATOM 9 C3' C A 708 40.892 31.286 -14.992 1.00 66.60 C
ATOM 10 O3' C A 708 39.791 31.252 -14.104 1.00 70.57 O
ATOM 11 C2' C A 708 42.068 30.474 -14.471 1.00 65.70 C
ATOM 12 O2' C A 708 41.653 29.265 -13.878 1.00 72.54 O
ATOM 13 C1' C A 708 42.820 30.158 -15.761 1.00 68.59 C
ATOM 14 N1 C A 708 43.882 31.143 -16.012 1.00 70.86 N
ATOM 15 C2 C A 708 45.191 30.902 -15.528 1.00 71.15 C
ATOM 16 O2 C A 708 45.436 29.856 -14.900 1.00 69.87 O
ATOM 17 N3 C A 708 46.152 31.828 -15.755 1.00 76.92 N
ATOM 18 C4 C A 708 45.852 32.950 -16.422 1.00 77.32 C
ATOM 19 N4 C A 708 46.832 33.848 -16.624 1.00 75.26 N
ATOM 20 C5 C A 708 44.538 33.211 -16.915 1.00 74.79 C
ATOM 21 C6 C A 708 43.600 32.289 -16.695 1.00 71.73 C
ATOM 22 P U A 709 39.511 32.520 -13.159 1.00 80.34 P
ATOM 23 OP1 U A 709 38.286 32.234 -12.356 1.00 78.79 O
ATOM 24 OP2 U A 709 39.554 33.715 -14.045 1.00 66.25 O
ATOM 25 O5' U A 709 40.775 32.591 -12.181 1.00 81.07 O
TER

ATOM 1 O3' A B 706 43.587 36.356 -24.162 1.00 70.49 O
ATOM 2 P C B 707 43.138 36.414 -22.616 1.00 71.62 P
ATOM 3 OP1 C B 707 41.860 37.169 -22.521 1.00 79.92 O
ATOM 4 OP2 C B 707 44.310 36.870 -21.816 1.00 69.82 O
ATOM 5 O5' C B 707 42.866 34.886 -22.235 1.00 74.43 O
ATOM 6 C5' C B 707 41.711 34.184 -22.714 1.00 76.45 C
ATOM 7 C4' C B 707 41.584 32.856 -22.007 1.00 77.61 C
ATOM 8 O4' C B 707 42.780 32.080 -22.298 1.00 72.68 O
ATOM 9 C3' C B 707 41.546 32.954 -20.486 1.00 74.26 C
ATOM 10 O3' C B 707 40.234 33.170 -19.973 1.00 66.74 O
ATOM 11 C2' C B 707 42.170 31.634 -20.045 1.00 73.35 C
ATOM 12 O2' C B 707 41.262 30.541 -20.048 1.00 65.08 O
ATOM 13 C1' C B 707 43.242 31.438 -21.121 1.00 72.32 C
ATOM 14 N1 C B 707 44.547 32.044 -20.751 1.00 74.63 N
ATOM 15 C2 C B 707 45.316 31.459 -19.721 1.00 80.74 C
ATOM 16 O2 C B 707 44.889 30.443 -19.144 1.00 83.89 O
ATOM 17 N3 C B 707 46.505 32.025 -19.381 1.00 75.72 N
ATOM 18 C4 C B 707 46.930 33.120 -20.017 1.00 74.12 C
ATOM 19 N4 C B 707 48.105 33.637 -19.649 1.00 74.61 N
ATOM 20 C5 C B 707 46.174 33.731 -21.058 1.00 75.87 C
ATOM 21 C6 C B 707 45.005 33.164 -21.392 1.00 73.98 C
ATOM 22 P C B 708 40.057 33.831 -18.518 1.00 67.44 P
ATOM 23 OP1 C B 708 38.610 34.048 -18.275 1.00 59.73 O
ATOM 24 OP2 C B 708 40.996 34.973 -18.417 1.00 65.52 O
ATOM 25 O5' C B 708 40.590 32.711 -17.522 1.00 72.43 O
TER

Atoms:
C2: (45.191,30.902,-15.528)
OP1: (38.610,34.048,-18.275)
OP2: (40.996,34.973,-18.417)
C4: (45.852,32.950,-16.422)
O5': (40.590,32.711,-17.522)
C3': (40.892,31.286,-14.992)
C1': (42.820,30.158,-15.761)
O4': (41.889,30.227,-16.830)
C5': (39.885,31.487,-17.347)
P: (40.057,33.831,-18.518)
O2: (45.436,29.856,-14.900)
C4': (40.585,30.623,-16.324)
C2': (42.068,30.474,-14.471)
O2': (41.653,29.265,-13.878)
N1: (43.882,31.143,-16.012)
N3: (46.152,31.828,-15.755)
N4: (46.832,33.848,-16.624)
C6: (43.600,32.289,-16.695)
C5: (44.538,33.211,-16.915)
O3': (39.791,31.252,-14.104)
C2: (45.316,31.459,-19.721)
OP1: (41.860,37.169,-22.521)
OP2: (44.310,36.870,-21.816)
C4: (46.930,33.120,-20.017)
O5': (42.866,34.886,-22.235)
C3': (41.546,32.954,-20.486)
C1': (43.242,31.438,-21.121)
O4': (42.780,32.080,-22.298)
C5': (41.711,34.184,-22.714)
P: (43.138,36.414,-22.616)
O2: (44.889,30.443,-19.144)
C4': (41.584,32.856,-22.007)
C2': (42.170,31.634,-20.045)
O2': (41.262,30.541,-20.048)
N1: (44.547,32.044,-20.751)
N3: (46.505,32.025,-19.381)
N4: (48.105,33.637,-19.649)
C6: (45.005,33.164,-21.392)
C5: (46.174,33.731,-21.058)
O3': (40.234,33.170,-19.973)
Image (generated by PyMOL):
PyMOL image
show in jmol