Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3RER:K5:K4
Extra
PDB:
ATOM 1 O3' U A 4 2.561 -2.906 -3.583 1.00 16.62 O
ATOM 2 P U A 5 3.283 -3.461 -2.262 1.00 17.49 P
ATOM 3 OP1 U A 5 2.212 -3.647 -1.258 1.00 17.30 O
ATOM 4 OP2 U A 5 4.442 -2.606 -1.904 1.00 18.30 O
ATOM 5 O5' U A 5 3.885 -4.822 -2.834 1.00 18.38 O
ATOM 6 C5' U A 5 3.120 -6.038 -2.702 1.00 20.69 C
ATOM 7 C4' U A 5 3.965 -7.056 -1.958 1.00 21.51 C
ATOM 8 O4' U A 5 5.204 -7.326 -2.661 1.00 22.88 O
ATOM 9 C3' U A 5 4.425 -6.583 -0.586 1.00 21.40 C
ATOM 10 O3' U A 5 4.423 -7.701 0.291 1.00 18.71 O
ATOM 11 C2' U A 5 5.809 -5.963 -0.789 1.00 23.57 C
ATOM 12 O2' U A 5 6.650 -6.123 0.348 1.00 24.26 O
ATOM 13 C1' U A 5 6.318 -6.739 -1.999 1.00 24.71 C
ATOM 14 N1 U A 5 7.088 -5.948 -3.061 1.00 28.35 N
ATOM 15 C2 U A 5 7.885 -6.716 -3.899 1.00 30.16 C
ATOM 16 O2 U A 5 7.964 -7.932 -3.786 1.00 30.95 O
ATOM 17 N3 U A 5 8.578 -6.013 -4.857 1.00 29.30 N
ATOM 18 C4 U A 5 8.555 -4.638 -5.058 1.00 29.96 C
ATOM 19 O4 U A 5 9.239 -4.159 -5.963 1.00 29.67 O
ATOM 20 C5 U A 5 7.693 -3.891 -4.159 1.00 29.07 C
ATOM 21 C6 U A 5 7.010 -4.564 -3.206 1.00 28.76 C
ATOM 22 P U A 6 3.239 -7.686 1.369 1.00 16.01 P
ATOM 23 OP1 U A 6 2.022 -8.324 0.810 1.00 16.42 O
ATOM 24 OP2 U A 6 3.130 -6.301 1.911 1.00 17.46 O
ATOM 25 O5' U A 6 3.841 -8.663 2.484 1.00 16.78 O
TER
ATOM 1 O3' U B 3 6.391 1.498 -3.605 1.00 14.06 O
ATOM 2 P U B 4 6.486 -0.074 -3.323 1.00 13.67 P
ATOM 3 OP1 U B 4 5.946 -0.270 -1.949 1.00 14.40 O
ATOM 4 OP2 U B 4 7.830 -0.607 -3.693 1.00 14.74 O
ATOM 5 O5' U B 4 5.421 -0.676 -4.356 1.00 14.26 O
ATOM 6 C5' U B 4 4.064 -0.186 -4.340 1.00 14.07 C
ATOM 7 C4' U B 4 3.153 -1.113 -5.116 1.00 15.45 C
ATOM 8 O4' U B 4 3.531 -1.052 -6.510 1.00 14.53 O
ATOM 9 C3' U B 4 3.310 -2.589 -4.774 1.00 15.54 C
ATOM 10 O3' U B 4 2.561 -2.906 -3.583 1.00 16.62 O
ATOM 11 C2' U B 4 2.764 -3.250 -6.048 1.00 15.61 C
ATOM 12 O2' U B 4 1.353 -3.438 -6.026 1.00 16.94 O
ATOM 13 C1' U B 4 3.164 -2.260 -7.140 1.00 14.35 C
ATOM 14 N1 U B 4 4.350 -2.757 -7.914 1.00 13.83 N
ATOM 15 C2 U B 4 4.161 -3.179 -9.215 1.00 14.57 C
ATOM 16 O2 U B 4 3.088 -3.149 -9.768 1.00 12.86 O
ATOM 17 N3 U B 4 5.289 -3.624 -9.858 1.00 13.03 N
ATOM 18 C4 U B 4 6.562 -3.693 -9.314 1.00 14.70 C
ATOM 19 O4 U B 4 7.485 -4.145 -10.002 1.00 14.83 O
ATOM 20 C5 U B 4 6.691 -3.247 -7.947 1.00 14.34 C
ATOM 21 C6 U B 4 5.600 -2.801 -7.313 1.00 15.58 C
