ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OH5:A1909:A1608

Extra

PDB:
ATOM 1 O3' G A1908 58.775 -48.011 21.443 1.00 37.55 O
ATOM 2 P U A1909 59.783 -48.835 20.486 1.00 41.31 P
ATOM 3 OP1 U A1909 59.104 -48.959 19.173 1.00 43.04 O
ATOM 4 OP2 U A1909 60.175 -50.074 21.212 1.00 55.54 O
ATOM 5 O5' U A1909 61.046 -47.901 20.300 1.00 34.19 O
ATOM 6 C5' U A1909 61.850 -48.069 19.137 1.00 33.16 C
ATOM 7 C4' U A1909 63.241 -47.517 19.299 1.00 32.65 C
ATOM 8 O4' U A1909 63.180 -46.131 19.722 1.00 41.71 O
ATOM 9 C3' U A1909 64.132 -48.169 20.338 1.00 31.30 C
ATOM 10 O3' U A1909 64.681 -49.420 19.911 1.00 34.62 O
ATOM 11 C2' U A1909 65.180 -47.073 20.570 1.00 33.27 C
ATOM 12 O2' U A1909 66.110 -47.020 19.499 1.00 32.81 O
ATOM 13 C1' U A1909 64.316 -45.819 20.500 1.00 35.63 C
ATOM 14 N1 U A1909 63.871 -45.396 21.819 1.00 35.10 N
ATOM 15 C2 U A1909 64.874 -44.952 22.615 1.00 36.88 C
ATOM 16 O2 U A1909 66.027 -44.915 22.208 1.00 36.71 O
ATOM 17 N3 U A1909 64.468 -44.578 23.868 1.00 37.30 N
ATOM 18 C4 U A1909 63.190 -44.604 24.358 1.00 36.52 C
ATOM 19 O4 U A1909 62.990 -44.216 25.504 1.00 41.26 O
ATOM 20 C5 U A1909 62.211 -45.091 23.445 1.00 35.04 C
ATOM 21 C6 U A1909 62.576 -45.464 22.228 1.00 34.60 C
ATOM 22 P C A1910 64.865 -50.641 20.970 1.00 41.42 P
ATOM 23 OP1 C A1910 65.511 -51.763 20.264 1.00 29.02 O
ATOM 24 OP2 C A1910 63.538 -50.881 21.598 1.00 46.91 O
ATOM 25 O5' C A1910 65.866 -50.035 22.050 1.00 28.01 O
TER

ATOM 1 O3' G B1607 64.467 -40.768 34.872 1.00 23.69 O
ATOM 2 P G B1608 63.756 -39.500 34.189 1.00 44.53 P
ATOM 3 OP1 G B1608 64.594 -38.308 34.467 1.00 30.29 O
ATOM 4 OP2 G B1608 62.340 -39.498 34.638 1.00 47.73 O
ATOM 5 O5' G B1608 63.829 -39.858 32.644 1.00 39.70 O
ATOM 6 C5' G B1608 65.078 -40.044 32.005 1.00 36.25 C
ATOM 7 C4' G B1608 64.912 -40.190 30.525 1.00 31.65 C
ATOM 8 O4' G B1608 64.052 -41.319 30.261 1.00 36.80 O
ATOM 9 C3' G B1608 64.259 -39.017 29.844 1.00 35.52 C
ATOM 10 O3' G B1608 64.717 -38.967 28.508 1.00 33.23 O
ATOM 11 C2' G B1608 62.791 -39.406 29.866 1.00 40.59 C
ATOM 12 O2' G B1608 61.997 -38.755 28.908 1.00 44.92 O
ATOM 13 C1' G B1608 62.883 -40.889 29.597 1.00 37.97 C
ATOM 14 N9 G B1608 61.766 -41.661 30.128 1.00 41.55 N
ATOM 15 C8 G B1608 61.210 -41.564 31.376 1.00 41.72 C
ATOM 16 N7 G B1608 60.246 -42.419 31.562 1.00 39.90 N
ATOM 17 C5 G B1608 60.173 -43.117 30.369 1.00 45.30 C
ATOM 18 C6 G B1608 59.320 -44.167 29.962 1.00 49.49 C
ATOM 19 O6 G B1608 58.426 -44.720 30.594 1.00 56.31 O
ATOM 20 N1 G B1608 59.592 -44.599 28.677 1.00 47.42 N
ATOM 21 C2 G B1608 60.561 -44.076 27.873 1.00 48.85 C
ATOM 22 N2 G B1608 60.660 -44.630 26.667 1.00 42.33 N
ATOM 23 N3 G B1608 61.363 -43.086 28.228 1.00 50.85 N
ATOM 24 C4 G B1608 61.112 -42.666 29.480 1.00 44.15 C
ATOM 25 P A B1609 66.065 -38.176 28.167 1.00 40.46 P
ATOM 26 OP1 A B1609 66.964 -38.334 29.324 1.00 30.72 O
ATOM 27 OP2 A B1609 65.661 -36.798 27.757 1.00 38.37 O
ATOM 28 O5' A B1609 66.642 -38.974 26.912 1.00 29.08 O
TER

Atoms:
C4: (63.190,-44.604,24.358)
N3: (64.468,-44.578,23.868)
OP1: (59.104,-48.959,19.173)
OP2: (60.175,-50.074,21.212)
C2: (64.874,-44.952,22.615)
C1': (64.316,-45.819,20.500)
C3': (64.132,-48.169,20.338)
O5': (61.046,-47.901,20.300)
O4': (63.180,-46.131,19.722)
C5': (61.850,-48.069,19.137)
P: (59.783,-48.835,20.486)
C4': (63.241,-47.517,19.299)
C2': (65.180,-47.073,20.570)
O2': (66.110,-47.020,19.499)
N1: (63.871,-45.396,21.819)
O4: (62.990,-44.216,25.504)
O2: (66.027,-44.915,22.208)
C6: (62.576,-45.464,22.228)
C5: (62.211,-45.091,23.445)
O3': (64.681,-49.420,19.911)
OP1: (64.594,-38.308,34.467)
OP2: (62.340,-39.498,34.638)
C3': (64.259,-39.017,29.844)
C1': (62.883,-40.889,29.597)
C5': (65.078,-40.044,32.005)
O6: (58.426,-44.720,30.594)
O4': (64.052,-41.319,30.261)
C8: (61.210,-41.564,31.376)
C2: (60.561,-44.076,27.873)
C6: (59.320,-44.167,29.962)
C5: (60.173,-43.117,30.369)
C4: (61.112,-42.666,29.480)
P: (63.756,-39.500,34.189)
C4': (64.912,-40.190,30.525)
C2': (62.791,-39.406,29.866)
O2': (61.997,-38.755,28.908)
N1: (59.592,-44.599,28.677)
N2: (60.660,-44.630,26.667)
N3: (61.363,-43.086,28.228)
N7: (60.246,-42.419,31.562)
N9: (61.766,-41.661,30.128)
O5': (63.829,-39.858,32.644)
O3': (64.717,-38.967,28.508)
Image (generated by PyMOL):
PyMOL image
show in jmol