Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1NUJ:A5:A4
Extra
PDB:
ATOM 1 O3' C A 4 2.386 37.784 24.117 1.00 41.73 O
ATOM 2 P C A 5 2.791 36.776 25.312 1.00 40.12 P
ATOM 3 OP1 C A 5 2.315 35.424 24.927 1.00 45.27 O
ATOM 4 OP2 C A 5 2.428 37.331 26.637 1.00 35.47 O
ATOM 5 O5' C A 5 4.375 36.752 25.278 1.00 39.48 O
ATOM 6 C5' C A 5 5.071 36.424 24.092 1.00 38.22 C
ATOM 7 C4' C A 5 6.539 36.662 24.299 1.00 40.54 C
ATOM 8 O4' C A 5 6.811 38.089 24.356 1.00 38.49 O
ATOM 9 C3' C A 5 7.059 36.135 25.623 1.00 39.54 C
ATOM 10 O3' C A 5 7.358 34.757 25.485 1.00 45.04 O
ATOM 11 C2' C A 5 8.316 36.970 25.815 1.00 37.65 C
ATOM 12 O2' C A 5 9.376 36.495 25.011 1.00 39.68 O
ATOM 13 C1' C A 5 7.862 38.327 25.268 1.00 36.53 C
ATOM 14 N1 C A 5 7.391 39.268 26.301 1.00 36.23 N
ATOM 15 C2 C A 5 8.337 40.057 26.959 1.00 34.91 C
ATOM 16 O2 C A 5 9.538 39.933 26.660 1.00 34.40 O
ATOM 17 N3 C A 5 7.928 40.932 27.900 1.00 35.18 N
ATOM 18 C4 C A 5 6.634 41.040 28.197 1.00 35.75 C
ATOM 19 N4 C A 5 6.282 41.927 29.132 1.00 36.75 N
ATOM 20 C5 C A 5 5.644 40.247 27.549 1.00 37.06 C
ATOM 21 C6 C A 5 6.061 39.379 26.615 1.00 36.70 C
ATOM 22 P G A 6 6.967 33.724 26.653 1.00 44.19 P
ATOM 23 OP1 G A 6 5.737 33.005 26.237 1.00 46.83 O
ATOM 24 OP2 G A 6 7.007 34.401 27.982 1.00 39.74 O
ATOM 25 O5' G A 6 8.173 32.688 26.592 1.00 43.03 O
TER
ATOM 1 O3' A B 3 -1.005 42.855 25.482 1.00 40.14 O
ATOM 2 P C B 4 -0.300 41.791 26.476 1.00 41.61 P
ATOM 3 OP1 C B 4 -1.370 40.848 26.881 1.00 46.45 O
ATOM 4 OP2 C B 4 0.448 42.534 27.511 1.00 41.62 O
ATOM 5 O5' C B 4 0.787 41.023 25.604 1.00 38.47 O
ATOM 6 C5' C B 4 0.431 40.377 24.394 1.00 39.43 C
ATOM 7 C4' C B 4 1.667 40.064 23.577 1.00 41.30 C
ATOM 8 O4' C B 4 2.396 41.294 23.323 1.00 41.22 O
ATOM 9 C3' C B 4 2.728 39.167 24.209 1.00 40.06 C
ATOM 10 O3' C B 4 2.386 37.784 24.117 1.00 41.73 O
ATOM 11 C2' C B 4 3.948 39.488 23.351 1.00 38.24 C
ATOM 12 O2' C B 4 3.969 38.837 22.095 1.00 35.14 O
ATOM 13 C1' C B 4 3.772 40.994 23.139 1.00 35.89 C
ATOM 14 N1 C B 4 4.590 41.785 24.082 1.00 32.83 N
ATOM 15 C2 C B 4 5.967 41.845 23.859 1.00 30.63 C
ATOM 16 O2 C B 4 6.443 41.227 22.893 1.00 30.89 O
ATOM 17 N3 C B 4 6.749 42.563 24.697 1.00 31.70 N
ATOM 18 C4 C B 4 6.205 43.201 25.730 1.00 32.52 C
ATOM 19 N4 C B 4 7.020 43.895 26.530 1.00 32.72 N
ATOM 20 C5 C B 4 4.802 43.157 25.991 1.00 32.44 C
ATOM 21 C6 C B 4 4.036 42.443 25.145 1.00 33.15 C
