Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQL:059:061
Extra
PDB:
ATOM 1 O3' U A 58 55.376 163.357 26.989 1.00 47.35 O
ATOM 2 P A A 59 54.598 163.815 28.319 1.00 49.90 P
ATOM 3 OP1 A A 59 53.234 164.276 27.944 1.00 47.74 O
ATOM 4 OP2 A A 59 55.490 164.722 29.088 1.00 48.86 O
ATOM 5 O5' A A 59 54.395 162.448 29.115 1.00 50.46 O
ATOM 6 C5' A A 59 55.502 161.593 29.344 1.00 48.55 C
ATOM 7 C4' A A 59 55.129 160.415 30.205 1.00 46.31 C
ATOM 8 O4' A A 59 56.421 159.897 30.617 1.00 47.10 O
ATOM 9 C3' A A 59 54.368 160.703 31.504 1.00 45.76 C
ATOM 10 O3' A A 59 52.998 160.297 31.425 1.00 43.79 O
ATOM 11 C2' A A 59 55.114 159.866 32.536 1.00 46.45 C
ATOM 12 O2' A A 59 54.741 158.509 32.509 1.00 43.17 O
ATOM 13 C1' A A 59 56.542 159.977 32.017 1.00 47.83 C
ATOM 14 N9 A A 59 57.192 161.245 32.365 1.00 48.76 N
ATOM 15 C8 A A 59 56.893 162.519 31.937 1.00 46.80 C
ATOM 16 N7 A A 59 57.635 163.448 32.484 1.00 47.77 N
ATOM 17 C5 A A 59 58.487 162.743 33.324 1.00 48.00 C
ATOM 18 C6 A A 59 59.504 163.152 34.201 1.00 47.03 C
ATOM 19 N6 A A 59 59.841 164.425 34.405 1.00 46.15 N
ATOM 20 N1 A A 59 60.169 162.195 34.880 1.00 49.11 N
ATOM 21 C2 A A 59 59.822 160.918 34.697 1.00 48.21 C
ATOM 22 N3 A A 59 58.878 160.409 33.914 1.00 49.04 N
ATOM 23 C4 A A 59 58.238 161.384 33.246 1.00 49.20 C
ATOM 24 P A A 60 51.967 160.648 32.625 1.00 46.70 P
ATOM 25 OP1 A A 60 51.232 161.906 32.303 1.00 44.61 O
ATOM 26 OP2 A A 60 52.664 160.535 33.931 1.00 44.61 O
ATOM 27 O5' A A 60 50.918 159.453 32.552 1.00 43.72 O
TER
ATOM 1 O3' A B 60 46.576 157.565 32.045 1.00 52.64 O
ATOM 2 P G B 61 45.667 157.960 30.784 1.00 59.00 P
ATOM 3 OP1 G B 61 44.468 158.699 31.274 1.00 57.10 O
ATOM 4 OP2 G B 61 45.495 156.723 29.972 1.00 59.54 O
ATOM 5 O5' G B 61 46.558 158.995 29.968 1.00 56.43 O
ATOM 6 C5' G B 61 47.119 158.652 28.697 1.00 55.59 C
ATOM 7 C4' G B 61 48.447 159.336 28.531 1.00 54.40 C
ATOM 8 O4' G B 61 49.475 158.605 29.253 1.00 52.34 O
ATOM 9 C3' G B 61 48.975 159.396 27.112 1.00 53.78 C
ATOM 10 O3' G B 61 48.340 160.470 26.419 1.00 54.98 O
ATOM 11 C2' G B 61 50.461 159.635 27.355 1.00 53.71 C
ATOM 12 O2' G B 61 50.737 160.967 27.743 1.00 55.99 O
ATOM 13 C1' G B 61 50.711 158.732 28.566 1.00 51.66 C
ATOM 14 N9 G B 61 51.170 157.403 28.177 1.00 49.15 N
ATOM 15 C8 G B 61 50.510 156.208 28.336 1.00 47.44 C
ATOM 16 N7 G B 61 51.169 155.191 27.847 1.00 48.00 N
ATOM 17 C5 G B 61 52.335 155.748 27.340 1.00 46.51 C
ATOM 18 C6 G B 61 53.432 155.141 26.671 1.00 46.78 C
ATOM 19 O6 G B 61 53.592 153.949 26.370 1.00 45.90 O
ATOM 20 N1 G B 61 54.406 156.077 26.337 1.00 46.46 N
ATOM 21 C2 G B 61 54.328 157.422 26.602 1.00 46.04 C
ATOM 22 N2 G B 61 55.367 158.166 26.204 1.00 45.39 N
ATOM 23 N3 G B 61 53.308 157.998 27.213 1.00 45.09 N
ATOM 24 C4 G B 61 52.357 157.109 27.550 1.00 46.28 C
