ClaRNA

Doublet info:

Details

Nucleotide types: CC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3KNI:A2605:A2604

Extra

PDB:
ATOM 1 O3' C A2604 17.043 -50.184 13.433 1.00 55.18 O
ATOM 2 P C A2605 15.731 -50.649 14.247 1.00 62.27 P
ATOM 3 OP1 C A2605 14.626 -50.843 13.261 1.00 45.45 O
ATOM 4 OP2 C A2605 15.575 -49.663 15.358 1.00 56.81 O
ATOM 5 O5' C A2605 16.153 -52.050 14.894 1.00 45.40 O
ATOM 6 C5' C A2605 16.460 -53.177 14.065 1.00 45.65 C
ATOM 7 C4' C A2605 16.675 -54.426 14.900 1.00 45.76 C
ATOM 8 O4' C A2605 17.861 -54.288 15.730 1.00 45.68 O
ATOM 9 C3' C A2605 15.571 -54.751 15.887 1.00 51.34 C
ATOM 10 O3' C A2605 14.495 -55.457 15.303 1.00 63.78 O
ATOM 11 C2' C A2605 16.278 -55.590 16.939 1.00 44.81 C
ATOM 12 O2' C A2605 16.394 -56.935 16.551 1.00 45.56 O
ATOM 13 C1' C A2605 17.653 -54.936 16.975 1.00 39.33 C
ATOM 14 N1 C A2605 17.698 -53.929 18.046 1.00 34.25 N
ATOM 15 C2 C A2605 18.007 -54.341 19.357 1.00 38.93 C
ATOM 16 O2 C A2605 18.243 -55.539 19.571 1.00 44.48 O
ATOM 17 N3 C A2605 18.034 -53.420 20.356 1.00 35.81 N
ATOM 18 C4 C A2605 17.766 -52.140 20.089 1.00 33.34 C
ATOM 19 N4 C A2605 17.812 -51.272 21.089 1.00 32.99 N
ATOM 20 C5 C A2605 17.444 -51.696 18.770 1.00 35.74 C
ATOM 21 C6 C A2605 17.427 -52.612 17.787 1.00 35.32 C
ATOM 22 P C A2606 13.069 -55.440 16.035 1.00 64.61 P
ATOM 23 OP1 C A2606 12.131 -56.266 15.216 1.00 67.65 O
ATOM 24 OP2 C A2606 12.734 -54.018 16.368 1.00 56.02 O
ATOM 25 O5' C A2606 13.352 -56.173 17.417 1.00 52.40 O
TER

ATOM 1 O3' U B2603 21.145 -45.487 14.524 1.00 40.91 O
ATOM 2 P C B2604 19.560 -45.363 14.487 1.00 36.65 P
ATOM 3 OP1 C B2604 19.266 -44.710 13.191 1.00 43.24 O
ATOM 4 OP2 C B2604 19.163 -44.703 15.746 1.00 32.08 O
ATOM 5 O5' C B2604 19.079 -46.888 14.422 1.00 41.73 O
ATOM 6 C5' C B2604 19.101 -47.595 13.172 1.00 43.44 C
ATOM 7 C4' C B2604 19.275 -49.096 13.361 1.00 39.46 C
ATOM 8 O4' C B2604 20.507 -49.378 14.077 1.00 38.74 O
ATOM 9 C3' C B2604 18.236 -49.882 14.149 1.00 44.05 C
ATOM 10 O3' C B2604 17.043 -50.184 13.433 1.00 55.18 O
ATOM 11 C2' C B2604 18.995 -51.157 14.515 1.00 41.45 C
ATOM 12 O2' C B2604 19.086 -52.157 13.524 1.00 49.84 O
ATOM 13 C1' C B2604 20.391 -50.626 14.749 1.00 34.89 C
ATOM 14 N1 C B2604 20.524 -50.447 16.191 1.00 27.69 N
ATOM 15 C2 C B2604 20.884 -51.546 16.966 1.00 28.99 C
ATOM 16 O2 C B2604 21.088 -52.637 16.415 1.00 30.90 O
ATOM 17 N3 C B2604 20.996 -51.398 18.298 1.00 31.14 N
ATOM 18 C4 C B2604 20.760 -50.209 18.861 1.00 36.22 C
ATOM 19 N4 C B2604 20.884 -50.100 20.183 1.00 42.41 N
ATOM 20 C5 C B2604 20.387 -49.080 18.093 1.00 34.75 C
ATOM 21 C6 C B2604 20.282 -49.242 16.774 1.00 33.19 C
ATOM 22 P C B2605 15.731 -50.649 14.247 1.00 62.27 P
ATOM 23 OP1 C B2605 14.626 -50.843 13.261 1.00 45.45 O
ATOM 24 OP2 C B2605 15.575 -49.663 15.358 1.00 56.81 O
ATOM 25 O5' C B2605 16.153 -52.050 14.894 1.00 45.40 O
TER

Atoms:
C2: (18.007,-54.341,19.357)
OP1: (14.626,-50.843,13.261)
OP2: (15.575,-49.663,15.358)
C4: (17.766,-52.140,20.089)
O5': (16.153,-52.050,14.894)
C3': (15.571,-54.751,15.887)
C1': (17.653,-54.936,16.975)
O4': (17.861,-54.288,15.730)
C5': (16.460,-53.177,14.065)
P: (15.731,-50.649,14.247)
O2: (18.243,-55.539,19.571)
C4': (16.675,-54.426,14.900)
C2': (16.278,-55.590,16.939)
O2': (16.394,-56.935,16.551)
N1: (17.698,-53.929,18.046)
N3: (18.034,-53.420,20.356)
N4: (17.812,-51.272,21.089)
C6: (17.427,-52.612,17.787)
C5: (17.444,-51.696,18.770)
O3': (14.495,-55.457,15.303)
C2: (20.884,-51.546,16.966)
OP1: (19.266,-44.710,13.191)
OP2: (19.163,-44.703,15.746)
C4: (20.760,-50.209,18.861)
O5': (19.079,-46.888,14.422)
C3': (18.236,-49.882,14.149)
C1': (20.391,-50.626,14.749)
O4': (20.507,-49.378,14.077)
C5': (19.101,-47.595,13.172)
P: (19.560,-45.363,14.487)
O2: (21.088,-52.637,16.415)
C4': (19.275,-49.096,13.361)
C2': (18.995,-51.157,14.515)
O2': (19.086,-52.157,13.524)
N1: (20.524,-50.447,16.191)
N3: (20.996,-51.398,18.298)
N4: (20.884,-50.100,20.183)
C6: (20.282,-49.242,16.774)
C5: (20.387,-49.080,18.093)
O3': (17.043,-50.184,13.433)
Image (generated by PyMOL):
PyMOL image
show in jmol