Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A2435:A2434
Extra
PDB:
ATOM 1 O3' C A2434 87.717 121.411 129.913 1.00 43.19 O
ATOM 2 P C A2435 87.435 122.035 131.360 1.00 45.87 P
ATOM 3 OP1 C A2435 88.325 121.273 132.253 1.00 44.52 O
ATOM 4 OP2 C A2435 85.974 122.098 131.649 1.00 45.64 O
ATOM 5 O5' C A2435 87.988 123.517 131.241 1.00 44.10 O
ATOM 6 C5' C A2435 89.365 123.758 130.934 1.00 43.16 C
ATOM 7 C4' C A2435 89.609 125.235 130.790 1.00 43.82 C
ATOM 8 O4' C A2435 88.893 125.734 129.628 1.00 44.45 O
ATOM 9 C3' C A2435 89.045 126.110 131.897 1.00 44.30 C
ATOM 10 O3' C A2435 89.763 126.109 133.114 1.00 45.50 O
ATOM 11 C2' C A2435 89.053 127.470 131.228 1.00 43.52 C
ATOM 12 O2' C A2435 90.351 128.018 131.114 1.00 43.03 O
ATOM 13 C1' C A2435 88.512 127.093 129.857 1.00 43.73 C
ATOM 14 N1 C A2435 87.040 127.202 129.917 1.00 43.38 N
ATOM 15 C2 C A2435 86.462 128.408 129.558 1.00 43.41 C
ATOM 16 O2 C A2435 87.195 129.340 129.206 1.00 42.29 O
ATOM 17 N3 C A2435 85.123 128.540 129.611 1.00 43.27 N
ATOM 18 C4 C A2435 84.363 127.519 130.001 1.00 42.28 C
ATOM 19 N4 C A2435 83.041 127.693 130.005 1.00 41.21 N
ATOM 20 C5 C A2435 84.924 126.276 130.392 1.00 43.01 C
ATOM 21 C6 C A2435 86.257 126.159 130.333 1.00 43.31 C
ATOM 22 P U A2436 89.099 126.783 134.430 1.00 47.57 P
ATOM 23 OP1 U A2436 90.174 126.757 135.436 1.00 47.82 O
ATOM 24 OP2 U A2436 87.779 126.157 134.752 1.00 44.32 O
ATOM 25 O5' U A2436 88.875 128.313 134.018 1.00 47.30 O
TER
ATOM 1 O3' G B2433 82.742 119.149 127.355 1.00 44.85 O
ATOM 2 P C B2434 83.184 119.794 128.773 1.00 44.01 P
ATOM 3 OP1 C B2434 83.547 118.653 129.652 1.00 41.79 O
ATOM 4 OP2 C B2434 82.217 120.809 129.253 1.00 43.11 O
ATOM 5 O5' C B2434 84.516 120.561 128.409 1.00 41.72 O
ATOM 6 C5' C B2434 85.703 119.834 128.097 1.00 41.87 C
ATOM 7 C4' C B2434 86.810 120.794 127.769 1.00 41.43 C
ATOM 8 O4' C B2434 86.495 121.545 126.566 1.00 41.22 O
ATOM 9 C3' C B2434 87.003 121.884 128.799 1.00 42.04 C
ATOM 10 O3' C B2434 87.717 121.411 129.913 1.00 43.19 O
ATOM 11 C2' C B2434 87.781 122.920 128.013 1.00 42.29 C
ATOM 12 O2' C B2434 89.153 122.592 127.899 1.00 45.12 O
ATOM 13 C1' C B2434 87.072 122.844 126.656 1.00 40.41 C
ATOM 14 N1 C B2434 86.006 123.861 126.611 1.00 37.60 N
ATOM 15 C2 C B2434 86.346 125.163 126.262 1.00 37.32 C
ATOM 16 O2 C B2434 87.503 125.401 125.881 1.00 36.74 O
ATOM 17 N3 C B2434 85.410 126.134 126.347 1.00 38.28 N
ATOM 18 C4 C B2434 84.169 125.837 126.742 1.00 37.46 C
ATOM 19 N4 C B2434 83.297 126.832 126.873 1.00 36.68 N
ATOM 20 C5 C B2434 83.776 124.507 127.037 1.00 37.49 C
ATOM 21 C6 C B2434 84.717 123.556 126.958 1.00 37.69 C
