Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1390:A1389
Extra
PDB:
ATOM 1 O3' U A1389 -2.301 -43.777 24.364 1.00 12.13 O
ATOM 2 P U A1390 -1.454 -45.073 24.725 1.00 0.01 P
ATOM 3 OP1 U A1390 -0.148 -44.626 25.181 1.00 0.01 O
ATOM 4 OP2 U A1390 -1.527 -45.951 23.566 1.00 0.01 O
ATOM 5 O5' U A1390 -2.248 -45.700 25.951 1.00 0.01 O
ATOM 6 C5' U A1390 -2.082 -45.164 27.262 1.00 0.01 C
ATOM 7 C4' U A1390 -2.343 -46.180 28.367 1.00 0.01 C
ATOM 8 O4' U A1390 -3.766 -46.407 28.487 1.00 0.01 O
ATOM 9 C3' U A1390 -1.710 -47.555 28.190 1.00 0.01 C
ATOM 10 O3' U A1390 -1.257 -48.035 29.459 1.00 0.01 O
ATOM 11 C2' U A1390 -2.874 -48.396 27.681 1.00 0.01 C
ATOM 12 O2' U A1390 -2.784 -49.771 27.939 1.00 0.01 O
ATOM 13 C1' U A1390 -4.043 -47.774 28.406 1.00 0.01 C
ATOM 14 N1 U A1390 -5.273 -47.905 27.694 1.00 0.06 N
ATOM 15 C2 U A1390 -6.288 -48.547 28.287 1.00 0.06 C
ATOM 16 O2 U A1390 -6.191 -48.994 29.399 1.00 0.06 O
ATOM 17 N3 U A1390 -7.407 -48.640 27.533 1.00 0.06 N
ATOM 18 C4 U A1390 -7.596 -48.141 26.274 1.00 0.06 C
ATOM 19 O4 U A1390 -8.676 -48.307 25.728 1.00 0.06 O
ATOM 20 C5 U A1390 -6.479 -47.481 25.711 1.00 0.06 C
ATOM 21 C6 U A1390 -5.374 -47.392 26.444 1.00 0.06 C
ATOM 22 P C A1391 0.300 -47.886 29.864 1.00 0.01 P
ATOM 23 OP1 C A1391 0.411 -48.055 31.326 1.00 0.01 O
ATOM 24 OP2 C A1391 0.778 -46.629 29.279 1.00 0.01 O
ATOM 25 O5' C A1391 0.968 -49.128 29.136 1.00 0.01 O
TER
ATOM 1 O3' A B1388 -5.679 -46.931 22.403 1.00 0.01 O
ATOM 2 P U B1389 -6.266 -45.943 21.287 1.00 12.13 P
ATOM 3 OP1 U B1389 -7.639 -45.605 21.697 1.00 12.13 O
ATOM 4 OP2 U B1389 -6.045 -46.582 19.965 1.00 12.13 O
ATOM 5 O5' U B1389 -5.350 -44.667 21.433 1.00 12.13 O
ATOM 6 C5' U B1389 -3.951 -44.753 21.240 1.00 12.13 C
ATOM 7 C4' U B1389 -3.212 -43.783 22.125 1.00 12.13 C
ATOM 8 O4' U B1389 -3.584 -42.423 21.766 1.00 12.13 O
ATOM 9 C3' U B1389 -3.504 -43.914 23.620 1.00 12.13 C
ATOM 10 O3' U B1389 -2.301 -43.777 24.364 1.00 12.13 O
ATOM 11 C2' U B1389 -4.413 -42.726 23.901 1.00 12.13 C
ATOM 12 O2' U B1389 -4.355 -42.246 25.211 1.00 12.13 O
ATOM 13 C1' U B1389 -3.862 -41.716 22.946 1.00 12.13 C
ATOM 14 N1 U B1389 -4.766 -40.612 22.665 1.00 11.54 N
ATOM 15 C2 U B1389 -4.177 -39.417 22.953 1.00 11.54 C
ATOM 16 O2 U B1389 -3.053 -39.298 23.346 1.00 11.54 O
ATOM 17 N3 U B1389 -4.891 -38.319 22.755 1.00 11.54 N
ATOM 18 C4 U B1389 -6.149 -38.308 22.326 1.00 11.54 C
ATOM 19 O4 U B1389 -6.572 -37.177 22.237 1.00 11.54 O
ATOM 20 C5 U B1389 -6.771 -39.575 22.057 1.00 11.54 C
ATOM 21 C6 U B1389 -6.061 -40.687 22.253 1.00 11.54 C
