Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YVP:C7:C6
Extra
PDB:
ATOM 1 O3' C A 6 41.917 30.027 29.420 1.00 36.01 O
ATOM 2 P C A 7 40.964 31.189 29.994 1.00 38.81 P
ATOM 3 OP1 C A 7 41.813 32.397 30.110 1.00 38.44 O
ATOM 4 OP2 C A 7 40.264 30.669 31.192 1.00 36.03 O
ATOM 5 O5' C A 7 39.878 31.416 28.849 1.00 35.80 O
ATOM 6 C5' C A 7 40.249 31.962 27.585 1.00 35.95 C
ATOM 7 C4' C A 7 39.083 31.901 26.617 1.00 34.97 C
ATOM 8 O4' C A 7 38.673 30.516 26.460 1.00 35.81 O
ATOM 9 C3' C A 7 37.794 32.608 27.027 1.00 33.93 C
ATOM 10 O3' C A 7 37.840 34.004 26.725 1.00 32.76 O
ATOM 11 C2' C A 7 36.768 31.906 26.140 1.00 33.37 C
ATOM 12 O2' C A 7 36.750 32.387 24.810 1.00 33.41 O
ATOM 13 C1' C A 7 37.290 30.467 26.143 1.00 33.33 C
ATOM 14 N1 C A 7 36.593 29.635 27.137 1.00 32.13 N
ATOM 15 C2 C A 7 35.404 29.015 26.758 1.00 28.84 C
ATOM 16 O2 C A 7 35.018 29.136 25.596 1.00 30.14 O
ATOM 17 N3 C A 7 34.704 28.306 27.665 1.00 27.20 N
ATOM 18 C4 C A 7 35.149 28.202 28.913 1.00 27.76 C
ATOM 19 N4 C A 7 34.390 27.536 29.786 1.00 25.59 N
ATOM 20 C5 C A 7 36.386 28.789 29.324 1.00 27.95 C
ATOM 21 C6 C A 7 37.071 29.490 28.409 1.00 29.49 C
ATOM 22 P G A 8 37.631 35.089 27.898 1.00 35.91 P
ATOM 23 OP1 G A 8 37.785 36.435 27.298 1.00 35.51 O
ATOM 24 OP2 G A 8 38.488 34.693 29.048 1.00 34.30 O
ATOM 25 O5' G A 8 36.105 34.942 28.349 1.00 35.51 O
TER
ATOM 1 O3' U B 5 42.949 25.078 32.909 1.00 36.74 O
ATOM 2 P C B 6 42.136 26.454 33.086 1.00 37.75 P
ATOM 3 OP1 C B 6 43.026 27.406 33.789 1.00 36.27 O
ATOM 4 OP2 C B 6 40.801 26.127 33.660 1.00 35.30 O
ATOM 5 O5' C B 6 41.911 26.970 31.596 1.00 36.71 O
ATOM 6 C5' C B 6 43.012 27.291 30.751 1.00 35.27 C
ATOM 7 C4' C B 6 42.524 27.668 29.368 1.00 35.99 C
ATOM 8 O4' C B 6 41.935 26.511 28.709 1.00 36.22 O
ATOM 9 C3' C B 6 41.416 28.706 29.298 1.00 36.03 C
ATOM 10 O3' C B 6 41.917 30.027 29.420 1.00 36.01 O
ATOM 11 C2' C B 6 40.852 28.466 27.904 1.00 35.26 C
ATOM 12 O2' C B 6 41.644 29.053 26.891 1.00 34.83 O
ATOM 13 C1' C B 6 40.918 26.940 27.812 1.00 33.91 C
ATOM 14 N1 C B 6 39.647 26.312 28.211 1.00 34.12 N
ATOM 15 C2 C B 6 38.595 26.293 27.296 1.00 32.14 C
ATOM 16 O2 C B 6 38.767 26.792 26.179 1.00 34.66 O
ATOM 17 N3 C B 6 37.418 25.735 27.650 1.00 32.48 N
ATOM 18 C4 C B 6 37.270 25.213 28.867 1.00 30.94 C
ATOM 19 N4 C B 6 36.085 24.682 29.175 1.00 28.54 N
ATOM 20 C5 C B 6 38.329 25.213 29.822 1.00 31.45 C
ATOM 21 C6 C B 6 39.490 25.765 29.454 1.00 31.58 C