ATOM 22 P C B2435 87.435 122.035 131.360 1.00 45.87 P
ATOM 23 OP1 C B2435 88.325 121.273 132.253 1.00 44.52 O
ATOM 24 OP2 C B2435 85.974 122.098 131.649 1.00 45.64 O
ATOM 25 O5' C B2435 87.988 123.517 131.241 1.00 44.10 O
TER
ATOM 2 P C A2435 87.435 122.035 131.360 1.00 45.87 P
ATOM 3 OP1 C A2435 88.325 121.273 132.253 1.00 44.52 O
ATOM 4 OP2 C A2435 85.974 122.098 131.649 1.00 45.64 O
ATOM 5 O5' C A2435 87.988 123.517 131.241 1.00 44.10 O
ATOM 6 C5' C A2435 89.365 123.758 130.934 1.00 43.16 C
ATOM 7 C4' C A2435 89.609 125.235 130.790 1.00 43.82 C
ATOM 8 O4' C A2435 88.893 125.734 129.628 1.00 44.45 O
ATOM 9 C3' C A2435 89.045 126.110 131.897 1.00 44.30 C
ATOM 10 O3' C A2435 89.763 126.109 133.114 1.00 45.50 O
ATOM 11 C2' C A2435 89.053 127.470 131.228 1.00 43.52 C
ATOM 12 O2' C A2435 90.351 128.018 131.114 1.00 43.03 O
ATOM 13 C1' C A2435 88.512 127.093 129.857 1.00 43.73 C
ATOM 14 N1 C A2435 87.040 127.202 129.917 1.00 43.38 N
ATOM 15 C2 C A2435 86.462 128.408 129.558 1.00 43.41 C
ATOM 16 O2 C A2435 87.195 129.340 129.206 1.00 42.29 O
ATOM 17 N3 C A2435 85.123 128.540 129.611 1.00 43.27 N
ATOM 18 C4 C A2435 84.363 127.519 130.001 1.00 42.28 C
ATOM 19 N4 C A2435 83.041 127.693 130.005 1.00 41.21 N
ATOM 20 C5 C A2435 84.924 126.276 130.392 1.00 43.01 C
ATOM 21 C6 C A2435 86.257 126.159 130.333 1.00 43.31 C
ATOM 22 P U A2436 89.099 126.783 134.430 1.00 47.57 P
ATOM 23 OP1 U A2436 90.174 126.757 135.436 1.00 47.82 O
ATOM 24 OP2 U A2436 87.779 126.157 134.752 1.00 44.32 O
ATOM 25 O5' U A2436 88.875 128.313 134.018 1.00 47.30 O
TER
ATOM 1 O3' G B2433 82.742 119.149 127.355 1.00 44.85 O
ATOM 2 P C B2434 83.184 119.794 128.773 1.00 44.01 P
ATOM 3 OP1 C B2434 83.547 118.653 129.652 1.00 41.79 O
ATOM 4 OP2 C B2434 82.217 120.809 129.253 1.00 43.11 O
ATOM 5 O5' C B2434 84.516 120.561 128.409 1.00 41.72 O
ATOM 6 C5' C B2434 85.703 119.834 128.097 1.00 41.87 C
ATOM 7 C4' C B2434 86.810 120.794 127.769 1.00 41.43 C
ATOM 8 O4' C B2434 86.495 121.545 126.566 1.00 41.22 O
ATOM 9 C3' C B2434 87.003 121.884 128.799 1.00 42.04 C
ATOM 10 O3' C B2434 87.717 121.411 129.913 1.00 43.19 O
ATOM 11 C2' C B2434 87.781 122.920 128.013 1.00 42.29 C
ATOM 12 O2' C B2434 89.153 122.592 127.899 1.00 45.12 O
ATOM 13 C1' C B2434 87.072 122.844 126.656 1.00 40.41 C
ATOM 14 N1 C B2434 86.006 123.861 126.611 1.00 37.60 N
ATOM 15 C2 C B2434 86.346 125.163 126.262 1.00 37.32 C
ATOM 16 O2 C B2434 87.503 125.401 125.881 1.00 36.74 O
ATOM 17 N3 C B2434 85.410 126.134 126.347 1.00 38.28 N
ATOM 18 C4 C B2434 84.169 125.837 126.742 1.00 37.46 C
ATOM 19 N4 C B2434 83.297 126.832 126.873 1.00 36.68 N
ATOM 20 C5 C B2434 83.776 124.507 127.037 1.00 37.49 C
