ClaRNA

Doublet info:

Details

Nucleotide types: CC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3MUR:R19:R18

Extra

PDB:
ATOM 1 O3' C A 18 10.521 7.876 -5.630 1.00 37.36 O
ATOM 2 P C A 19 10.861 6.995 -6.918 1.00 37.89 P
ATOM 3 OP1 C A 19 11.386 7.907 -7.957 1.00 38.43 O
ATOM 4 OP2 C A 19 9.710 6.122 -7.231 1.00 38.86 O
ATOM 5 O5' C A 19 12.003 6.016 -6.388 1.00 38.03 O
ATOM 6 C5' C A 19 13.185 6.511 -5.790 1.00 40.28 C
ATOM 7 C4' C A 19 13.854 5.399 -5.001 1.00 41.68 C
ATOM 8 O4' C A 19 13.006 4.959 -3.911 1.00 41.73 O
ATOM 9 C3' C A 19 14.103 4.108 -5.758 1.00 39.96 C
ATOM 10 O3' C A 19 15.231 4.238 -6.601 1.00 39.30 O
ATOM 11 C2' C A 19 14.375 3.179 -4.587 1.00 41.73 C
ATOM 12 O2' C A 19 15.648 3.416 -4.025 1.00 45.29 O
ATOM 13 C1' C A 19 13.298 3.610 -3.599 1.00 41.19 C
ATOM 14 N1 C A 19 12.037 2.789 -3.641 1.00 41.82 N
ATOM 15 C2 C A 19 11.985 1.510 -3.049 1.00 42.32 C
ATOM 16 O2 C A 19 12.991 1.052 -2.490 1.00 42.24 O
ATOM 17 N3 C A 19 10.818 0.801 -3.109 1.00 41.90 N
ATOM 18 C4 C A 19 9.744 1.318 -3.718 1.00 41.81 C
ATOM 19 N4 C A 19 8.621 0.599 -3.756 1.00 41.60 N
ATOM 20 C5 C A 19 9.772 2.608 -4.325 1.00 43.28 C
ATOM 21 C6 C A 19 10.923 3.295 -4.260 1.00 43.54 C
ATOM 22 P A A 20 15.296 3.406 -7.961 1.00 39.25 P
ATOM 23 OP1 A A 20 16.504 3.824 -8.702 1.00 41.79 O
ATOM 24 OP2 A A 20 13.968 3.455 -8.615 1.00 35.83 O
ATOM 25 O5' A A 20 15.543 1.918 -7.437 1.00 42.75 O
TER

ATOM 1 O3' A B 17 4.553 8.313 -4.669 1.00 33.71 O
ATOM 2 P C B 18 5.391 7.571 -5.803 1.00 33.67 P
ATOM 3 OP1 C B 18 5.336 8.389 -7.037 1.00 37.00 O
ATOM 4 OP2 C B 18 4.974 6.155 -5.838 1.00 34.11 O
ATOM 5 O5' C B 18 6.874 7.598 -5.233 1.00 34.38 O
ATOM 6 C5' C B 18 7.547 8.819 -4.978 1.00 35.72 C
ATOM 7 C4' C B 18 8.753 8.509 -4.123 1.00 36.63 C
ATOM 8 O4' C B 18 8.310 8.023 -2.831 1.00 37.14 O
ATOM 9 C3' C B 18 9.618 7.385 -4.662 1.00 36.07 C
ATOM 10 O3' C B 18 10.521 7.876 -5.630 1.00 37.36 O
ATOM 11 C2' C B 18 10.312 6.901 -3.399 1.00 37.10 C
ATOM 12 O2' C B 18 11.429 7.688 -3.033 1.00 41.31 O
ATOM 13 C1' C B 18 9.186 7.016 -2.372 1.00 37.17 C
ATOM 14 N1 C B 18 8.466 5.720 -2.225 1.00 37.66 N
ATOM 15 C2 C B 18 9.055 4.708 -1.454 1.00 40.72 C
ATOM 16 O2 C B 18 10.141 4.923 -0.895 1.00 43.47 O
ATOM 17 N3 C B 18 8.411 3.518 -1.332 1.00 40.47 N
ATOM 18 C4 C B 18 7.242 3.326 -1.942 1.00 39.48 C
ATOM 19 N4 C B 18 6.648 2.143 -1.786 1.00 42.24 N
ATOM 20 C5 C B 18 6.628 4.337 -2.735 1.00 37.99 C
ATOM 21 C6 C B 18 7.270 5.503 -2.847 1.00 37.04 C
ATOM 22 P C B 19 10.861 6.995 -6.918 1.00 37.89 P
ATOM 23 OP1 C B 19 11.386 7.907 -7.957 1.00 38.43 O
ATOM 24 OP2 C B 19 9.710 6.122 -7.231 1.00 38.86 O
ATOM 25 O5' C B 19 12.003 6.016 -6.388 1.00 38.03 O
TER

Atoms:
C2: (11.985,1.510,-3.049)
OP1: (11.386,7.907,-7.957)
OP2: (9.710,6.122,-7.231)
C4: (9.744,1.318,-3.718)
O5': (12.003,6.016,-6.388)
C3': (14.103,4.108,-5.758)
C1': (13.298,3.610,-3.599)
O4': (13.006,4.959,-3.911)
C5': (13.185,6.511,-5.790)
P: (10.861,6.995,-6.918)
O2: (12.991,1.052,-2.490)
C4': (13.854,5.399,-5.001)
C2': (14.375,3.179,-4.587)
O2': (15.648,3.416,-4.025)
N1: (12.037,2.789,-3.641)
N3: (10.818,0.801,-3.109)
N4: (8.621,0.599,-3.756)
C6: (10.923,3.295,-4.260)
C5: (9.772,2.608,-4.325)
O3': (15.231,4.238,-6.601)
C2: (9.055,4.708,-1.454)
OP1: (5.336,8.389,-7.037)
OP2: (4.974,6.155,-5.838)
C4: (7.242,3.326,-1.942)
O5': (6.874,7.598,-5.233)
C3': (9.618,7.385,-4.662)
C1': (9.186,7.016,-2.372)
O4': (8.310,8.023,-2.831)
C5': (7.547,8.819,-4.978)
P: (5.391,7.571,-5.803)
O2: (10.141,4.923,-0.895)
C4': (8.753,8.509,-4.123)
C2': (10.312,6.901,-3.399)
O2': (11.429,7.688,-3.033)
N1: (8.466,5.720,-2.225)
N3: (8.411,3.518,-1.332)
N4: (6.648,2.143,-1.786)
C6: (7.270,5.503,-2.847)
C5: (6.628,4.337,-2.735)
O3': (10.521,7.876,-5.630)
Image (generated by PyMOL):
PyMOL image
show in jmol