ATOM 22 P U B1390 -1.454 -45.073 24.725 1.00 0.01 P
ATOM 23 OP1 U B1390 -0.148 -44.626 25.181 1.00 0.01 O
ATOM 24 OP2 U B1390 -1.527 -45.951 23.566 1.00 0.01 O
ATOM 25 O5' U B1390 -2.248 -45.700 25.951 1.00 0.01 O
TER
ATOM 2 P U A1390 -1.454 -45.073 24.725 1.00 0.01 P
ATOM 3 OP1 U A1390 -0.148 -44.626 25.181 1.00 0.01 O
ATOM 4 OP2 U A1390 -1.527 -45.951 23.566 1.00 0.01 O
ATOM 5 O5' U A1390 -2.248 -45.700 25.951 1.00 0.01 O
ATOM 6 C5' U A1390 -2.082 -45.164 27.262 1.00 0.01 C
ATOM 7 C4' U A1390 -2.343 -46.180 28.367 1.00 0.01 C
ATOM 8 O4' U A1390 -3.766 -46.407 28.487 1.00 0.01 O
ATOM 9 C3' U A1390 -1.710 -47.555 28.190 1.00 0.01 C
ATOM 10 O3' U A1390 -1.257 -48.035 29.459 1.00 0.01 O
ATOM 11 C2' U A1390 -2.874 -48.396 27.681 1.00 0.01 C
ATOM 12 O2' U A1390 -2.784 -49.771 27.939 1.00 0.01 O
ATOM 13 C1' U A1390 -4.043 -47.774 28.406 1.00 0.01 C
ATOM 14 N1 U A1390 -5.273 -47.905 27.694 1.00 0.06 N
ATOM 15 C2 U A1390 -6.288 -48.547 28.287 1.00 0.06 C
ATOM 16 O2 U A1390 -6.191 -48.994 29.399 1.00 0.06 O
ATOM 17 N3 U A1390 -7.407 -48.640 27.533 1.00 0.06 N
ATOM 18 C4 U A1390 -7.596 -48.141 26.274 1.00 0.06 C
ATOM 19 O4 U A1390 -8.676 -48.307 25.728 1.00 0.06 O
ATOM 20 C5 U A1390 -6.479 -47.481 25.711 1.00 0.06 C
ATOM 21 C6 U A1390 -5.374 -47.392 26.444 1.00 0.06 C
ATOM 22 P C A1391 0.300 -47.886 29.864 1.00 0.01 P
ATOM 23 OP1 C A1391 0.411 -48.055 31.326 1.00 0.01 O
ATOM 24 OP2 C A1391 0.778 -46.629 29.279 1.00 0.01 O
ATOM 25 O5' C A1391 0.968 -49.128 29.136 1.00 0.01 O
TER
ATOM 1 O3' A B1388 -5.679 -46.931 22.403 1.00 0.01 O
ATOM 2 P U B1389 -6.266 -45.943 21.287 1.00 12.13 P
ATOM 3 OP1 U B1389 -7.639 -45.605 21.697 1.00 12.13 O
ATOM 4 OP2 U B1389 -6.045 -46.582 19.965 1.00 12.13 O
ATOM 5 O5' U B1389 -5.350 -44.667 21.433 1.00 12.13 O
ATOM 6 C5' U B1389 -3.951 -44.753 21.240 1.00 12.13 C
ATOM 7 C4' U B1389 -3.212 -43.783 22.125 1.00 12.13 C
ATOM 8 O4' U B1389 -3.584 -42.423 21.766 1.00 12.13 O
ATOM 9 C3' U B1389 -3.504 -43.914 23.620 1.00 12.13 C
ATOM 10 O3' U B1389 -2.301 -43.777 24.364 1.00 12.13 O
ATOM 11 C2' U B1389 -4.413 -42.726 23.901 1.00 12.13 C
ATOM 12 O2' U B1389 -4.355 -42.246 25.211 1.00 12.13 O
ATOM 13 C1' U B1389 -3.862 -41.716 22.946 1.00 12.13 C
ATOM 14 N1 U B1389 -4.766 -40.612 22.665 1.00 11.54 N
ATOM 15 C2 U B1389 -4.177 -39.417 22.953 1.00 11.54 C
ATOM 16 O2 U B1389 -3.053 -39.298 23.346 1.00 11.54 O
ATOM 17 N3 U B1389 -4.891 -38.319 22.755 1.00 11.54 N
ATOM 18 C4 U B1389 -6.149 -38.308 22.326 1.00 11.54 C
ATOM 19 O4 U B1389 -6.572 -37.177 22.237 1.00 11.54 O
ATOM 20 C5 U B1389 -6.771 -39.575 22.057 1.00 11.54 C
