Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A499:A498
Extra
PDB:
ATOM 1 O3' C A 498 22.661-108.677 -22.931 1.00 66.40 O
ATOM 2 P C A 499 22.716-107.597 -21.743 1.00 68.58 P
ATOM 3 OP1 C A 499 21.325-107.352 -21.295 1.00 59.23 O
ATOM 4 OP2 C A 499 23.567-106.454 -22.178 1.00 63.08 O
ATOM 5 O5' C A 499 23.484-108.339 -20.563 1.00 53.33 O
ATOM 6 C5' C A 499 22.921-109.484 -19.951 1.00 54.11 C
ATOM 7 C4' C A 499 23.975-110.214 -19.167 1.00 61.07 C
ATOM 8 O4' C A 499 25.012-110.661 -20.073 1.00 54.91 O
ATOM 9 C3' C A 499 24.697-109.394 -18.111 1.00 55.80 C
ATOM 10 O3' C A 499 23.964-109.403 -16.888 1.00 53.14 O
ATOM 11 C2' C A 499 26.027-110.123 -17.988 1.00 52.00 C
ATOM 12 O2' C A 499 25.922-111.249 -17.147 1.00 53.58 O
ATOM 13 C1' C A 499 26.266-110.598 -19.422 1.00 54.01 C
ATOM 14 N1 C A 499 27.145-109.707 -20.202 1.00 55.47 N
ATOM 15 C2 C A 499 28.500-109.642 -19.894 1.00 56.33 C
ATOM 16 O2 C A 499 28.940-110.326 -18.978 1.00 56.36 O
ATOM 17 N3 C A 499 29.293-108.831 -20.603 1.00 60.13 N
ATOM 18 C4 C A 499 28.785-108.102 -21.593 1.00 62.07 C
ATOM 19 N4 C A 499 29.603-107.312 -22.267 1.00 71.28 N
ATOM 20 C5 C A 499 27.414-108.151 -21.934 1.00 58.92 C
ATOM 21 C6 C A 499 26.635-108.955 -21.221 1.00 56.72 C
ATOM 22 P C A 500 24.225-108.262 -15.789 1.00 52.73 P
ATOM 23 OP1 C A 500 23.200-108.437 -14.723 1.00 49.82 O
ATOM 24 OP2 C A 500 24.346-106.956 -16.489 1.00 47.37 O
ATOM 25 O5' C A 500 25.654-108.631 -15.187 1.00 58.30 O
TER
ATOM 1 O3' A B 497 24.344-105.494 -27.932 1.00 61.70 O
ATOM 2 P C B 498 23.670-105.385 -26.466 1.00 54.06 P
ATOM 3 OP1 C B 498 22.223-105.102 -26.621 1.00 54.21 O
ATOM 4 OP2 C B 498 24.491-104.456 -25.661 1.00 56.35 O
ATOM 5 O5' C B 498 23.868-106.832 -25.813 1.00 55.54 O
ATOM 6 C5' C B 498 22.946-107.897 -26.034 1.00 55.15 C
ATOM 7 C4' C B 498 23.348-109.112 -25.223 1.00 61.93 C
ATOM 8 O4' C B 498 24.504-109.771 -25.809 1.00 63.60 O
ATOM 9 C3' C B 498 23.774-108.825 -23.793 1.00 62.09 C
ATOM 10 O3' C B 498 22.661-108.677 -22.931 1.00 66.40 O
ATOM 11 C2' C B 498 24.668-110.015 -23.442 1.00 54.55 C
ATOM 12 O2' C B 498 24.009-111.183 -22.993 1.00 41.62 O
ATOM 13 C1' C B 498 25.334-110.300 -24.783 1.00 56.85 C
ATOM 14 N1 C B 498 26.672-109.677 -24.882 1.00 59.33 N
ATOM 15 C2 C B 498 27.793-110.426 -24.524 1.00 58.84 C
ATOM 16 O2 C B 498 27.635-111.575 -24.107 1.00 63.59 O
ATOM 17 N3 C B 498 29.018-109.879 -24.641 1.00 58.21 N
ATOM 18 C4 C B 498 29.150-108.633 -25.095 1.00 62.06 C
ATOM 19 N4 C B 498 30.386-108.140 -25.239 1.00 66.67 N
ATOM 20 C5 C B 498 28.026-107.836 -25.438 1.00 63.35 C
ATOM 21 C6 C B 498 26.817-108.392 -25.320 1.00 60.61 C
ATOM 22 P C B 499 22.716-107.597 -21.743 1.00 68.58 P