ATOM 25 P C B 62 47.792 160.254 24.918 1.00 54.46 P
ATOM 26 OP1 C B 62 46.909 161.412 24.633 1.00 53.74 O
ATOM 27 OP2 C B 62 47.261 158.881 24.756 1.00 55.00 O
ATOM 28 O5' C B 62 49.100 160.377 24.022 1.00 53.90 O
TER
ATOM 2 P A A 59 54.598 163.815 28.319 1.00 49.90 P
ATOM 3 OP1 A A 59 53.234 164.276 27.944 1.00 47.74 O
ATOM 4 OP2 A A 59 55.490 164.722 29.088 1.00 48.86 O
ATOM 5 O5' A A 59 54.395 162.448 29.115 1.00 50.46 O
ATOM 6 C5' A A 59 55.502 161.593 29.344 1.00 48.55 C
ATOM 7 C4' A A 59 55.129 160.415 30.205 1.00 46.31 C
ATOM 8 O4' A A 59 56.421 159.897 30.617 1.00 47.10 O
ATOM 9 C3' A A 59 54.368 160.703 31.504 1.00 45.76 C
ATOM 10 O3' A A 59 52.998 160.297 31.425 1.00 43.79 O
ATOM 11 C2' A A 59 55.114 159.866 32.536 1.00 46.45 C
ATOM 12 O2' A A 59 54.741 158.509 32.509 1.00 43.17 O
ATOM 13 C1' A A 59 56.542 159.977 32.017 1.00 47.83 C
ATOM 14 N9 A A 59 57.192 161.245 32.365 1.00 48.76 N
ATOM 15 C8 A A 59 56.893 162.519 31.937 1.00 46.80 C
ATOM 16 N7 A A 59 57.635 163.448 32.484 1.00 47.77 N
ATOM 17 C5 A A 59 58.487 162.743 33.324 1.00 48.00 C
ATOM 18 C6 A A 59 59.504 163.152 34.201 1.00 47.03 C
ATOM 19 N6 A A 59 59.841 164.425 34.405 1.00 46.15 N
ATOM 20 N1 A A 59 60.169 162.195 34.880 1.00 49.11 N
ATOM 21 C2 A A 59 59.822 160.918 34.697 1.00 48.21 C
ATOM 22 N3 A A 59 58.878 160.409 33.914 1.00 49.04 N
ATOM 23 C4 A A 59 58.238 161.384 33.246 1.00 49.20 C
ATOM 24 P A A 60 51.967 160.648 32.625 1.00 46.70 P
ATOM 25 OP1 A A 60 51.232 161.906 32.303 1.00 44.61 O
ATOM 26 OP2 A A 60 52.664 160.535 33.931 1.00 44.61 O
ATOM 27 O5' A A 60 50.918 159.453 32.552 1.00 43.72 O
TER
ATOM 1 O3' A B 60 46.576 157.565 32.045 1.00 52.64 O
ATOM 2 P G B 61 45.667 157.960 30.784 1.00 59.00 P
ATOM 3 OP1 G B 61 44.468 158.699 31.274 1.00 57.10 O
ATOM 4 OP2 G B 61 45.495 156.723 29.972 1.00 59.54 O
ATOM 5 O5' G B 61 46.558 158.995 29.968 1.00 56.43 O
ATOM 6 C5' G B 61 47.119 158.652 28.697 1.00 55.59 C
ATOM 7 C4' G B 61 48.447 159.336 28.531 1.00 54.40 C
ATOM 8 O4' G B 61 49.475 158.605 29.253 1.00 52.34 O
ATOM 9 C3' G B 61 48.975 159.396 27.112 1.00 53.78 C
ATOM 10 O3' G B 61 48.340 160.470 26.419 1.00 54.98 O
ATOM 11 C2' G B 61 50.461 159.635 27.355 1.00 53.71 C
ATOM 12 O2' G B 61 50.737 160.967 27.743 1.00 55.99 O
ATOM 13 C1' G B 61 50.711 158.732 28.566 1.00 51.66 C
ATOM 14 N9 G B 61 51.170 157.403 28.177 1.00 49.15 N
ATOM 15 C8 G B 61 50.510 156.208 28.336 1.00 47.44 C
ATOM 16 N7 G B 61 51.169 155.191 27.847 1.00 48.00 N
ATOM 17 C5 G B 61 52.335 155.748 27.340 1.00 46.51 C
ATOM 18 C6 G B 61 53.432 155.141 26.671 1.00 46.78 C
ATOM 19 O6 G B 61 53.592 153.949 26.370 1.00 45.90 O
ATOM 20 N1 G B 61 54.406 156.077 26.337 1.00 46.46 N
ATOM 21 C2 G B 61 54.328 157.422 26.602 1.00 46.04 C
ATOM 22 N2 G B 61 55.367 158.166 26.204 1.00 45.39 N
ATOM 23 N3 G B 61 53.308 157.998 27.213 1.00 45.09 N
