ClaRNA

Doublet info:

Details

Nucleotide types: UU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3L3C:P135:P71

Extra

PDB:
ATOM 1 O3' G A 134 25.863 79.685 -1.538 1.00118.75 O
ATOM 2 P U A 135 25.427 81.045 -0.816 1.00119.11 P
ATOM 3 OP1 U A 135 25.163 82.054 -1.867 1.00119.20 O
ATOM 4 OP2 U A 135 26.414 81.330 0.250 1.00119.02 O
ATOM 5 O5' U A 135 24.029 80.661 -0.140 1.00119.51 O
ATOM 6 C5' U A 135 23.275 81.652 0.548 1.00120.21 C
ATOM 7 C4' U A 135 22.023 82.015 -0.229 1.00120.77 C
ATOM 8 O4' U A 135 21.166 80.849 -0.332 1.00120.60 O
ATOM 9 C3' U A 135 21.164 83.098 0.408 1.00121.32 C
ATOM 10 O3' U A 135 21.561 84.378 -0.068 1.00122.53 O
ATOM 11 C2' U A 135 19.767 82.730 -0.078 1.00120.88 C
ATOM 12 O2' U A 135 19.517 83.183 -1.394 1.00120.87 O
ATOM 13 C1' U A 135 19.827 81.207 -0.048 1.00120.48 C
ATOM 14 N1 U A 135 19.455 80.624 1.273 1.00120.06 N
ATOM 15 C2 U A 135 18.207 80.060 1.435 1.00119.91 C
ATOM 16 O2 U A 135 17.378 80.009 0.544 1.00119.97 O
ATOM 17 N3 U A 135 17.962 79.552 2.686 1.00119.60 N
ATOM 18 C4 U A 135 18.822 79.553 3.769 1.00119.51 C
ATOM 19 O4 U A 135 18.463 79.060 4.834 1.00119.39 O
ATOM 20 C5 U A 135 20.104 80.160 3.522 1.00119.61 C
ATOM 21 C6 U A 135 20.365 80.662 2.309 1.00119.85 C
ATOM 22 P G A 136 21.575 84.678 -1.640 1.00123.48 P
ATOM 23 OP1 G A 136 21.608 83.380 -2.351 1.00123.47 O
ATOM 24 OP2 G A 136 22.623 85.690 -1.901 1.00123.38 O
ATOM 25 O5' G A 136 20.140 85.340 -1.891 1.00123.97 O
TER

ATOM 1 O3' G B 70 24.582 80.172 5.059 1.00 93.44 O
ATOM 2 P U B 71 24.204 81.668 5.497 1.00 96.52 P
ATOM 3 OP1 U B 71 22.750 81.864 5.292 1.00 96.36 O
ATOM 4 OP2 U B 71 25.167 82.594 4.856 1.00 96.44 O
ATOM 5 O5' U B 71 24.504 81.650 7.065 1.00 99.24 O
ATOM 6 C5' U B 71 25.841 81.542 7.533 1.00104.21 C
ATOM 7 C4' U B 71 25.983 82.350 8.809 1.00108.07 C
ATOM 8 O4' U B 71 27.269 82.128 9.440 1.00109.15 O
ATOM 9 C3' U B 71 25.853 83.861 8.643 1.00110.25 C
ATOM 10 O3' U B 71 25.146 84.483 9.742 1.00112.95 O
ATOM 11 C2' U B 71 27.312 84.314 8.521 1.00110.36 C
ATOM 12 O2' U B 71 27.526 85.632 8.993 1.00110.42 O
ATOM 13 C1' U B 71 28.079 83.289 9.369 1.00110.29 C
ATOM 14 N1 U B 71 29.439 82.809 8.890 1.00111.00 N
ATOM 15 C2 U B 71 30.034 83.216 7.696 1.00111.43 C
ATOM 16 O2 U B 71 29.550 84.005 6.900 1.00111.51 O
ATOM 17 N3 U B 71 31.267 82.652 7.447 1.00111.78 N
ATOM 18 C4 U B 71 31.957 81.743 8.235 1.00111.88 C
ATOM 19 O4 U B 71 33.056 81.329 7.876 1.00112.11 O
ATOM 20 C5 U B 71 31.282 81.365 9.452 1.00111.69 C
ATOM 21 C6 U B 71 30.082 81.900 9.719 1.00111.33 C
ATOM 22 P U B 72 24.458 83.708 10.975 1.00115.22 P
ATOM 23 OP1 U B 72 23.646 82.570 10.481 1.00115.13 O
ATOM 24 OP2 U B 72 23.785 84.746 11.785 1.00115.42 O
ATOM 25 O5' U B 72 25.720 83.170 11.808 1.00116.82 O
TER

Atoms:
C4: (18.822,79.553,3.769)
N3: (17.962,79.552,2.686)
OP1: (25.163,82.054,-1.867)
OP2: (26.414,81.330,0.250)
C2: (18.207,80.060,1.435)
C1': (19.827,81.207,-0.048)
C3': (21.164,83.098,0.408)
O5': (24.029,80.661,-0.140)
O4': (21.166,80.849,-0.332)
C5': (23.275,81.652,0.548)
P: (25.427,81.045,-0.816)
C4': (22.023,82.015,-0.229)
C2': (19.767,82.730,-0.078)
O2': (19.517,83.183,-1.394)
N1: (19.455,80.624,1.273)
O4: (18.463,79.060,4.834)
O2: (17.378,80.009,0.544)
C6: (20.365,80.662,2.309)
C5: (20.104,80.160,3.522)
O3': (21.561,84.378,-0.068)
C4: (31.957,81.743,8.235)
N3: (31.267,82.652,7.447)
OP1: (22.750,81.864,5.292)
OP2: (25.167,82.594,4.856)
C2: (30.034,83.216,7.696)
C1': (28.079,83.289,9.369)
C3': (25.853,83.861,8.643)
O5': (24.504,81.650,7.065)
O4': (27.269,82.128,9.440)
C5': (25.841,81.542,7.533)
P: (24.204,81.668,5.497)
C4': (25.983,82.350,8.809)
C2': (27.312,84.314,8.521)
O2': (27.526,85.632,8.993)
N1: (29.439,82.809,8.890)
O4: (33.056,81.329,7.876)
O2: (29.550,84.005,6.900)
C6: (30.082,81.900,9.719)
C5: (31.282,81.365,9.452)
O3': (25.146,84.483,9.742)
Image (generated by PyMOL):
PyMOL image
show in jmol