ATOM 22 P C B 7 40.964 31.189 29.994 1.00 38.81 P
ATOM 23 OP1 C B 7 41.813 32.397 30.110 1.00 38.44 O
ATOM 24 OP2 C B 7 40.264 30.669 31.192 1.00 36.03 O
ATOM 25 O5' C B 7 39.878 31.416 28.849 1.00 35.80 O
TER
ATOM 2 P C A 7 40.964 31.189 29.994 1.00 38.81 P
ATOM 3 OP1 C A 7 41.813 32.397 30.110 1.00 38.44 O
ATOM 4 OP2 C A 7 40.264 30.669 31.192 1.00 36.03 O
ATOM 5 O5' C A 7 39.878 31.416 28.849 1.00 35.80 O
ATOM 6 C5' C A 7 40.249 31.962 27.585 1.00 35.95 C
ATOM 7 C4' C A 7 39.083 31.901 26.617 1.00 34.97 C
ATOM 8 O4' C A 7 38.673 30.516 26.460 1.00 35.81 O
ATOM 9 C3' C A 7 37.794 32.608 27.027 1.00 33.93 C
ATOM 10 O3' C A 7 37.840 34.004 26.725 1.00 32.76 O
ATOM 11 C2' C A 7 36.768 31.906 26.140 1.00 33.37 C
ATOM 12 O2' C A 7 36.750 32.387 24.810 1.00 33.41 O
ATOM 13 C1' C A 7 37.290 30.467 26.143 1.00 33.33 C
ATOM 14 N1 C A 7 36.593 29.635 27.137 1.00 32.13 N
ATOM 15 C2 C A 7 35.404 29.015 26.758 1.00 28.84 C
ATOM 16 O2 C A 7 35.018 29.136 25.596 1.00 30.14 O
ATOM 17 N3 C A 7 34.704 28.306 27.665 1.00 27.20 N
ATOM 18 C4 C A 7 35.149 28.202 28.913 1.00 27.76 C
ATOM 19 N4 C A 7 34.390 27.536 29.786 1.00 25.59 N
ATOM 20 C5 C A 7 36.386 28.789 29.324 1.00 27.95 C
ATOM 21 C6 C A 7 37.071 29.490 28.409 1.00 29.49 C
ATOM 22 P G A 8 37.631 35.089 27.898 1.00 35.91 P
ATOM 23 OP1 G A 8 37.785 36.435 27.298 1.00 35.51 O
ATOM 24 OP2 G A 8 38.488 34.693 29.048 1.00 34.30 O
ATOM 25 O5' G A 8 36.105 34.942 28.349 1.00 35.51 O
TER
ATOM 1 O3' U B 5 42.949 25.078 32.909 1.00 36.74 O
ATOM 2 P C B 6 42.136 26.454 33.086 1.00 37.75 P
ATOM 3 OP1 C B 6 43.026 27.406 33.789 1.00 36.27 O
ATOM 4 OP2 C B 6 40.801 26.127 33.660 1.00 35.30 O
ATOM 5 O5' C B 6 41.911 26.970 31.596 1.00 36.71 O
ATOM 6 C5' C B 6 43.012 27.291 30.751 1.00 35.27 C
ATOM 7 C4' C B 6 42.524 27.668 29.368 1.00 35.99 C
ATOM 8 O4' C B 6 41.935 26.511 28.709 1.00 36.22 O
ATOM 9 C3' C B 6 41.416 28.706 29.298 1.00 36.03 C
ATOM 10 O3' C B 6 41.917 30.027 29.420 1.00 36.01 O
ATOM 11 C2' C B 6 40.852 28.466 27.904 1.00 35.26 C
ATOM 12 O2' C B 6 41.644 29.053 26.891 1.00 34.83 O
ATOM 13 C1' C B 6 40.918 26.940 27.812 1.00 33.91 C
ATOM 14 N1 C B 6 39.647 26.312 28.211 1.00 34.12 N
ATOM 15 C2 C B 6 38.595 26.293 27.296 1.00 32.14 C
ATOM 16 O2 C B 6 38.767 26.792 26.179 1.00 34.66 O
ATOM 17 N3 C B 6 37.418 25.735 27.650 1.00 32.48 N
ATOM 18 C4 C B 6 37.270 25.213 28.867 1.00 30.94 C
ATOM 19 N4 C B 6 36.085 24.682 29.175 1.00 28.54 N
ATOM 20 C5 C B 6 38.329 25.213 29.822 1.00 31.45 C