ATOM 22 P U B 5 3.283 -3.461 -2.262 1.00 17.49 P
ATOM 23 OP1 U B 5 2.212 -3.647 -1.258 1.00 17.30 O
ATOM 24 OP2 U B 5 4.442 -2.606 -1.904 1.00 18.30 O
ATOM 25 O5' U B 5 3.885 -4.822 -2.834 1.00 18.38 O
TER
ATOM 2 P U A 5 3.283 -3.461 -2.262 1.00 17.49 P
ATOM 3 OP1 U A 5 2.212 -3.647 -1.258 1.00 17.30 O
ATOM 4 OP2 U A 5 4.442 -2.606 -1.904 1.00 18.30 O
ATOM 5 O5' U A 5 3.885 -4.822 -2.834 1.00 18.38 O
ATOM 6 C5' U A 5 3.120 -6.038 -2.702 1.00 20.69 C
ATOM 7 C4' U A 5 3.965 -7.056 -1.958 1.00 21.51 C
ATOM 8 O4' U A 5 5.204 -7.326 -2.661 1.00 22.88 O
ATOM 9 C3' U A 5 4.425 -6.583 -0.586 1.00 21.40 C
ATOM 10 O3' U A 5 4.423 -7.701 0.291 1.00 18.71 O
ATOM 11 C2' U A 5 5.809 -5.963 -0.789 1.00 23.57 C
ATOM 12 O2' U A 5 6.650 -6.123 0.348 1.00 24.26 O
ATOM 13 C1' U A 5 6.318 -6.739 -1.999 1.00 24.71 C
ATOM 14 N1 U A 5 7.088 -5.948 -3.061 1.00 28.35 N
ATOM 15 C2 U A 5 7.885 -6.716 -3.899 1.00 30.16 C
ATOM 16 O2 U A 5 7.964 -7.932 -3.786 1.00 30.95 O
ATOM 17 N3 U A 5 8.578 -6.013 -4.857 1.00 29.30 N
ATOM 18 C4 U A 5 8.555 -4.638 -5.058 1.00 29.96 C
ATOM 19 O4 U A 5 9.239 -4.159 -5.963 1.00 29.67 O
ATOM 20 C5 U A 5 7.693 -3.891 -4.159 1.00 29.07 C
ATOM 21 C6 U A 5 7.010 -4.564 -3.206 1.00 28.76 C
ATOM 22 P U A 6 3.239 -7.686 1.369 1.00 16.01 P
ATOM 23 OP1 U A 6 2.022 -8.324 0.810 1.00 16.42 O
ATOM 24 OP2 U A 6 3.130 -6.301 1.911 1.00 17.46 O
ATOM 25 O5' U A 6 3.841 -8.663 2.484 1.00 16.78 O
TER
ATOM 1 O3' U B 3 6.391 1.498 -3.605 1.00 14.06 O
ATOM 2 P U B 4 6.486 -0.074 -3.323 1.00 13.67 P
ATOM 3 OP1 U B 4 5.946 -0.270 -1.949 1.00 14.40 O
ATOM 4 OP2 U B 4 7.830 -0.607 -3.693 1.00 14.74 O
ATOM 5 O5' U B 4 5.421 -0.676 -4.356 1.00 14.26 O
ATOM 6 C5' U B 4 4.064 -0.186 -4.340 1.00 14.07 C
ATOM 7 C4' U B 4 3.153 -1.113 -5.116 1.00 15.45 C
ATOM 8 O4' U B 4 3.531 -1.052 -6.510 1.00 14.53 O
ATOM 9 C3' U B 4 3.310 -2.589 -4.774 1.00 15.54 C
ATOM 10 O3' U B 4 2.561 -2.906 -3.583 1.00 16.62 O
ATOM 11 C2' U B 4 2.764 -3.250 -6.048 1.00 15.61 C
ATOM 12 O2' U B 4 1.353 -3.438 -6.026 1.00 16.94 O
ATOM 13 C1' U B 4 3.164 -2.260 -7.140 1.00 14.35 C
ATOM 14 N1 U B 4 4.350 -2.757 -7.914 1.00 13.83 N
ATOM 15 C2 U B 4 4.161 -3.179 -9.215 1.00 14.57 C
ATOM 16 O2 U B 4 3.088 -3.149 -9.768 1.00 12.86 O
ATOM 17 N3 U B 4 5.289 -3.624 -9.858 1.00 13.03 N
ATOM 18 C4 U B 4 6.562 -3.693 -9.314 1.00 14.70 C
ATOM 19 O4 U B 4 7.485 -4.145 -10.002 1.00 14.83 O
