Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0626:0625
Extra
PDB:
ATOM 1 O3' C A 625 35.593 131.588 83.247 1.00 36.15 O
ATOM 2 P C A 626 35.454 130.512 82.076 1.00 38.96 P
ATOM 3 OP1 C A 626 34.332 129.611 82.445 1.00 39.11 O
ATOM 4 OP2 C A 626 36.794 129.946 81.807 1.00 37.90 O
ATOM 5 O5' C A 626 35.052 131.379 80.804 1.00 38.02 O
ATOM 6 C5' C A 626 33.760 132.004 80.739 1.00 40.21 C
ATOM 7 C4' C A 626 33.629 132.846 79.493 1.00 39.21 C
ATOM 8 O4' C A 626 34.596 133.924 79.514 1.00 37.92 O
ATOM 9 C3' C A 626 33.883 132.140 78.179 1.00 38.81 C
ATOM 10 O3' C A 626 32.732 131.430 77.762 1.00 37.46 O
ATOM 11 C2' C A 626 34.209 133.306 77.260 1.00 39.82 C
ATOM 12 O2' C A 626 33.066 134.038 76.872 1.00 43.12 O
ATOM 13 C1' C A 626 35.022 134.196 78.194 1.00 39.31 C
ATOM 14 N1 C A 626 36.467 133.949 78.109 1.00 41.52 N
ATOM 15 C2 C A 626 37.192 134.575 77.099 1.00 43.35 C
ATOM 16 O2 C A 626 36.588 135.276 76.268 1.00 44.35 O
ATOM 17 N3 C A 626 38.530 134.400 77.045 1.00 44.28 N
ATOM 18 C4 C A 626 39.136 133.630 77.942 1.00 42.76 C
ATOM 19 N4 C A 626 40.455 133.504 77.861 1.00 45.40 N
ATOM 20 C5 C A 626 38.418 132.958 78.962 1.00 42.23 C
ATOM 21 C6 C A 626 37.099 133.139 79.008 1.00 41.86 C
ATOM 22 P A A 627 32.863 130.308 76.622 1.00 40.87 P
ATOM 23 OP1 A A 627 31.518 129.692 76.499 1.00 40.54 O
ATOM 24 OP2 A A 627 34.045 129.448 76.880 1.00 38.95 O
ATOM 25 O5' A A 627 33.159 131.135 75.297 1.00 38.07 O
TER
ATOM 1 O3' G B 624 40.979 130.987 85.960 1.00 37.04 O
ATOM 2 P C B 625 40.145 130.251 84.806 1.00 35.69 P
ATOM 3 OP1 C B 625 39.435 129.115 85.424 1.00 34.98 O
ATOM 4 OP2 C B 625 41.030 130.009 83.659 1.00 34.81 O
ATOM 5 O5' C B 625 39.073 131.345 84.382 1.00 37.36 O
ATOM 6 C5' C B 625 38.044 131.770 85.303 1.00 38.47 C
ATOM 7 C4' C B 625 37.163 132.808 84.654 1.00 38.08 C
ATOM 8 O4' C B 625 37.909 134.038 84.481 1.00 39.01 O
ATOM 9 C3' C B 625 36.710 132.455 83.251 1.00 38.68 C
ATOM 10 O3' C B 625 35.593 131.588 83.247 1.00 36.15 O
ATOM 11 C2' C B 625 36.430 133.817 82.639 1.00 38.55 C
ATOM 12 O2' C B 625 35.190 134.362 83.048 1.00 37.23 O
ATOM 13 C1' C B 625 37.568 134.640 83.241 1.00 38.18 C
ATOM 14 N1 C B 625 38.785 134.690 82.410 1.00 38.37 N
ATOM 15 C2 C B 625 38.864 135.619 81.366 1.00 38.16 C
ATOM 16 O2 C B 625 37.893 136.346 81.134 1.00 39.06 O
ATOM 17 N3 C B 625 39.997 135.700 80.641 1.00 36.64 N
ATOM 18 C4 C B 625 41.025 134.906 80.924 1.00 36.91 C
ATOM 19 N4 C B 625 42.134 135.043 80.209 1.00 38.38 N
ATOM 20 C5 C B 625 40.964 133.937 81.958 1.00 37.76 C
ATOM 21 C6 C B 625 39.836 133.858 82.665 1.00 37.78 C