ATOM 22 P C B 5 2.791 36.776 25.312 1.00 40.12 P
ATOM 23 OP1 C B 5 2.315 35.424 24.927 1.00 45.27 O
ATOM 24 OP2 C B 5 2.428 37.331 26.637 1.00 35.47 O
ATOM 25 O5' C B 5 4.375 36.752 25.278 1.00 39.48 O
TER
ATOM 2 P C A 5 2.791 36.776 25.312 1.00 40.12 P
ATOM 3 OP1 C A 5 2.315 35.424 24.927 1.00 45.27 O
ATOM 4 OP2 C A 5 2.428 37.331 26.637 1.00 35.47 O
ATOM 5 O5' C A 5 4.375 36.752 25.278 1.00 39.48 O
ATOM 6 C5' C A 5 5.071 36.424 24.092 1.00 38.22 C
ATOM 7 C4' C A 5 6.539 36.662 24.299 1.00 40.54 C
ATOM 8 O4' C A 5 6.811 38.089 24.356 1.00 38.49 O
ATOM 9 C3' C A 5 7.059 36.135 25.623 1.00 39.54 C
ATOM 10 O3' C A 5 7.358 34.757 25.485 1.00 45.04 O
ATOM 11 C2' C A 5 8.316 36.970 25.815 1.00 37.65 C
ATOM 12 O2' C A 5 9.376 36.495 25.011 1.00 39.68 O
ATOM 13 C1' C A 5 7.862 38.327 25.268 1.00 36.53 C
ATOM 14 N1 C A 5 7.391 39.268 26.301 1.00 36.23 N
ATOM 15 C2 C A 5 8.337 40.057 26.959 1.00 34.91 C
ATOM 16 O2 C A 5 9.538 39.933 26.660 1.00 34.40 O
ATOM 17 N3 C A 5 7.928 40.932 27.900 1.00 35.18 N
ATOM 18 C4 C A 5 6.634 41.040 28.197 1.00 35.75 C
ATOM 19 N4 C A 5 6.282 41.927 29.132 1.00 36.75 N
ATOM 20 C5 C A 5 5.644 40.247 27.549 1.00 37.06 C
ATOM 21 C6 C A 5 6.061 39.379 26.615 1.00 36.70 C
ATOM 22 P G A 6 6.967 33.724 26.653 1.00 44.19 P
ATOM 23 OP1 G A 6 5.737 33.005 26.237 1.00 46.83 O
ATOM 24 OP2 G A 6 7.007 34.401 27.982 1.00 39.74 O
ATOM 25 O5' G A 6 8.173 32.688 26.592 1.00 43.03 O
TER
ATOM 1 O3' A B 3 -1.005 42.855 25.482 1.00 40.14 O
ATOM 2 P C B 4 -0.300 41.791 26.476 1.00 41.61 P
ATOM 3 OP1 C B 4 -1.370 40.848 26.881 1.00 46.45 O
ATOM 4 OP2 C B 4 0.448 42.534 27.511 1.00 41.62 O
ATOM 5 O5' C B 4 0.787 41.023 25.604 1.00 38.47 O
ATOM 6 C5' C B 4 0.431 40.377 24.394 1.00 39.43 C
ATOM 7 C4' C B 4 1.667 40.064 23.577 1.00 41.30 C
ATOM 8 O4' C B 4 2.396 41.294 23.323 1.00 41.22 O
ATOM 9 C3' C B 4 2.728 39.167 24.209 1.00 40.06 C
ATOM 10 O3' C B 4 2.386 37.784 24.117 1.00 41.73 O
ATOM 11 C2' C B 4 3.948 39.488 23.351 1.00 38.24 C
ATOM 12 O2' C B 4 3.969 38.837 22.095 1.00 35.14 O
ATOM 13 C1' C B 4 3.772 40.994 23.139 1.00 35.89 C
ATOM 14 N1 C B 4 4.590 41.785 24.082 1.00 32.83 N
ATOM 15 C2 C B 4 5.967 41.845 23.859 1.00 30.63 C
ATOM 16 O2 C B 4 6.443 41.227 22.893 1.00 30.89 O
ATOM 17 N3 C B 4 6.749 42.563 24.697 1.00 31.70 N
ATOM 18 C4 C B 4 6.205 43.201 25.730 1.00 32.52 C
ATOM 19 N4 C B 4 7.020 43.895 26.530 1.00 32.72 N
