Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ5:059:061
Extra
PDB:
ATOM 1 O3' U A 58 55.993 164.267 27.133 1.00 48.83 O
ATOM 2 P A A 59 55.247 164.752 28.459 1.00 51.07 P
ATOM 3 OP1 A A 59 53.810 164.940 28.135 1.00 52.02 O
ATOM 4 OP2 A A 59 56.010 165.874 29.080 1.00 52.25 O
ATOM 5 O5' A A 59 55.379 163.499 29.425 1.00 51.97 O
ATOM 6 C5' A A 59 54.891 162.212 29.046 1.00 49.15 C
ATOM 7 C4' A A 59 55.117 161.248 30.174 1.00 50.00 C
ATOM 8 O4' A A 59 56.538 161.211 30.475 1.00 49.35 O
ATOM 9 C3' A A 59 54.469 161.652 31.488 1.00 49.47 C
ATOM 10 O3' A A 59 53.121 161.218 31.533 1.00 49.65 O
ATOM 11 C2' A A 59 55.335 160.923 32.498 1.00 49.47 C
ATOM 12 O2' A A 59 54.991 159.557 32.533 1.00 48.98 O
ATOM 13 C1' A A 59 56.723 161.093 31.874 1.00 49.62 C
ATOM 14 N9 A A 59 57.425 162.291 32.345 1.00 50.92 N
ATOM 15 C8 A A 59 57.227 163.590 31.946 1.00 49.62 C
ATOM 16 N7 A A 59 57.995 164.455 32.562 1.00 49.98 N
ATOM 17 C5 A A 59 58.755 163.678 33.425 1.00 49.58 C
ATOM 18 C6 A A 59 59.754 163.999 34.361 1.00 47.68 C
ATOM 19 N6 A A 59 60.184 165.236 34.590 1.00 45.51 N
ATOM 20 N1 A A 59 60.307 162.989 35.060 1.00 47.99 N
ATOM 21 C2 A A 59 59.888 161.749 34.828 1.00 48.46 C
ATOM 22 N3 A A 59 58.962 161.315 33.978 1.00 50.60 N
ATOM 23 C4 A A 59 58.422 162.342 33.298 1.00 51.37 C
ATOM 24 P A A 60 52.164 161.663 32.744 1.00 49.62 P
ATOM 25 OP1 A A 60 51.495 162.944 32.407 1.00 53.27 O
ATOM 26 OP2 A A 60 52.938 161.565 33.997 1.00 51.73 O
ATOM 27 O5' A A 60 51.067 160.507 32.755 1.00 50.85 O
TER
ATOM 1 O3' A B 60 46.653 158.655 32.308 1.00 62.32 O
ATOM 2 P G B 61 46.191 158.792 30.778 1.00 64.97 P
ATOM 3 OP1 G B 61 45.456 160.085 30.621 1.00 63.59 O
ATOM 4 OP2 G B 61 45.523 157.510 30.398 1.00 65.33 O
ATOM 5 O5' G B 61 47.579 158.886 30.011 1.00 62.35 O
ATOM 6 C5' G B 61 47.669 159.426 28.695 1.00 60.19 C
ATOM 7 C4' G B 61 48.921 160.248 28.575 1.00 60.05 C
ATOM 8 O4' G B 61 49.996 159.602 29.305 1.00 57.41 O
ATOM 9 C3' G B 61 49.444 160.420 27.161 1.00 59.62 C
ATOM 10 O3' G B 61 48.758 161.492 26.503 1.00 60.41 O
ATOM 11 C2' G B 61 50.930 160.676 27.404 1.00 57.93 C
ATOM 12 O2' G B 61 51.199 161.996 27.825 1.00 59.75 O
ATOM 13 C1' G B 61 51.207 159.749 28.593 1.00 55.46 C
ATOM 14 N9 G B 61 51.664 158.414 28.227 1.00 52.42 N
ATOM 15 C8 G B 61 51.015 157.227 28.466 1.00 50.40 C
ATOM 16 N7 G B 61 51.664 156.189 28.013 1.00 50.43 N
ATOM 17 C5 G B 61 52.809 156.724 27.441 1.00 50.80 C
ATOM 18 C6 G B 61 53.890 156.085 26.780 1.00 52.04 C
ATOM 19 O6 G B 61 54.055 154.882 26.554 1.00 54.05 O
ATOM 20 N1 G B 61 54.843 157.001 26.362 1.00 52.85 N
ATOM 21 C2 G B 61 54.770 158.357 26.551 1.00 54.04 C
ATOM 22 N2 G B 61 55.800 159.074 26.077 1.00 54.76 N
ATOM 23 N3 G B 61 53.765 158.965 27.159 1.00 52.38 N
ATOM 24 C4 G B 61 52.828 158.094 27.574 1.00 50.98 C