ATOM 20 C5 U B 4 6.691 -3.247 -7.947 1.00 14.34 C
ATOM 21 C6 U B 4 5.600 -2.801 -7.313 1.00 15.58 C
ATOM 22 P U B 5 3.283 -3.461 -2.262 1.00 17.49 P
ATOM 23 OP1 U B 5 2.212 -3.647 -1.258 1.00 17.30 O
ATOM 24 OP2 U B 5 4.442 -2.606 -1.904 1.00 18.30 O
ATOM 25 O5' U B 5 3.885 -4.822 -2.834 1.00 18.38 O
TER
Atoms:
C4: (8.555,-4.638,-5.058)
N3: (8.578,-6.013,-4.857)
OP1: (2.212,-3.647,-1.258)
OP2: (4.442,-2.606,-1.904)
C2: (7.885,-6.716,-3.899)
C1': (6.318,-6.739,-1.999)
C3': (4.425,-6.583,-0.586)
O5': (3.885,-4.822,-2.834)
O4': (5.204,-7.326,-2.661)
C5': (3.120,-6.038,-2.702)
P: (3.283,-3.461,-2.262)
C4': (3.965,-7.056,-1.958)
C2': (5.809,-5.963,-0.789)
O2': (6.650,-6.123,0.348)
N1: (7.088,-5.948,-3.061)
O4: (9.239,-4.159,-5.963)
O2: (7.964,-7.932,-3.786)
C6: (7.010,-4.564,-3.206)
C5: (7.693,-3.891,-4.159)
O3': (4.423,-7.701,0.291)
N3: (8.578,-6.013,-4.857)
OP1: (2.212,-3.647,-1.258)
OP2: (4.442,-2.606,-1.904)
C2: (7.885,-6.716,-3.899)
C1': (6.318,-6.739,-1.999)
C3': (4.425,-6.583,-0.586)
O5': (3.885,-4.822,-2.834)
O4': (5.204,-7.326,-2.661)
C5': (3.120,-6.038,-2.702)
P: (3.283,-3.461,-2.262)
C4': (3.965,-7.056,-1.958)
C2': (5.809,-5.963,-0.789)
O2': (6.650,-6.123,0.348)
N1: (7.088,-5.948,-3.061)
O4: (9.239,-4.159,-5.963)
O2: (7.964,-7.932,-3.786)
C6: (7.010,-4.564,-3.206)
C5: (7.693,-3.891,-4.159)
O3': (4.423,-7.701,0.291)
C4: (6.562,-3.693,-9.314)
N3: (5.289,-3.624,-9.858)
OP1: (5.946,-0.270,-1.949)
OP2: (7.830,-0.607,-3.693)
C2: (4.161,-3.179,-9.215)
C1': (3.164,-2.260,-7.140)
C3': (3.310,-2.589,-4.774)
O5': (5.421,-0.676,-4.356)
O4': (3.531,-1.052,-6.510)
C5': (4.064,-0.186,-4.340)
P: (6.486,-0.074,-3.323)
C4': (3.153,-1.113,-5.116)
C2': (2.764,-3.250,-6.048)
O2': (1.353,-3.438,-6.026)
N1: (4.350,-2.757,-7.914)
O4: (7.485,-4.145,-10.002)
O2: (3.088,-3.149,-9.768)
C6: (5.600,-2.801,-7.313)
C5: (6.691,-3.247,-7.947)
O3': (2.561,-2.906,-3.583)
N3: (5.289,-3.624,-9.858)
OP1: (5.946,-0.270,-1.949)
OP2: (7.830,-0.607,-3.693)
C2: (4.161,-3.179,-9.215)
C1': (3.164,-2.260,-7.140)
C3': (3.310,-2.589,-4.774)
O5': (5.421,-0.676,-4.356)
O4': (3.531,-1.052,-6.510)
C5': (4.064,-0.186,-4.340)
P: (6.486,-0.074,-3.323)
C4': (3.153,-1.113,-5.116)
C2': (2.764,-3.250,-6.048)
O2': (1.353,-3.438,-6.026)
N1: (4.350,-2.757,-7.914)
O4: (7.485,-4.145,-10.002)
O2: (3.088,-3.149,-9.768)
C6: (5.600,-2.801,-7.313)
C5: (6.691,-3.247,-7.947)
O3': (2.561,-2.906,-3.583)
Image (generated by PyMOL):