ATOM 21 C6 C B 6 39.490 25.765 29.454 1.00 31.58 C
ATOM 22 P C B 7 40.964 31.189 29.994 1.00 38.81 P
ATOM 23 OP1 C B 7 41.813 32.397 30.110 1.00 38.44 O
ATOM 24 OP2 C B 7 40.264 30.669 31.192 1.00 36.03 O
ATOM 25 O5' C B 7 39.878 31.416 28.849 1.00 35.80 O
TER
Atoms:
C2: (35.404,29.015,26.758)
OP1: (41.813,32.397,30.110)
OP2: (40.264,30.669,31.192)
C4: (35.149,28.202,28.913)
O5': (39.878,31.416,28.849)
C3': (37.794,32.608,27.027)
C1': (37.290,30.467,26.143)
O4': (38.673,30.516,26.460)
C5': (40.249,31.962,27.585)
P: (40.964,31.189,29.994)
O2: (35.018,29.136,25.596)
C4': (39.083,31.901,26.617)
C2': (36.768,31.906,26.140)
O2': (36.750,32.387,24.810)
N1: (36.593,29.635,27.137)
N3: (34.704,28.306,27.665)
N4: (34.390,27.536,29.786)
C6: (37.071,29.490,28.409)
C5: (36.386,28.789,29.324)
O3': (37.840,34.004,26.725)
OP1: (41.813,32.397,30.110)
OP2: (40.264,30.669,31.192)
C4: (35.149,28.202,28.913)
O5': (39.878,31.416,28.849)
C3': (37.794,32.608,27.027)
C1': (37.290,30.467,26.143)
O4': (38.673,30.516,26.460)
C5': (40.249,31.962,27.585)
P: (40.964,31.189,29.994)
O2: (35.018,29.136,25.596)
C4': (39.083,31.901,26.617)
C2': (36.768,31.906,26.140)
O2': (36.750,32.387,24.810)
N1: (36.593,29.635,27.137)
N3: (34.704,28.306,27.665)
N4: (34.390,27.536,29.786)
C6: (37.071,29.490,28.409)
C5: (36.386,28.789,29.324)
O3': (37.840,34.004,26.725)
C2: (38.595,26.293,27.296)
OP1: (43.026,27.406,33.789)
OP2: (40.801,26.127,33.660)
C4: (37.270,25.213,28.867)
O5': (41.911,26.970,31.596)
C3': (41.416,28.706,29.298)
C1': (40.918,26.940,27.812)
O4': (41.935,26.511,28.709)
C5': (43.012,27.291,30.751)
P: (42.136,26.454,33.086)
O2: (38.767,26.792,26.179)
C4': (42.524,27.668,29.368)
C2': (40.852,28.466,27.904)
O2': (41.644,29.053,26.891)
N1: (39.647,26.312,28.211)
N3: (37.418,25.735,27.650)
N4: (36.085,24.682,29.175)
C6: (39.490,25.765,29.454)
C5: (38.329,25.213,29.822)
O3': (41.917,30.027,29.420)
OP1: (43.026,27.406,33.789)
OP2: (40.801,26.127,33.660)
C4: (37.270,25.213,28.867)
O5': (41.911,26.970,31.596)
C3': (41.416,28.706,29.298)
C1': (40.918,26.940,27.812)
O4': (41.935,26.511,28.709)
C5': (43.012,27.291,30.751)
P: (42.136,26.454,33.086)
O2: (38.767,26.792,26.179)
C4': (42.524,27.668,29.368)
C2': (40.852,28.466,27.904)
O2': (41.644,29.053,26.891)
N1: (39.647,26.312,28.211)
N3: (37.418,25.735,27.650)
N4: (36.085,24.682,29.175)
C6: (39.490,25.765,29.454)
C5: (38.329,25.213,29.822)
O3': (41.917,30.027,29.420)
Image (generated by PyMOL):