Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ4:059:061
Extra
PDB:
ATOM 1 O3' U A 58 56.414 164.722 27.106 1.00 55.66 O
ATOM 2 P A A 59 55.653 165.119 28.463 1.00 56.07 P
ATOM 3 OP1 A A 59 54.385 165.786 28.105 1.00 59.01 O
ATOM 4 OP2 A A 59 56.614 165.829 29.345 1.00 57.83 O
ATOM 5 O5' A A 59 55.288 163.700 29.094 1.00 56.19 O
ATOM 6 C5' A A 59 56.315 162.735 29.274 1.00 55.77 C
ATOM 7 C4' A A 59 55.908 161.644 30.233 1.00 55.75 C
ATOM 8 O4' A A 59 57.184 161.108 30.680 1.00 57.43 O
ATOM 9 C3' A A 59 55.148 162.022 31.513 1.00 55.01 C
ATOM 10 O3' A A 59 53.753 161.676 31.424 1.00 55.12 O
ATOM 11 C2' A A 59 55.844 161.183 32.577 1.00 55.57 C
ATOM 12 O2' A A 59 55.401 159.844 32.556 1.00 52.36 O
ATOM 13 C1' A A 59 57.285 161.219 32.080 1.00 58.16 C
ATOM 14 N9 A A 59 58.006 162.457 32.404 1.00 60.49 N
ATOM 15 C8 A A 59 57.826 163.717 31.882 1.00 59.72 C
ATOM 16 N7 A A 59 58.610 164.625 32.410 1.00 60.81 N
ATOM 17 C5 A A 59 59.362 163.919 33.340 1.00 61.00 C
ATOM 18 C6 A A 59 60.365 164.312 34.246 1.00 60.89 C
ATOM 19 N6 A A 59 60.797 165.565 34.380 1.00 60.75 N
ATOM 20 N1 A A 59 60.913 163.359 35.027 1.00 60.98 N
ATOM 21 C2 A A 59 60.475 162.105 34.909 1.00 60.94 C
ATOM 22 N3 A A 59 59.538 161.612 34.106 1.00 61.50 N
ATOM 23 C4 A A 59 59.011 162.582 33.338 1.00 61.28 C
ATOM 24 P A A 60 52.755 161.933 32.678 1.00 53.40 P
ATOM 25 OP1 A A 60 52.040 163.218 32.487 1.00 53.76 O
ATOM 26 OP2 A A 60 53.507 161.712 33.928 1.00 56.13 O
ATOM 27 O5' A A 60 51.682 160.756 32.565 1.00 53.61 O
TER
ATOM 1 O3' A B 60 47.252 158.849 32.388 1.00 60.65 O
ATOM 2 P G B 61 46.737 159.054 30.882 1.00 61.58 P
ATOM 3 OP1 G B 61 46.070 160.380 30.778 1.00 61.02 O
ATOM 4 OP2 G B 61 45.996 157.824 30.489 1.00 61.83 O
ATOM 5 O5' G B 61 48.097 159.098 30.064 1.00 61.35 O
ATOM 6 C5' G B 61 48.168 159.672 28.761 1.00 60.61 C
ATOM 7 C4' G B 61 49.413 160.505 28.654 1.00 61.19 C
ATOM 8 O4' G B 61 50.490 159.852 29.377 1.00 59.50 O
ATOM 9 C3' G B 61 49.949 160.695 27.248 1.00 61.56 C
ATOM 10 O3' G B 61 49.244 161.735 26.562 1.00 63.20 O
ATOM 11 C2' G B 61 51.423 160.984 27.519 1.00 59.81 C
ATOM 12 O2' G B 61 51.640 162.292 28.007 1.00 60.72 O
ATOM 13 C1' G B 61 51.705 160.023 28.677 1.00 57.35 C
ATOM 14 N9 G B 61 52.176 158.700 28.281 1.00 54.26 N
ATOM 15 C8 G B 61 51.526 157.505 28.478 1.00 53.37 C
ATOM 16 N7 G B 61 52.195 156.478 28.034 1.00 51.97 N
ATOM 17 C5 G B 61 53.355 157.026 27.507 1.00 52.53 C
ATOM 18 C6 G B 61 54.461 156.401 26.882 1.00 52.80 C
ATOM 19 O6 G B 61 54.641 155.199 26.656 1.00 55.24 O
ATOM 20 N1 G B 61 55.421 157.326 26.498 1.00 52.62 N
ATOM 21 C2 G B 61 55.329 158.680 26.681 1.00 53.57 C
ATOM 22 N2 G B 61 56.360 159.405 26.227 1.00 54.28 N
ATOM 23 N3 G B 61 54.302 159.279 27.264 1.00 53.37 N
ATOM 24 C4 G B 61 53.358 158.397 27.650 1.00 53.02 C