ATOM 24 C4 G B 61 52.357 157.109 27.550 1.00 46.28 C
ATOM 25 P C B 62 47.792 160.254 24.918 1.00 54.46 P
ATOM 26 OP1 C B 62 46.909 161.412 24.633 1.00 53.74 O
ATOM 27 OP2 C B 62 47.261 158.881 24.756 1.00 55.00 O
ATOM 28 O5' C B 62 49.100 160.377 24.022 1.00 53.90 O
TER
Atoms:
OP1: (53.234,164.276,27.944)
OP2: (55.490,164.722,29.088)
C3': (54.368,160.703,31.504)
C1': (56.542,159.977,32.017)
C5': (55.502,161.593,29.344)
O4': (56.421,159.897,30.617)
C8: (56.893,162.519,31.937)
O2': (54.741,158.509,32.509)
C6: (59.504,163.152,34.201)
C5: (58.487,162.743,33.324)
C4: (58.238,161.384,33.246)
P: (54.598,163.815,28.319)
C4': (55.129,160.415,30.205)
C2': (55.114,159.866,32.536)
C2: (59.822,160.918,34.697)
N1: (60.169,162.195,34.880)
N3: (58.878,160.409,33.914)
N6: (59.841,164.425,34.405)
N7: (57.635,163.448,32.484)
N9: (57.192,161.245,32.365)
O5': (54.395,162.448,29.115)
O3': (52.998,160.297,31.425)
OP2: (55.490,164.722,29.088)
C3': (54.368,160.703,31.504)
C1': (56.542,159.977,32.017)
C5': (55.502,161.593,29.344)
O4': (56.421,159.897,30.617)
C8: (56.893,162.519,31.937)
O2': (54.741,158.509,32.509)
C6: (59.504,163.152,34.201)
C5: (58.487,162.743,33.324)
C4: (58.238,161.384,33.246)
P: (54.598,163.815,28.319)
C4': (55.129,160.415,30.205)
C2': (55.114,159.866,32.536)
C2: (59.822,160.918,34.697)
N1: (60.169,162.195,34.880)
N3: (58.878,160.409,33.914)
N6: (59.841,164.425,34.405)
N7: (57.635,163.448,32.484)
N9: (57.192,161.245,32.365)
O5': (54.395,162.448,29.115)
O3': (52.998,160.297,31.425)
OP1: (44.468,158.699,31.274)
OP2: (45.495,156.723,29.972)
C3': (48.975,159.396,27.112)
C1': (50.711,158.732,28.566)
C5': (47.119,158.652,28.697)
O6: (53.592,153.949,26.370)
O4': (49.475,158.605,29.253)
C8: (50.510,156.208,28.336)
C2: (54.328,157.422,26.602)
C6: (53.432,155.141,26.671)
C5: (52.335,155.748,27.340)
C4: (52.357,157.109,27.550)
P: (45.667,157.960,30.784)
C4': (48.447,159.336,28.531)
C2': (50.461,159.635,27.355)
O2': (50.737,160.967,27.743)
N1: (54.406,156.077,26.337)
N2: (55.367,158.166,26.204)
N3: (53.308,157.998,27.213)
N7: (51.169,155.191,27.847)
N9: (51.170,157.403,28.177)
O5': (46.558,158.995,29.968)
O3': (48.340,160.470,26.419)
OP2: (45.495,156.723,29.972)
C3': (48.975,159.396,27.112)
C1': (50.711,158.732,28.566)
C5': (47.119,158.652,28.697)
O6: (53.592,153.949,26.370)
O4': (49.475,158.605,29.253)
C8: (50.510,156.208,28.336)
C2: (54.328,157.422,26.602)
C6: (53.432,155.141,26.671)
C5: (52.335,155.748,27.340)
C4: (52.357,157.109,27.550)
P: (45.667,157.960,30.784)
C4': (48.447,159.336,28.531)
C2': (50.461,159.635,27.355)
O2': (50.737,160.967,27.743)
N1: (54.406,156.077,26.337)
N2: (55.367,158.166,26.204)
N3: (53.308,157.998,27.213)
N7: (51.169,155.191,27.847)
N9: (51.170,157.403,28.177)
O5': (46.558,158.995,29.968)
O3': (48.340,160.470,26.419)
Image (generated by PyMOL):