ATOM 22 P C B 626 35.454 130.512 82.076 1.00 38.96 P
ATOM 23 OP1 C B 626 34.332 129.611 82.445 1.00 39.11 O
ATOM 24 OP2 C B 626 36.794 129.946 81.807 1.00 37.90 O
ATOM 25 O5' C B 626 35.052 131.379 80.804 1.00 38.02 O
TER
ATOM 2 P C A 626 35.454 130.512 82.076 1.00 38.96 P
ATOM 3 OP1 C A 626 34.332 129.611 82.445 1.00 39.11 O
ATOM 4 OP2 C A 626 36.794 129.946 81.807 1.00 37.90 O
ATOM 5 O5' C A 626 35.052 131.379 80.804 1.00 38.02 O
ATOM 6 C5' C A 626 33.760 132.004 80.739 1.00 40.21 C
ATOM 7 C4' C A 626 33.629 132.846 79.493 1.00 39.21 C
ATOM 8 O4' C A 626 34.596 133.924 79.514 1.00 37.92 O
ATOM 9 C3' C A 626 33.883 132.140 78.179 1.00 38.81 C
ATOM 10 O3' C A 626 32.732 131.430 77.762 1.00 37.46 O
ATOM 11 C2' C A 626 34.209 133.306 77.260 1.00 39.82 C
ATOM 12 O2' C A 626 33.066 134.038 76.872 1.00 43.12 O
ATOM 13 C1' C A 626 35.022 134.196 78.194 1.00 39.31 C
ATOM 14 N1 C A 626 36.467 133.949 78.109 1.00 41.52 N
ATOM 15 C2 C A 626 37.192 134.575 77.099 1.00 43.35 C
ATOM 16 O2 C A 626 36.588 135.276 76.268 1.00 44.35 O
ATOM 17 N3 C A 626 38.530 134.400 77.045 1.00 44.28 N
ATOM 18 C4 C A 626 39.136 133.630 77.942 1.00 42.76 C
ATOM 19 N4 C A 626 40.455 133.504 77.861 1.00 45.40 N
ATOM 20 C5 C A 626 38.418 132.958 78.962 1.00 42.23 C
ATOM 21 C6 C A 626 37.099 133.139 79.008 1.00 41.86 C
ATOM 22 P A A 627 32.863 130.308 76.622 1.00 40.87 P
ATOM 23 OP1 A A 627 31.518 129.692 76.499 1.00 40.54 O
ATOM 24 OP2 A A 627 34.045 129.448 76.880 1.00 38.95 O
ATOM 25 O5' A A 627 33.159 131.135 75.297 1.00 38.07 O
TER
ATOM 1 O3' G B 624 40.979 130.987 85.960 1.00 37.04 O
ATOM 2 P C B 625 40.145 130.251 84.806 1.00 35.69 P
ATOM 3 OP1 C B 625 39.435 129.115 85.424 1.00 34.98 O
ATOM 4 OP2 C B 625 41.030 130.009 83.659 1.00 34.81 O
ATOM 5 O5' C B 625 39.073 131.345 84.382 1.00 37.36 O
ATOM 6 C5' C B 625 38.044 131.770 85.303 1.00 38.47 C
ATOM 7 C4' C B 625 37.163 132.808 84.654 1.00 38.08 C
ATOM 8 O4' C B 625 37.909 134.038 84.481 1.00 39.01 O
ATOM 9 C3' C B 625 36.710 132.455 83.251 1.00 38.68 C
ATOM 10 O3' C B 625 35.593 131.588 83.247 1.00 36.15 O
ATOM 11 C2' C B 625 36.430 133.817 82.639 1.00 38.55 C
ATOM 12 O2' C B 625 35.190 134.362 83.048 1.00 37.23 O
ATOM 13 C1' C B 625 37.568 134.640 83.241 1.00 38.18 C
ATOM 14 N1 C B 625 38.785 134.690 82.410 1.00 38.37 N
ATOM 15 C2 C B 625 38.864 135.619 81.366 1.00 38.16 C
ATOM 16 O2 C B 625 37.893 136.346 81.134 1.00 39.06 O
ATOM 17 N3 C B 625 39.997 135.700 80.641 1.00 36.64 N
ATOM 18 C4 C B 625 41.025 134.906 80.924 1.00 36.91 C
ATOM 19 N4 C B 625 42.134 135.043 80.209 1.00 38.38 N