ATOM 25 P C B 62 48.184 161.292 25.003 1.00 61.30 P
ATOM 26 OP1 C B 62 47.318 162.471 24.730 1.00 60.82 O
ATOM 27 OP2 C B 62 47.632 159.924 24.824 1.00 60.00 O
ATOM 28 O5' C B 62 49.474 161.414 24.082 1.00 58.29 O
TER
ATOM 2 P A A 59 55.247 164.752 28.459 1.00 51.07 P
ATOM 3 OP1 A A 59 53.810 164.940 28.135 1.00 52.02 O
ATOM 4 OP2 A A 59 56.010 165.874 29.080 1.00 52.25 O
ATOM 5 O5' A A 59 55.379 163.499 29.425 1.00 51.97 O
ATOM 6 C5' A A 59 54.891 162.212 29.046 1.00 49.15 C
ATOM 7 C4' A A 59 55.117 161.248 30.174 1.00 50.00 C
ATOM 8 O4' A A 59 56.538 161.211 30.475 1.00 49.35 O
ATOM 9 C3' A A 59 54.469 161.652 31.488 1.00 49.47 C
ATOM 10 O3' A A 59 53.121 161.218 31.533 1.00 49.65 O
ATOM 11 C2' A A 59 55.335 160.923 32.498 1.00 49.47 C
ATOM 12 O2' A A 59 54.991 159.557 32.533 1.00 48.98 O
ATOM 13 C1' A A 59 56.723 161.093 31.874 1.00 49.62 C
ATOM 14 N9 A A 59 57.425 162.291 32.345 1.00 50.92 N
ATOM 15 C8 A A 59 57.227 163.590 31.946 1.00 49.62 C
ATOM 16 N7 A A 59 57.995 164.455 32.562 1.00 49.98 N
ATOM 17 C5 A A 59 58.755 163.678 33.425 1.00 49.58 C
ATOM 18 C6 A A 59 59.754 163.999 34.361 1.00 47.68 C
ATOM 19 N6 A A 59 60.184 165.236 34.590 1.00 45.51 N
ATOM 20 N1 A A 59 60.307 162.989 35.060 1.00 47.99 N
ATOM 21 C2 A A 59 59.888 161.749 34.828 1.00 48.46 C
ATOM 22 N3 A A 59 58.962 161.315 33.978 1.00 50.60 N
ATOM 23 C4 A A 59 58.422 162.342 33.298 1.00 51.37 C
ATOM 24 P A A 60 52.164 161.663 32.744 1.00 49.62 P
ATOM 25 OP1 A A 60 51.495 162.944 32.407 1.00 53.27 O
ATOM 26 OP2 A A 60 52.938 161.565 33.997 1.00 51.73 O
ATOM 27 O5' A A 60 51.067 160.507 32.755 1.00 50.85 O
TER
ATOM 1 O3' A B 60 46.653 158.655 32.308 1.00 62.32 O
ATOM 2 P G B 61 46.191 158.792 30.778 1.00 64.97 P
ATOM 3 OP1 G B 61 45.456 160.085 30.621 1.00 63.59 O
ATOM 4 OP2 G B 61 45.523 157.510 30.398 1.00 65.33 O
ATOM 5 O5' G B 61 47.579 158.886 30.011 1.00 62.35 O
ATOM 6 C5' G B 61 47.669 159.426 28.695 1.00 60.19 C
ATOM 7 C4' G B 61 48.921 160.248 28.575 1.00 60.05 C
ATOM 8 O4' G B 61 49.996 159.602 29.305 1.00 57.41 O
ATOM 9 C3' G B 61 49.444 160.420 27.161 1.00 59.62 C
ATOM 10 O3' G B 61 48.758 161.492 26.503 1.00 60.41 O
ATOM 11 C2' G B 61 50.930 160.676 27.404 1.00 57.93 C
ATOM 12 O2' G B 61 51.199 161.996 27.825 1.00 59.75 O
ATOM 13 C1' G B 61 51.207 159.749 28.593 1.00 55.46 C
ATOM 14 N9 G B 61 51.664 158.414 28.227 1.00 52.42 N
ATOM 15 C8 G B 61 51.015 157.227 28.466 1.00 50.40 C
ATOM 16 N7 G B 61 51.664 156.189 28.013 1.00 50.43 N
ATOM 17 C5 G B 61 52.809 156.724 27.441 1.00 50.80 C
ATOM 18 C6 G B 61 53.890 156.085 26.780 1.00 52.04 C
ATOM 19 O6 G B 61 54.055 154.882 26.554 1.00 54.05 O
ATOM 20 N1 G B 61 54.843 157.001 26.362 1.00 52.85 N
ATOM 21 C2 G B 61 54.770 158.357 26.551 1.00 54.04 C
ATOM 22 N2 G B 61 55.800 159.074 26.077 1.00 54.76 N
ATOM 23 N3 G B 61 53.765 158.965 27.159 1.00 52.38 N