ATOM 25 P C B 62 48.688 161.476 25.066 1.00 65.26 P
ATOM 26 OP1 C B 62 47.744 162.581 24.753 1.00 64.99 O
ATOM 27 OP2 C B 62 48.236 160.070 24.916 1.00 64.90 O
ATOM 28 O5' C B 62 49.980 161.628 24.151 1.00 63.89 O
TER
ATOM 2 P A A 59 55.653 165.119 28.463 1.00 56.07 P
ATOM 3 OP1 A A 59 54.385 165.786 28.105 1.00 59.01 O
ATOM 4 OP2 A A 59 56.614 165.829 29.345 1.00 57.83 O
ATOM 5 O5' A A 59 55.288 163.700 29.094 1.00 56.19 O
ATOM 6 C5' A A 59 56.315 162.735 29.274 1.00 55.77 C
ATOM 7 C4' A A 59 55.908 161.644 30.233 1.00 55.75 C
ATOM 8 O4' A A 59 57.184 161.108 30.680 1.00 57.43 O
ATOM 9 C3' A A 59 55.148 162.022 31.513 1.00 55.01 C
ATOM 10 O3' A A 59 53.753 161.676 31.424 1.00 55.12 O
ATOM 11 C2' A A 59 55.844 161.183 32.577 1.00 55.57 C
ATOM 12 O2' A A 59 55.401 159.844 32.556 1.00 52.36 O
ATOM 13 C1' A A 59 57.285 161.219 32.080 1.00 58.16 C
ATOM 14 N9 A A 59 58.006 162.457 32.404 1.00 60.49 N
ATOM 15 C8 A A 59 57.826 163.717 31.882 1.00 59.72 C
ATOM 16 N7 A A 59 58.610 164.625 32.410 1.00 60.81 N
ATOM 17 C5 A A 59 59.362 163.919 33.340 1.00 61.00 C
ATOM 18 C6 A A 59 60.365 164.312 34.246 1.00 60.89 C
ATOM 19 N6 A A 59 60.797 165.565 34.380 1.00 60.75 N
ATOM 20 N1 A A 59 60.913 163.359 35.027 1.00 60.98 N
ATOM 21 C2 A A 59 60.475 162.105 34.909 1.00 60.94 C
ATOM 22 N3 A A 59 59.538 161.612 34.106 1.00 61.50 N
ATOM 23 C4 A A 59 59.011 162.582 33.338 1.00 61.28 C
ATOM 24 P A A 60 52.755 161.933 32.678 1.00 53.40 P
ATOM 25 OP1 A A 60 52.040 163.218 32.487 1.00 53.76 O
ATOM 26 OP2 A A 60 53.507 161.712 33.928 1.00 56.13 O
ATOM 27 O5' A A 60 51.682 160.756 32.565 1.00 53.61 O
TER
ATOM 1 O3' A B 60 47.252 158.849 32.388 1.00 60.65 O
ATOM 2 P G B 61 46.737 159.054 30.882 1.00 61.58 P
ATOM 3 OP1 G B 61 46.070 160.380 30.778 1.00 61.02 O
ATOM 4 OP2 G B 61 45.996 157.824 30.489 1.00 61.83 O
ATOM 5 O5' G B 61 48.097 159.098 30.064 1.00 61.35 O
ATOM 6 C5' G B 61 48.168 159.672 28.761 1.00 60.61 C
ATOM 7 C4' G B 61 49.413 160.505 28.654 1.00 61.19 C
ATOM 8 O4' G B 61 50.490 159.852 29.377 1.00 59.50 O
ATOM 9 C3' G B 61 49.949 160.695 27.248 1.00 61.56 C
ATOM 10 O3' G B 61 49.244 161.735 26.562 1.00 63.20 O
ATOM 11 C2' G B 61 51.423 160.984 27.519 1.00 59.81 C
ATOM 12 O2' G B 61 51.640 162.292 28.007 1.00 60.72 O
ATOM 13 C1' G B 61 51.705 160.023 28.677 1.00 57.35 C
ATOM 14 N9 G B 61 52.176 158.700 28.281 1.00 54.26 N
ATOM 15 C8 G B 61 51.526 157.505 28.478 1.00 53.37 C
ATOM 16 N7 G B 61 52.195 156.478 28.034 1.00 51.97 N
ATOM 17 C5 G B 61 53.355 157.026 27.507 1.00 52.53 C
ATOM 18 C6 G B 61 54.461 156.401 26.882 1.00 52.80 C
ATOM 19 O6 G B 61 54.641 155.199 26.656 1.00 55.24 O
ATOM 20 N1 G B 61 55.421 157.326 26.498 1.00 52.62 N
ATOM 21 C2 G B 61 55.329 158.680 26.681 1.00 53.57 C
ATOM 22 N2 G B 61 56.360 159.405 26.227 1.00 54.28 N
ATOM 23 N3 G B 61 54.302 159.279 27.264 1.00 53.37 N
