ClaRNA

Doublet info:

Details

Nucleotide types: CC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3KNI:A1414:A1408

Extra

PDB:
ATOM 1 O3' A A1413 -1.346 -50.435 31.668 1.00 63.79 O
ATOM 2 P C A1414 -2.715 -51.076 31.172 1.00 62.01 P
ATOM 3 OP1 C A1414 -3.728 -50.044 31.485 1.00 69.89 O
ATOM 4 OP2 C A1414 -2.848 -52.450 31.744 1.00 53.90 O
ATOM 5 O5' C A1414 -2.516 -51.232 29.596 1.00 69.77 O
ATOM 6 C5' C A1414 -2.908 -50.209 28.682 1.00 80.22 C
ATOM 7 C4' C A1414 -4.054 -50.691 27.819 1.00 84.01 C
ATOM 8 O4' C A1414 -3.662 -51.885 27.095 1.00 83.46 O
ATOM 9 C3' C A1414 -5.306 -51.121 28.578 1.00 83.02 C
ATOM 10 O3' C A1414 -6.121 -50.003 28.973 1.00 82.15 O
ATOM 11 C2' C A1414 -5.979 -52.164 27.676 1.00 80.72 C
ATOM 12 O2' C A1414 -6.993 -51.707 26.814 1.00 81.11 O
ATOM 13 C1' C A1414 -4.810 -52.674 26.834 1.00 83.06 C
ATOM 14 N1 C A1414 -4.488 -54.109 26.970 1.00 81.95 N
ATOM 15 C2 C A1414 -5.010 -55.008 26.015 1.00 86.23 C
ATOM 16 O2 C A1414 -5.798 -54.582 25.150 1.00 94.01 O
ATOM 17 N3 C A1414 -4.654 -56.315 26.071 1.00 77.70 N
ATOM 18 C4 C A1414 -3.837 -56.742 27.037 1.00 76.84 C
ATOM 19 N4 C A1414 -3.478 -58.026 27.029 1.00 76.40 N
ATOM 20 C5 C A1414 -3.342 -55.866 28.050 1.00 80.84 C
ATOM 21 C6 C A1414 -3.686 -54.569 27.977 1.00 81.86 C
ATOM 22 P G A1415 -6.516 -48.846 27.915 1.00 97.51 P
ATOM 23 OP1 G A1415 -7.556 -48.001 28.559 1.00102.00 O
ATOM 24 OP2 G A1415 -6.776 -49.419 26.570 1.00 90.54 O
ATOM 25 O5' G A1415 -5.182 -47.981 27.787 1.00 97.99 O
TER

ATOM 1 O3' C B1407 0.417 -61.926 21.018 1.00 74.99 O
ATOM 2 P C B1408 -0.039 -62.212 22.526 1.00 75.53 P
ATOM 3 OP1 C B1408 0.105 -63.670 22.798 1.00 83.24 O
ATOM 4 OP2 C B1408 -1.356 -61.552 22.736 1.00 61.92 O
ATOM 5 O5' C B1408 1.098 -61.452 23.342 1.00 76.43 O
ATOM 6 C5' C B1408 0.936 -61.095 24.708 1.00 77.00 C
ATOM 7 C4' C B1408 1.651 -59.797 24.963 1.00 71.66 C
ATOM 8 O4' C B1408 1.191 -58.837 23.984 1.00 78.54 O
ATOM 9 C3' C B1408 1.435 -59.146 26.319 1.00 74.52 C
ATOM 10 O3' C B1408 2.432 -59.631 27.222 1.00 77.55 O
ATOM 11 C2' C B1408 1.624 -57.656 26.010 1.00 72.92 C
ATOM 12 O2' C B1408 2.981 -57.248 25.961 1.00 68.22 O
ATOM 13 C1' C B1408 1.128 -57.555 24.568 1.00 71.64 C
ATOM 14 N1 C B1408 -0.202 -56.980 24.291 1.00 71.27 N
ATOM 15 C2 C B1408 -0.650 -55.845 24.993 1.00 70.44 C
ATOM 16 O2 C B1408 -0.002 -55.422 25.954 1.00 64.68 O
ATOM 17 N3 C B1408 -1.793 -55.250 24.604 1.00 78.00 N
ATOM 18 C4 C B1408 -2.497 -55.756 23.588 1.00 78.61 C
ATOM 19 N4 C B1408 -3.588 -55.097 23.185 1.00 78.98 N
ATOM 20 C5 C B1408 -2.109 -56.949 22.920 1.00 75.70 C
ATOM 21 C6 C B1408 -0.971 -57.522 23.300 1.00 74.50 C
ATOM 22 P A B1409 2.039 -60.082 28.718 1.00 82.36 P
ATOM 23 OP1 A B1409 0.630 -60.589 28.734 1.00 65.42 O
ATOM 24 OP2 A B1409 2.443 -58.988 29.662 1.00 66.75 O
ATOM 25 O5' A B1409 3.039 -61.298 28.965 1.00 76.19 O
TER

Atoms:
C2: (-5.010,-55.008,26.015)
OP1: (-3.728,-50.044,31.485)
OP2: (-2.848,-52.450,31.744)
C4: (-3.837,-56.742,27.037)
O5': (-2.516,-51.232,29.596)
C3': (-5.306,-51.121,28.578)
C1': (-4.810,-52.674,26.834)
O4': (-3.662,-51.885,27.095)
C5': (-2.908,-50.209,28.682)
P: (-2.715,-51.076,31.172)
O2: (-5.798,-54.582,25.150)
C4': (-4.054,-50.691,27.819)
C2': (-5.979,-52.164,27.676)
O2': (-6.993,-51.707,26.814)
N1: (-4.488,-54.109,26.970)
N3: (-4.654,-56.315,26.071)
N4: (-3.478,-58.026,27.029)
C6: (-3.686,-54.569,27.977)
C5: (-3.342,-55.866,28.050)
O3': (-6.121,-50.003,28.973)
C2: (-0.650,-55.845,24.993)
OP1: (0.105,-63.670,22.798)
OP2: (-1.356,-61.552,22.736)
C4: (-2.497,-55.756,23.588)
O5': (1.098,-61.452,23.342)
C3': (1.435,-59.146,26.319)
C1': (1.128,-57.555,24.568)
O4': (1.191,-58.837,23.984)
C5': (0.936,-61.095,24.708)
P: (-0.039,-62.212,22.526)
O2: (-0.002,-55.422,25.954)
C4': (1.651,-59.797,24.963)
C2': (1.624,-57.656,26.010)
O2': (2.981,-57.248,25.961)
N1: (-0.202,-56.980,24.291)
N3: (-1.793,-55.250,24.604)
N4: (-3.588,-55.097,23.185)
C6: (-0.971,-57.522,23.300)
C5: (-2.109,-56.949,22.920)
O3': (2.432,-59.631,27.222)
Image (generated by PyMOL):
PyMOL image
show in jmol