ClaRNA

Doublet info:

Details

Nucleotide types: CC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2QBZ:X54:X53

Extra

PDB:
ATOM 1 O3' C A 53 27.477 3.505 85.958 1.00 24.02 O
ATOM 2 P C A 54 27.064 3.148 84.449 1.00 23.33 P
ATOM 3 OP1 C A 54 25.634 2.824 84.437 1.00 24.10 O
ATOM 4 OP2 C A 54 28.086 2.237 83.873 1.00 23.03 O
ATOM 5 O5' C A 54 27.219 4.533 83.676 1.00 24.76 O
ATOM 6 C5' C A 54 26.174 5.482 83.539 1.00 23.98 C
ATOM 7 C4' C A 54 26.666 6.557 82.584 1.00 23.29 C
ATOM 8 O4' C A 54 27.959 7.098 82.962 1.00 21.49 O
ATOM 9 C3' C A 54 26.932 6.007 81.191 1.00 22.13 C
ATOM 10 O3' C A 54 25.695 5.824 80.598 1.00 20.10 O
ATOM 11 C2' C A 54 27.694 7.199 80.627 1.00 22.25 C
ATOM 12 O2' C A 54 26.815 8.289 80.422 1.00 24.41 O
ATOM 13 C1' C A 54 28.653 7.477 81.785 1.00 21.16 C
ATOM 14 N1 C A 54 29.969 6.749 81.700 1.00 21.83 N
ATOM 15 C2 C A 54 31.086 7.375 81.118 1.00 22.34 C
ATOM 16 O2 C A 54 30.962 8.519 80.695 1.00 25.58 O
ATOM 17 N3 C A 54 32.288 6.734 81.025 1.00 21.25 N
ATOM 18 C4 C A 54 32.406 5.486 81.485 1.00 21.99 C
ATOM 19 N4 C A 54 33.598 4.893 81.373 1.00 21.06 N
ATOM 20 C5 C A 54 31.295 4.799 82.081 1.00 22.04 C
ATOM 21 C6 C A 54 30.111 5.459 82.161 1.00 22.69 C
ATOM 22 P A A 55 25.355 4.778 79.445 1.00 20.66 P
ATOM 23 OP1 A A 55 23.886 4.906 79.281 1.00 19.34 O
ATOM 24 OP2 A A 55 26.045 3.519 79.774 1.00 21.56 O
ATOM 25 O5' A A 55 26.038 5.323 78.112 1.00 21.48 O
TER

ATOM 1 O3' U B 52 32.074 1.205 89.035 1.00 26.49 O
ATOM 2 P C B 53 31.298 0.971 87.650 1.00 26.81 P
ATOM 3 OP1 C B 53 30.308 -0.098 87.901 1.00 25.75 O
ATOM 4 OP2 C B 53 32.307 0.938 86.559 1.00 24.48 O
ATOM 5 O5' C B 53 30.436 2.290 87.423 1.00 26.42 O
ATOM 6 C5' C B 53 29.489 2.777 88.365 1.00 25.78 C
ATOM 7 C4' C B 53 28.964 4.074 87.798 1.00 25.84 C
ATOM 8 O4' C B 53 29.966 5.113 87.984 1.00 26.11 O
ATOM 9 C3' C B 53 28.734 4.061 86.282 1.00 24.03 C
ATOM 10 O3' C B 53 27.477 3.505 85.958 1.00 24.02 O
ATOM 11 C2' C B 53 28.751 5.549 85.983 1.00 24.33 C
ATOM 12 O2' C B 53 27.559 6.200 86.345 1.00 23.41 O
ATOM 13 C1' C B 53 29.882 6.017 86.882 1.00 24.65 C
ATOM 14 N1 C B 53 31.159 6.149 86.094 1.00 24.97 N
ATOM 15 C2 C B 53 31.298 7.320 85.343 1.00 25.52 C
ATOM 16 O2 C B 53 30.378 8.145 85.382 1.00 26.13 O
ATOM 17 N3 C B 53 32.417 7.508 84.603 1.00 25.75 N
ATOM 18 C4 C B 53 33.370 6.575 84.602 1.00 24.65 C
ATOM 19 N4 C B 53 34.449 6.821 83.869 1.00 23.97 N
ATOM 20 C5 C B 53 33.257 5.374 85.351 1.00 23.76 C
ATOM 21 C6 C B 53 32.138 5.192 86.072 1.00 23.87 C
ATOM 22 P C B 54 27.064 3.148 84.449 1.00 23.33 P
ATOM 23 OP1 C B 54 25.634 2.824 84.437 1.00 24.10 O
ATOM 24 OP2 C B 54 28.086 2.237 83.873 1.00 23.03 O
ATOM 25 O5' C B 54 27.219 4.533 83.676 1.00 24.76 O
TER

Atoms:
C2: (31.086,7.375,81.118)
OP1: (25.634,2.824,84.437)
OP2: (28.086,2.237,83.873)
C4: (32.406,5.486,81.485)
O5': (27.219,4.533,83.676)
C3': (26.932,6.007,81.191)
C1': (28.653,7.477,81.785)
O4': (27.959,7.098,82.962)
C5': (26.174,5.482,83.539)
P: (27.064,3.148,84.449)
O2: (30.962,8.519,80.695)
C4': (26.666,6.557,82.584)
C2': (27.694,7.199,80.627)
O2': (26.815,8.289,80.422)
N1: (29.969,6.749,81.700)
N3: (32.288,6.734,81.025)
N4: (33.598,4.893,81.373)
C6: (30.111,5.459,82.161)
C5: (31.295,4.799,82.081)
O3': (25.695,5.824,80.598)
C2: (31.298,7.320,85.343)
OP1: (30.308,-0.098,87.901)
OP2: (32.307,0.938,86.559)
C4: (33.370,6.575,84.602)
O5': (30.436,2.290,87.423)
C3': (28.734,4.061,86.282)
C1': (29.882,6.017,86.882)
O4': (29.966,5.113,87.984)
C5': (29.489,2.777,88.365)
P: (31.298,0.971,87.650)
O2: (30.378,8.145,85.382)
C4': (28.964,4.074,87.798)
C2': (28.751,5.549,85.983)
O2': (27.559,6.200,86.345)
N1: (31.159,6.149,86.094)
N3: (32.417,7.508,84.603)
N4: (34.449,6.821,83.869)
C6: (32.138,5.192,86.072)
C5: (33.257,5.374,85.351)
O3': (27.477,3.505,85.958)
Image (generated by PyMOL):
PyMOL image
show in jmol