ATOM 21 C6 C B2434 84.717 123.556 126.958 1.00 37.69 C
ATOM 22 P C B2435 87.435 122.035 131.360 1.00 45.87 P
ATOM 23 OP1 C B2435 88.325 121.273 132.253 1.00 44.52 O
ATOM 24 OP2 C B2435 85.974 122.098 131.649 1.00 45.64 O
ATOM 25 O5' C B2435 87.988 123.517 131.241 1.00 44.10 O
TER
Atoms:
C2: (86.462,128.408,129.558)
OP1: (88.325,121.273,132.253)
OP2: (85.974,122.098,131.649)
C4: (84.363,127.519,130.001)
O5': (87.988,123.517,131.241)
C3': (89.045,126.110,131.897)
C1': (88.512,127.093,129.857)
O4': (88.893,125.734,129.628)
C5': (89.365,123.758,130.934)
P: (87.435,122.035,131.360)
O2: (87.195,129.340,129.206)
C4': (89.609,125.235,130.790)
C2': (89.053,127.470,131.228)
O2': (90.351,128.018,131.114)
N1: (87.040,127.202,129.917)
N3: (85.123,128.540,129.611)
N4: (83.041,127.693,130.005)
C6: (86.257,126.159,130.333)
C5: (84.924,126.276,130.392)
O3': (89.763,126.109,133.114)
OP1: (88.325,121.273,132.253)
OP2: (85.974,122.098,131.649)
C4: (84.363,127.519,130.001)
O5': (87.988,123.517,131.241)
C3': (89.045,126.110,131.897)
C1': (88.512,127.093,129.857)
O4': (88.893,125.734,129.628)
C5': (89.365,123.758,130.934)
P: (87.435,122.035,131.360)
O2: (87.195,129.340,129.206)
C4': (89.609,125.235,130.790)
C2': (89.053,127.470,131.228)
O2': (90.351,128.018,131.114)
N1: (87.040,127.202,129.917)
N3: (85.123,128.540,129.611)
N4: (83.041,127.693,130.005)
C6: (86.257,126.159,130.333)
C5: (84.924,126.276,130.392)
O3': (89.763,126.109,133.114)
C2: (86.346,125.163,126.262)
OP1: (83.547,118.653,129.652)
OP2: (82.217,120.809,129.253)
C4: (84.169,125.837,126.742)
O5': (84.516,120.561,128.409)
C3': (87.003,121.884,128.799)
C1': (87.072,122.844,126.656)
O4': (86.495,121.545,126.566)
C5': (85.703,119.834,128.097)
P: (83.184,119.794,128.773)
O2: (87.503,125.401,125.881)
C4': (86.810,120.794,127.769)
C2': (87.781,122.920,128.013)
O2': (89.153,122.592,127.899)
N1: (86.006,123.861,126.611)
N3: (85.410,126.134,126.347)
N4: (83.297,126.832,126.873)
C6: (84.717,123.556,126.958)
C5: (83.776,124.507,127.037)
O3': (87.717,121.411,129.913)
OP1: (83.547,118.653,129.652)
OP2: (82.217,120.809,129.253)
C4: (84.169,125.837,126.742)
O5': (84.516,120.561,128.409)
C3': (87.003,121.884,128.799)
C1': (87.072,122.844,126.656)
O4': (86.495,121.545,126.566)
C5': (85.703,119.834,128.097)
P: (83.184,119.794,128.773)
O2: (87.503,125.401,125.881)
C4': (86.810,120.794,127.769)
C2': (87.781,122.920,128.013)
O2': (89.153,122.592,127.899)
N1: (86.006,123.861,126.611)
N3: (85.410,126.134,126.347)
N4: (83.297,126.832,126.873)
C6: (84.717,123.556,126.958)
C5: (83.776,124.507,127.037)
O3': (87.717,121.411,129.913)
Image (generated by PyMOL):