ATOM 23 OP1 C B 499 21.325-107.352 -21.295 1.00 59.23 O
ATOM 24 OP2 C B 499 23.567-106.454 -22.178 1.00 63.08 O
ATOM 25 O5' C B 499 23.484-108.339 -20.563 1.00 53.33 O
TER
ATOM 2 P C A 499 22.716-107.597 -21.743 1.00 68.58 P
ATOM 3 OP1 C A 499 21.325-107.352 -21.295 1.00 59.23 O
ATOM 4 OP2 C A 499 23.567-106.454 -22.178 1.00 63.08 O
ATOM 5 O5' C A 499 23.484-108.339 -20.563 1.00 53.33 O
ATOM 6 C5' C A 499 22.921-109.484 -19.951 1.00 54.11 C
ATOM 7 C4' C A 499 23.975-110.214 -19.167 1.00 61.07 C
ATOM 8 O4' C A 499 25.012-110.661 -20.073 1.00 54.91 O
ATOM 9 C3' C A 499 24.697-109.394 -18.111 1.00 55.80 C
ATOM 10 O3' C A 499 23.964-109.403 -16.888 1.00 53.14 O
ATOM 11 C2' C A 499 26.027-110.123 -17.988 1.00 52.00 C
ATOM 12 O2' C A 499 25.922-111.249 -17.147 1.00 53.58 O
ATOM 13 C1' C A 499 26.266-110.598 -19.422 1.00 54.01 C
ATOM 14 N1 C A 499 27.145-109.707 -20.202 1.00 55.47 N
ATOM 15 C2 C A 499 28.500-109.642 -19.894 1.00 56.33 C
ATOM 16 O2 C A 499 28.940-110.326 -18.978 1.00 56.36 O
ATOM 17 N3 C A 499 29.293-108.831 -20.603 1.00 60.13 N
ATOM 18 C4 C A 499 28.785-108.102 -21.593 1.00 62.07 C
ATOM 19 N4 C A 499 29.603-107.312 -22.267 1.00 71.28 N
ATOM 20 C5 C A 499 27.414-108.151 -21.934 1.00 58.92 C
ATOM 21 C6 C A 499 26.635-108.955 -21.221 1.00 56.72 C
ATOM 22 P C A 500 24.225-108.262 -15.789 1.00 52.73 P
ATOM 23 OP1 C A 500 23.200-108.437 -14.723 1.00 49.82 O
ATOM 24 OP2 C A 500 24.346-106.956 -16.489 1.00 47.37 O
ATOM 25 O5' C A 500 25.654-108.631 -15.187 1.00 58.30 O
TER
ATOM 1 O3' A B 497 24.344-105.494 -27.932 1.00 61.70 O
ATOM 2 P C B 498 23.670-105.385 -26.466 1.00 54.06 P
ATOM 3 OP1 C B 498 22.223-105.102 -26.621 1.00 54.21 O
ATOM 4 OP2 C B 498 24.491-104.456 -25.661 1.00 56.35 O
ATOM 5 O5' C B 498 23.868-106.832 -25.813 1.00 55.54 O
ATOM 6 C5' C B 498 22.946-107.897 -26.034 1.00 55.15 C
ATOM 7 C4' C B 498 23.348-109.112 -25.223 1.00 61.93 C
ATOM 8 O4' C B 498 24.504-109.771 -25.809 1.00 63.60 O
ATOM 9 C3' C B 498 23.774-108.825 -23.793 1.00 62.09 C
ATOM 10 O3' C B 498 22.661-108.677 -22.931 1.00 66.40 O
ATOM 11 C2' C B 498 24.668-110.015 -23.442 1.00 54.55 C
ATOM 12 O2' C B 498 24.009-111.183 -22.993 1.00 41.62 O
ATOM 13 C1' C B 498 25.334-110.300 -24.783 1.00 56.85 C
ATOM 14 N1 C B 498 26.672-109.677 -24.882 1.00 59.33 N
ATOM 15 C2 C B 498 27.793-110.426 -24.524 1.00 58.84 C
ATOM 16 O2 C B 498 27.635-111.575 -24.107 1.00 63.59 O
ATOM 17 N3 C B 498 29.018-109.879 -24.641 1.00 58.21 N
ATOM 18 C4 C B 498 29.150-108.633 -25.095 1.00 62.06 C
ATOM 19 N4 C B 498 30.386-108.140 -25.239 1.00 66.67 N
ATOM 20 C5 C B 498 28.026-107.836 -25.438 1.00 63.35 C
ATOM 21 C6 C B 498 26.817-108.392 -25.320 1.00 60.61 C