ATOM 21 C6 U B1389 -6.061 -40.687 22.253 1.00 11.54 C
ATOM 22 P U B1390 -1.454 -45.073 24.725 1.00 0.01 P
ATOM 23 OP1 U B1390 -0.148 -44.626 25.181 1.00 0.01 O
ATOM 24 OP2 U B1390 -1.527 -45.951 23.566 1.00 0.01 O
ATOM 25 O5' U B1390 -2.248 -45.700 25.951 1.00 0.01 O
TER
Atoms:
C4: (-7.596,-48.141,26.274)
N3: (-7.407,-48.640,27.533)
OP1: (-0.148,-44.626,25.181)
OP2: (-1.527,-45.951,23.566)
C2: (-6.288,-48.547,28.287)
C1': (-4.043,-47.774,28.406)
C3': (-1.710,-47.555,28.190)
O5': (-2.248,-45.700,25.951)
O4': (-3.766,-46.407,28.487)
C5': (-2.082,-45.164,27.262)
P: (-1.454,-45.073,24.725)
C4': (-2.343,-46.180,28.367)
C2': (-2.874,-48.396,27.681)
O2': (-2.784,-49.771,27.939)
N1: (-5.273,-47.905,27.694)
O4: (-8.676,-48.307,25.728)
O2: (-6.191,-48.994,29.399)
C6: (-5.374,-47.392,26.444)
C5: (-6.479,-47.481,25.711)
O3': (-1.257,-48.035,29.459)
N3: (-7.407,-48.640,27.533)
OP1: (-0.148,-44.626,25.181)
OP2: (-1.527,-45.951,23.566)
C2: (-6.288,-48.547,28.287)
C1': (-4.043,-47.774,28.406)
C3': (-1.710,-47.555,28.190)
O5': (-2.248,-45.700,25.951)
O4': (-3.766,-46.407,28.487)
C5': (-2.082,-45.164,27.262)
P: (-1.454,-45.073,24.725)
C4': (-2.343,-46.180,28.367)
C2': (-2.874,-48.396,27.681)
O2': (-2.784,-49.771,27.939)
N1: (-5.273,-47.905,27.694)
O4: (-8.676,-48.307,25.728)
O2: (-6.191,-48.994,29.399)
C6: (-5.374,-47.392,26.444)
C5: (-6.479,-47.481,25.711)
O3': (-1.257,-48.035,29.459)
C4: (-6.149,-38.308,22.326)
N3: (-4.891,-38.319,22.755)
OP1: (-7.639,-45.605,21.697)
OP2: (-6.045,-46.582,19.965)
C2: (-4.177,-39.417,22.953)
C1': (-3.862,-41.716,22.946)
C3': (-3.504,-43.914,23.620)
O5': (-5.350,-44.667,21.433)
O4': (-3.584,-42.423,21.766)
C5': (-3.951,-44.753,21.240)
P: (-6.266,-45.943,21.287)
C4': (-3.212,-43.783,22.125)
C2': (-4.413,-42.726,23.901)
O2': (-4.355,-42.246,25.211)
N1: (-4.766,-40.612,22.665)
O4: (-6.572,-37.177,22.237)
O2: (-3.053,-39.298,23.346)
C6: (-6.061,-40.687,22.253)
C5: (-6.771,-39.575,22.057)
O3': (-2.301,-43.777,24.364)
N3: (-4.891,-38.319,22.755)
OP1: (-7.639,-45.605,21.697)
OP2: (-6.045,-46.582,19.965)
C2: (-4.177,-39.417,22.953)
C1': (-3.862,-41.716,22.946)
C3': (-3.504,-43.914,23.620)
O5': (-5.350,-44.667,21.433)
O4': (-3.584,-42.423,21.766)
C5': (-3.951,-44.753,21.240)
P: (-6.266,-45.943,21.287)
C4': (-3.212,-43.783,22.125)
C2': (-4.413,-42.726,23.901)
O2': (-4.355,-42.246,25.211)
N1: (-4.766,-40.612,22.665)
O4: (-6.572,-37.177,22.237)
O2: (-3.053,-39.298,23.346)
C6: (-6.061,-40.687,22.253)
C5: (-6.771,-39.575,22.057)
O3': (-2.301,-43.777,24.364)
Image (generated by PyMOL):