ATOM 24 C4 G B 61 52.828 158.094 27.574 1.00 50.98 C
ATOM 25 P C B 62 48.184 161.292 25.003 1.00 61.30 P
ATOM 26 OP1 C B 62 47.318 162.471 24.730 1.00 60.82 O
ATOM 27 OP2 C B 62 47.632 159.924 24.824 1.00 60.00 O
ATOM 28 O5' C B 62 49.474 161.414 24.082 1.00 58.29 O
TER
Atoms:
OP1: (53.810,164.940,28.135)
OP2: (56.010,165.874,29.080)
C3': (54.469,161.652,31.488)
C1': (56.723,161.093,31.874)
C5': (54.891,162.212,29.046)
O4': (56.538,161.211,30.475)
C8: (57.227,163.590,31.946)
O2': (54.991,159.557,32.533)
C6: (59.754,163.999,34.361)
C5: (58.755,163.678,33.425)
C4: (58.422,162.342,33.298)
P: (55.247,164.752,28.459)
C4': (55.117,161.248,30.174)
C2': (55.335,160.923,32.498)
C2: (59.888,161.749,34.828)
N1: (60.307,162.989,35.060)
N3: (58.962,161.315,33.978)
N6: (60.184,165.236,34.590)
N7: (57.995,164.455,32.562)
N9: (57.425,162.291,32.345)
O5': (55.379,163.499,29.425)
O3': (53.121,161.218,31.533)
OP2: (56.010,165.874,29.080)
C3': (54.469,161.652,31.488)
C1': (56.723,161.093,31.874)
C5': (54.891,162.212,29.046)
O4': (56.538,161.211,30.475)
C8: (57.227,163.590,31.946)
O2': (54.991,159.557,32.533)
C6: (59.754,163.999,34.361)
C5: (58.755,163.678,33.425)
C4: (58.422,162.342,33.298)
P: (55.247,164.752,28.459)
C4': (55.117,161.248,30.174)
C2': (55.335,160.923,32.498)
C2: (59.888,161.749,34.828)
N1: (60.307,162.989,35.060)
N3: (58.962,161.315,33.978)
N6: (60.184,165.236,34.590)
N7: (57.995,164.455,32.562)
N9: (57.425,162.291,32.345)
O5': (55.379,163.499,29.425)
O3': (53.121,161.218,31.533)
OP1: (45.456,160.085,30.621)
OP2: (45.523,157.510,30.398)
C3': (49.444,160.420,27.161)
C1': (51.207,159.749,28.593)
C5': (47.669,159.426,28.695)
O6: (54.055,154.882,26.554)
O4': (49.996,159.602,29.305)
C8: (51.015,157.227,28.466)
C2: (54.770,158.357,26.551)
C6: (53.890,156.085,26.780)
C5: (52.809,156.724,27.441)
C4: (52.828,158.094,27.574)
P: (46.191,158.792,30.778)
C4': (48.921,160.248,28.575)
C2': (50.930,160.676,27.404)
O2': (51.199,161.996,27.825)
N1: (54.843,157.001,26.362)
N2: (55.800,159.074,26.077)
N3: (53.765,158.965,27.159)
N7: (51.664,156.189,28.013)
N9: (51.664,158.414,28.227)
O5': (47.579,158.886,30.011)
O3': (48.758,161.492,26.503)
OP2: (45.523,157.510,30.398)
C3': (49.444,160.420,27.161)
C1': (51.207,159.749,28.593)
C5': (47.669,159.426,28.695)
O6: (54.055,154.882,26.554)
O4': (49.996,159.602,29.305)
C8: (51.015,157.227,28.466)
C2: (54.770,158.357,26.551)
C6: (53.890,156.085,26.780)
C5: (52.809,156.724,27.441)
C4: (52.828,158.094,27.574)
P: (46.191,158.792,30.778)
C4': (48.921,160.248,28.575)
C2': (50.930,160.676,27.404)
O2': (51.199,161.996,27.825)
N1: (54.843,157.001,26.362)
N2: (55.800,159.074,26.077)
N3: (53.765,158.965,27.159)
N7: (51.664,156.189,28.013)
N9: (51.664,158.414,28.227)
O5': (47.579,158.886,30.011)
O3': (48.758,161.492,26.503)
Image (generated by PyMOL):