ATOM 20 C5 C B 4 4.802 43.157 25.991 1.00 32.44 C
ATOM 21 C6 C B 4 4.036 42.443 25.145 1.00 33.15 C
ATOM 22 P C B 5 2.791 36.776 25.312 1.00 40.12 P
ATOM 23 OP1 C B 5 2.315 35.424 24.927 1.00 45.27 O
ATOM 24 OP2 C B 5 2.428 37.331 26.637 1.00 35.47 O
ATOM 25 O5' C B 5 4.375 36.752 25.278 1.00 39.48 O
TER
Atoms:
C2: (8.337,40.057,26.959)
OP1: (2.315,35.424,24.927)
OP2: (2.428,37.331,26.637)
C4: (6.634,41.040,28.197)
O5': (4.375,36.752,25.278)
C3': (7.059,36.135,25.623)
C1': (7.862,38.327,25.268)
O4': (6.811,38.089,24.356)
C5': (5.071,36.424,24.092)
P: (2.791,36.776,25.312)
O2: (9.538,39.933,26.660)
C4': (6.539,36.662,24.299)
C2': (8.316,36.970,25.815)
O2': (9.376,36.495,25.011)
N1: (7.391,39.268,26.301)
N3: (7.928,40.932,27.900)
N4: (6.282,41.927,29.132)
C6: (6.061,39.379,26.615)
C5: (5.644,40.247,27.549)
O3': (7.358,34.757,25.485)
OP1: (2.315,35.424,24.927)
OP2: (2.428,37.331,26.637)
C4: (6.634,41.040,28.197)
O5': (4.375,36.752,25.278)
C3': (7.059,36.135,25.623)
C1': (7.862,38.327,25.268)
O4': (6.811,38.089,24.356)
C5': (5.071,36.424,24.092)
P: (2.791,36.776,25.312)
O2: (9.538,39.933,26.660)
C4': (6.539,36.662,24.299)
C2': (8.316,36.970,25.815)
O2': (9.376,36.495,25.011)
N1: (7.391,39.268,26.301)
N3: (7.928,40.932,27.900)
N4: (6.282,41.927,29.132)
C6: (6.061,39.379,26.615)
C5: (5.644,40.247,27.549)
O3': (7.358,34.757,25.485)
C2: (5.967,41.845,23.859)
OP1: (-1.370,40.848,26.881)
OP2: (0.448,42.534,27.511)
C4: (6.205,43.201,25.730)
O5': (0.787,41.023,25.604)
C3': (2.728,39.167,24.209)
C1': (3.772,40.994,23.139)
O4': (2.396,41.294,23.323)
C5': (0.431,40.377,24.394)
P: (-0.300,41.791,26.476)
O2: (6.443,41.227,22.893)
C4': (1.667,40.064,23.577)
C2': (3.948,39.488,23.351)
O2': (3.969,38.837,22.095)
N1: (4.590,41.785,24.082)
N3: (6.749,42.563,24.697)
N4: (7.020,43.895,26.530)
C6: (4.036,42.443,25.145)
C5: (4.802,43.157,25.991)
O3': (2.386,37.784,24.117)
OP1: (-1.370,40.848,26.881)
OP2: (0.448,42.534,27.511)
C4: (6.205,43.201,25.730)
O5': (0.787,41.023,25.604)
C3': (2.728,39.167,24.209)
C1': (3.772,40.994,23.139)
O4': (2.396,41.294,23.323)
C5': (0.431,40.377,24.394)
P: (-0.300,41.791,26.476)
O2: (6.443,41.227,22.893)
C4': (1.667,40.064,23.577)
C2': (3.948,39.488,23.351)
O2': (3.969,38.837,22.095)
N1: (4.590,41.785,24.082)
N3: (6.749,42.563,24.697)
N4: (7.020,43.895,26.530)
C6: (4.036,42.443,25.145)
C5: (4.802,43.157,25.991)
O3': (2.386,37.784,24.117)
Image (generated by PyMOL):