ATOM 22 P C B 499 22.716-107.597 -21.743 1.00 68.58 P
ATOM 23 OP1 C B 499 21.325-107.352 -21.295 1.00 59.23 O
ATOM 24 OP2 C B 499 23.567-106.454 -22.178 1.00 63.08 O
ATOM 25 O5' C B 499 23.484-108.339 -20.563 1.00 53.33 O
TER
Atoms:
C2: (28.500,-109.642,-19.894)
OP1: (21.325,-107.352,-21.295)
OP2: (23.567,-106.454,-22.178)
C4: (28.785,-108.102,-21.593)
O5': (23.484,-108.339,-20.563)
C3': (24.697,-109.394,-18.111)
C1': (26.266,-110.598,-19.422)
O4': (25.012,-110.661,-20.073)
C5': (22.921,-109.484,-19.951)
P: (22.716,-107.597,-21.743)
O2: (28.940,-110.326,-18.978)
C4': (23.975,-110.214,-19.167)
C2': (26.027,-110.123,-17.988)
O2': (25.922,-111.249,-17.147)
N1: (27.145,-109.707,-20.202)
N3: (29.293,-108.831,-20.603)
N4: (29.603,-107.312,-22.267)
C6: (26.635,-108.955,-21.221)
C5: (27.414,-108.151,-21.934)
O3': (23.964,-109.403,-16.888)
OP1: (21.325,-107.352,-21.295)
OP2: (23.567,-106.454,-22.178)
C4: (28.785,-108.102,-21.593)
O5': (23.484,-108.339,-20.563)
C3': (24.697,-109.394,-18.111)
C1': (26.266,-110.598,-19.422)
O4': (25.012,-110.661,-20.073)
C5': (22.921,-109.484,-19.951)
P: (22.716,-107.597,-21.743)
O2: (28.940,-110.326,-18.978)
C4': (23.975,-110.214,-19.167)
C2': (26.027,-110.123,-17.988)
O2': (25.922,-111.249,-17.147)
N1: (27.145,-109.707,-20.202)
N3: (29.293,-108.831,-20.603)
N4: (29.603,-107.312,-22.267)
C6: (26.635,-108.955,-21.221)
C5: (27.414,-108.151,-21.934)
O3': (23.964,-109.403,-16.888)
C2: (27.793,-110.426,-24.524)
OP1: (22.223,-105.102,-26.621)
OP2: (24.491,-104.456,-25.661)
C4: (29.150,-108.633,-25.095)
O5': (23.868,-106.832,-25.813)
C3': (23.774,-108.825,-23.793)
C1': (25.334,-110.300,-24.783)
O4': (24.504,-109.771,-25.809)
C5': (22.946,-107.897,-26.034)
P: (23.670,-105.385,-26.466)
O2: (27.635,-111.575,-24.107)
C4': (23.348,-109.112,-25.223)
C2': (24.668,-110.015,-23.442)
O2': (24.009,-111.183,-22.993)
N1: (26.672,-109.677,-24.882)
N3: (29.018,-109.879,-24.641)
N4: (30.386,-108.140,-25.239)
C6: (26.817,-108.392,-25.320)
C5: (28.026,-107.836,-25.438)
O3': (22.661,-108.677,-22.931)
OP1: (22.223,-105.102,-26.621)
OP2: (24.491,-104.456,-25.661)
C4: (29.150,-108.633,-25.095)
O5': (23.868,-106.832,-25.813)
C3': (23.774,-108.825,-23.793)
C1': (25.334,-110.300,-24.783)
O4': (24.504,-109.771,-25.809)
C5': (22.946,-107.897,-26.034)
P: (23.670,-105.385,-26.466)
O2: (27.635,-111.575,-24.107)
C4': (23.348,-109.112,-25.223)
C2': (24.668,-110.015,-23.442)
O2': (24.009,-111.183,-22.993)
N1: (26.672,-109.677,-24.882)
N3: (29.018,-109.879,-24.641)
N4: (30.386,-108.140,-25.239)
C6: (26.817,-108.392,-25.320)
C5: (28.026,-107.836,-25.438)
O3': (22.661,-108.677,-22.931)
Image (generated by PyMOL):