ClaRNA

Doublet info:

Details

Nucleotide types: UU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3L0U:A59:A58

Extra

PDB:
ATOM 1 O3' U A 58 21.353 -26.877 -4.684 1.00 82.87 O
ATOM 2 P U A 59 22.561 -27.106 -5.714 1.00 85.06 P
ATOM 3 OP1 U A 59 22.976 -25.786 -6.238 1.00 84.27 O
ATOM 4 OP2 U A 59 22.158 -28.171 -6.653 1.00 87.28 O
ATOM 5 O5' U A 59 23.728 -27.695 -4.788 1.00 85.76 O
ATOM 6 C5' U A 59 24.182 -26.976 -3.643 1.00 84.09 C
ATOM 7 C4' U A 59 24.932 -27.892 -2.688 1.00 85.23 C
ATOM 8 O4' U A 59 24.114 -29.057 -2.405 1.00 85.67 O
ATOM 9 C3' U A 59 26.273 -28.419 -3.220 1.00 88.20 C
ATOM 10 O3' U A 59 27.345 -28.110 -2.311 1.00 88.61 O
ATOM 11 C2' U A 59 26.059 -29.928 -3.375 1.00 90.31 C
ATOM 12 O2' U A 59 27.202 -30.704 -3.052 1.00 92.44 O
ATOM 13 C1' U A 59 24.922 -30.208 -2.400 1.00 88.30 C
ATOM 14 N1 U A 59 24.090 -31.396 -2.783 1.00 89.63 N
ATOM 15 C2 U A 59 24.003 -32.481 -1.924 1.00 90.50 C
ATOM 16 O2 U A 59 24.562 -32.528 -0.843 1.00 90.39 O
ATOM 17 N3 U A 59 23.225 -33.518 -2.383 1.00 91.87 N
ATOM 18 C4 U A 59 22.543 -33.582 -3.588 1.00 92.68 C
ATOM 19 O4 U A 59 21.884 -34.579 -3.860 1.00 94.35 O
ATOM 20 C5 U A 59 22.682 -32.419 -4.431 1.00 91.78 C
ATOM 21 C6 U A 59 23.436 -31.396 -4.004 1.00 90.27 C
ATOM 22 P C A 60 28.294 -26.837 -2.551 1.00 88.73 P
ATOM 23 OP1 C A 60 28.540 -26.219 -1.230 1.00 87.06 O
ATOM 24 OP2 C A 60 27.719 -26.021 -3.643 1.00 87.81 O
ATOM 25 O5' C A 60 29.669 -27.476 -3.086 1.00 92.58 O
TER

ATOM 1 O3' A B 57 20.109 -31.017 -7.137 1.00 91.29 O
ATOM 2 P U B 58 18.566 -30.766 -6.822 1.00 89.43 P
ATOM 3 OP1 U B 58 17.934 -32.081 -6.579 1.00 90.66 O
ATOM 4 OP2 U B 58 18.034 -29.867 -7.873 1.00 89.55 O
ATOM 5 O5' U B 58 18.603 -29.952 -5.446 1.00 86.29 O
ATOM 6 C5' U B 58 18.759 -28.535 -5.465 1.00 84.73 C
ATOM 7 C4' U B 58 19.275 -28.019 -4.133 1.00 82.64 C
ATOM 8 O4' U B 58 18.856 -28.890 -3.056 1.00 82.37 O
ATOM 9 C3' U B 58 20.780 -27.985 -3.984 1.00 83.30 C
ATOM 10 O3' U B 58 21.353 -26.877 -4.684 1.00 82.87 O
ATOM 11 C2' U B 58 20.919 -27.873 -2.469 1.00 81.81 C
ATOM 12 O2' U B 58 20.804 -26.544 -1.999 1.00 80.03 O
ATOM 13 C1' U B 58 19.750 -28.726 -1.962 1.00 81.73 C
ATOM 14 N1 U B 58 20.161 -30.085 -1.417 1.00 83.60 N
ATOM 15 C2 U B 58 20.872 -30.146 -0.225 1.00 83.33 C
ATOM 16 O2 U B 58 21.194 -29.159 0.416 1.00 81.68 O
ATOM 17 N3 U B 58 21.199 -31.417 0.194 1.00 85.25 N
ATOM 18 C4 U B 58 20.892 -32.612 -0.441 1.00 87.53 C
ATOM 19 O4 U B 58 21.255 -33.680 0.056 1.00 89.39 O
ATOM 20 C5 U B 58 20.149 -32.473 -1.674 1.00 87.63 C
ATOM 21 C6 U B 58 19.820 -31.243 -2.104 1.00 85.75 C
ATOM 22 P U B 59 22.561 -27.106 -5.714 1.00 85.06 P
ATOM 23 OP1 U B 59 22.976 -25.786 -6.238 1.00 84.27 O
ATOM 24 OP2 U B 59 22.158 -28.171 -6.653 1.00 87.28 O
ATOM 25 O5' U B 59 23.728 -27.695 -4.788 1.00 85.76 O
TER

Atoms:
C4: (22.543,-33.582,-3.588)
N3: (23.225,-33.518,-2.383)
OP1: (22.976,-25.786,-6.238)
OP2: (22.158,-28.171,-6.653)
C2: (24.003,-32.481,-1.924)
C1': (24.922,-30.208,-2.400)
C3': (26.273,-28.419,-3.220)
O5': (23.728,-27.695,-4.788)
O4': (24.114,-29.057,-2.405)
C5': (24.182,-26.976,-3.643)
P: (22.561,-27.106,-5.714)
C4': (24.932,-27.892,-2.688)
C2': (26.059,-29.928,-3.375)
O2': (27.202,-30.704,-3.052)
N1: (24.090,-31.396,-2.783)
O4: (21.884,-34.579,-3.860)
O2: (24.562,-32.528,-0.843)
C6: (23.436,-31.396,-4.004)
C5: (22.682,-32.419,-4.431)
O3': (27.345,-28.110,-2.311)
C4: (20.892,-32.612,-0.441)
N3: (21.199,-31.417,0.194)
OP1: (17.934,-32.081,-6.579)
OP2: (18.034,-29.867,-7.873)
C2: (20.872,-30.146,-0.225)
C1': (19.750,-28.726,-1.962)
C3': (20.780,-27.985,-3.984)
O5': (18.603,-29.952,-5.446)
O4': (18.856,-28.890,-3.056)
C5': (18.759,-28.535,-5.465)
P: (18.566,-30.766,-6.822)
C4': (19.275,-28.019,-4.133)
C2': (20.919,-27.873,-2.469)
O2': (20.804,-26.544,-1.999)
N1: (20.161,-30.085,-1.417)
O4: (21.255,-33.680,0.056)
O2: (21.194,-29.159,0.416)
C6: (19.820,-31.243,-2.104)
C5: (20.149,-32.473,-1.674)
O3': (21.353,-26.877,-4.684)
Image (generated by PyMOL):
PyMOL image
show in jmol