ATOM 20 C5 C B 625 40.964 133.937 81.958 1.00 37.76 C
ATOM 21 C6 C B 625 39.836 133.858 82.665 1.00 37.78 C
ATOM 22 P C B 626 35.454 130.512 82.076 1.00 38.96 P
ATOM 23 OP1 C B 626 34.332 129.611 82.445 1.00 39.11 O
ATOM 24 OP2 C B 626 36.794 129.946 81.807 1.00 37.90 O
ATOM 25 O5' C B 626 35.052 131.379 80.804 1.00 38.02 O
TER
Atoms:
C2: (37.192,134.575,77.099)
OP1: (34.332,129.611,82.445)
OP2: (36.794,129.946,81.807)
C4: (39.136,133.630,77.942)
O5': (35.052,131.379,80.804)
C3': (33.883,132.140,78.179)
C1': (35.022,134.196,78.194)
O4': (34.596,133.924,79.514)
C5': (33.760,132.004,80.739)
P: (35.454,130.512,82.076)
O2: (36.588,135.276,76.268)
C4': (33.629,132.846,79.493)
C2': (34.209,133.306,77.260)
O2': (33.066,134.038,76.872)
N1: (36.467,133.949,78.109)
N3: (38.530,134.400,77.045)
N4: (40.455,133.504,77.861)
C6: (37.099,133.139,79.008)
C5: (38.418,132.958,78.962)
O3': (32.732,131.430,77.762)
OP1: (34.332,129.611,82.445)
OP2: (36.794,129.946,81.807)
C4: (39.136,133.630,77.942)
O5': (35.052,131.379,80.804)
C3': (33.883,132.140,78.179)
C1': (35.022,134.196,78.194)
O4': (34.596,133.924,79.514)
C5': (33.760,132.004,80.739)
P: (35.454,130.512,82.076)
O2: (36.588,135.276,76.268)
C4': (33.629,132.846,79.493)
C2': (34.209,133.306,77.260)
O2': (33.066,134.038,76.872)
N1: (36.467,133.949,78.109)
N3: (38.530,134.400,77.045)
N4: (40.455,133.504,77.861)
C6: (37.099,133.139,79.008)
C5: (38.418,132.958,78.962)
O3': (32.732,131.430,77.762)
C2: (38.864,135.619,81.366)
OP1: (39.435,129.115,85.424)
OP2: (41.030,130.009,83.659)
C4: (41.025,134.906,80.924)
O5': (39.073,131.345,84.382)
C3': (36.710,132.455,83.251)
C1': (37.568,134.640,83.241)
O4': (37.909,134.038,84.481)
C5': (38.044,131.770,85.303)
P: (40.145,130.251,84.806)
O2: (37.893,136.346,81.134)
C4': (37.163,132.808,84.654)
C2': (36.430,133.817,82.639)
O2': (35.190,134.362,83.048)
N1: (38.785,134.690,82.410)
N3: (39.997,135.700,80.641)
N4: (42.134,135.043,80.209)
C6: (39.836,133.858,82.665)
C5: (40.964,133.937,81.958)
O3': (35.593,131.588,83.247)
OP1: (39.435,129.115,85.424)
OP2: (41.030,130.009,83.659)
C4: (41.025,134.906,80.924)
O5': (39.073,131.345,84.382)
C3': (36.710,132.455,83.251)
C1': (37.568,134.640,83.241)
O4': (37.909,134.038,84.481)
C5': (38.044,131.770,85.303)
P: (40.145,130.251,84.806)
O2: (37.893,136.346,81.134)
C4': (37.163,132.808,84.654)
C2': (36.430,133.817,82.639)
O2': (35.190,134.362,83.048)
N1: (38.785,134.690,82.410)
N3: (39.997,135.700,80.641)
N4: (42.134,135.043,80.209)
C6: (39.836,133.858,82.665)
C5: (40.964,133.937,81.958)
O3': (35.593,131.588,83.247)
Image (generated by PyMOL):