ATOM 24 C4 G B 61 53.358 158.397 27.650 1.00 53.02 C
ATOM 25 P C B 62 48.688 161.476 25.066 1.00 65.26 P
ATOM 26 OP1 C B 62 47.744 162.581 24.753 1.00 64.99 O
ATOM 27 OP2 C B 62 48.236 160.070 24.916 1.00 64.90 O
ATOM 28 O5' C B 62 49.980 161.628 24.151 1.00 63.89 O
TER
Atoms:
OP1: (54.385,165.786,28.105)
OP2: (56.614,165.829,29.345)
C3': (55.148,162.022,31.513)
C1': (57.285,161.219,32.080)
C5': (56.315,162.735,29.274)
O4': (57.184,161.108,30.680)
C8: (57.826,163.717,31.882)
O2': (55.401,159.844,32.556)
C6: (60.365,164.312,34.246)
C5: (59.362,163.919,33.340)
C4: (59.011,162.582,33.338)
P: (55.653,165.119,28.463)
C4': (55.908,161.644,30.233)
C2': (55.844,161.183,32.577)
C2: (60.475,162.105,34.909)
N1: (60.913,163.359,35.027)
N3: (59.538,161.612,34.106)
N6: (60.797,165.565,34.380)
N7: (58.610,164.625,32.410)
N9: (58.006,162.457,32.404)
O5': (55.288,163.700,29.094)
O3': (53.753,161.676,31.424)
OP2: (56.614,165.829,29.345)
C3': (55.148,162.022,31.513)
C1': (57.285,161.219,32.080)
C5': (56.315,162.735,29.274)
O4': (57.184,161.108,30.680)
C8: (57.826,163.717,31.882)
O2': (55.401,159.844,32.556)
C6: (60.365,164.312,34.246)
C5: (59.362,163.919,33.340)
C4: (59.011,162.582,33.338)
P: (55.653,165.119,28.463)
C4': (55.908,161.644,30.233)
C2': (55.844,161.183,32.577)
C2: (60.475,162.105,34.909)
N1: (60.913,163.359,35.027)
N3: (59.538,161.612,34.106)
N6: (60.797,165.565,34.380)
N7: (58.610,164.625,32.410)
N9: (58.006,162.457,32.404)
O5': (55.288,163.700,29.094)
O3': (53.753,161.676,31.424)
OP1: (46.070,160.380,30.778)
OP2: (45.996,157.824,30.489)
C3': (49.949,160.695,27.248)
C1': (51.705,160.023,28.677)
C5': (48.168,159.672,28.761)
O6: (54.641,155.199,26.656)
O4': (50.490,159.852,29.377)
C8: (51.526,157.505,28.478)
C2: (55.329,158.680,26.681)
C6: (54.461,156.401,26.882)
C5: (53.355,157.026,27.507)
C4: (53.358,158.397,27.650)
P: (46.737,159.054,30.882)
C4': (49.413,160.505,28.654)
C2': (51.423,160.984,27.519)
O2': (51.640,162.292,28.007)
N1: (55.421,157.326,26.498)
N2: (56.360,159.405,26.227)
N3: (54.302,159.279,27.264)
N7: (52.195,156.478,28.034)
N9: (52.176,158.700,28.281)
O5': (48.097,159.098,30.064)
O3': (49.244,161.735,26.562)
OP2: (45.996,157.824,30.489)
C3': (49.949,160.695,27.248)
C1': (51.705,160.023,28.677)
C5': (48.168,159.672,28.761)
O6: (54.641,155.199,26.656)
O4': (50.490,159.852,29.377)
C8: (51.526,157.505,28.478)
C2: (55.329,158.680,26.681)
C6: (54.461,156.401,26.882)
C5: (53.355,157.026,27.507)
C4: (53.358,158.397,27.650)
P: (46.737,159.054,30.882)
C4': (49.413,160.505,28.654)
C2': (51.423,160.984,27.519)
O2': (51.640,162.292,28.007)
N1: (55.421,157.326,26.498)
N2: (56.360,159.405,26.227)
N3: (54.302,159.279,27.264)
N7: (52.195,156.478,28.034)
N9: (52.176,158.700,28.281)
O5': (48.097,159.098,30.064)
O3': (49.244,161.735,26.562)
Image (generated by PyMOL):