Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQM:059:061
Extra
PDB:
ATOM 1 O3' U A 58 55.385 163.403 27.017 1.00 50.33 O
ATOM 2 P A A 59 54.597 163.832 28.350 1.00 51.85 P
ATOM 3 OP1 A A 59 53.252 164.333 27.973 1.00 50.50 O
ATOM 4 OP2 A A 59 55.494 164.691 29.160 1.00 51.46 O
ATOM 5 O5' A A 59 54.368 162.444 29.100 1.00 53.55 O
ATOM 6 C5' A A 59 55.474 161.585 29.336 1.00 52.00 C
ATOM 7 C4' A A 59 55.108 160.435 30.235 1.00 49.95 C
ATOM 8 O4' A A 59 56.401 159.921 30.652 1.00 50.51 O
ATOM 9 C3' A A 59 54.352 160.750 31.533 1.00 49.47 C
ATOM 10 O3' A A 59 52.973 160.382 31.441 1.00 47.39 O
ATOM 11 C2' A A 59 55.083 159.900 32.563 1.00 49.85 C
ATOM 12 O2' A A 59 54.697 158.547 32.511 1.00 47.91 O
ATOM 13 C1' A A 59 56.515 160.001 32.052 1.00 50.86 C
ATOM 14 N9 A A 59 57.169 161.267 32.401 1.00 51.68 N
ATOM 15 C8 A A 59 56.849 162.544 31.997 1.00 49.28 C
ATOM 16 N7 A A 59 57.591 163.473 32.547 1.00 50.38 N
ATOM 17 C5 A A 59 58.469 162.764 33.358 1.00 51.07 C
ATOM 18 C6 A A 59 59.498 163.170 34.225 1.00 50.40 C
ATOM 19 N6 A A 59 59.824 164.444 34.445 1.00 47.61 N
ATOM 20 N1 A A 59 60.187 162.207 34.875 1.00 52.50 N
ATOM 21 C2 A A 59 59.853 160.930 34.672 1.00 50.43 C
ATOM 22 N3 A A 59 58.902 160.424 33.895 1.00 51.67 N
ATOM 23 C4 A A 59 58.235 161.404 33.259 1.00 51.82 C
ATOM 24 P A A 60 51.949 160.703 32.653 1.00 49.25 P
ATOM 25 OP1 A A 60 51.205 161.957 32.367 1.00 48.59 O
ATOM 26 OP2 A A 60 52.637 160.560 33.955 1.00 49.71 O
ATOM 27 O5' A A 60 50.910 159.501 32.557 1.00 48.02 O
TER
ATOM 1 O3' A B 60 46.578 157.571 32.121 1.00 55.74 O
ATOM 2 P G B 61 45.730 157.948 30.813 1.00 61.76 P
ATOM 3 OP1 G B 61 44.500 158.688 31.219 1.00 58.84 O
ATOM 4 OP2 G B 61 45.615 156.695 30.016 1.00 62.18 O
ATOM 5 O5' G B 61 46.659 158.974 30.032 1.00 59.98 O
ATOM 6 C5' G B 61 47.184 158.662 28.739 1.00 58.90 C
ATOM 7 C4' G B 61 48.508 159.348 28.557 1.00 57.75 C
ATOM 8 O4' G B 61 49.547 158.614 29.261 1.00 55.99 O
ATOM 9 C3' G B 61 49.013 159.413 27.132 1.00 56.95 C
ATOM 10 O3' G B 61 48.362 160.486 26.456 1.00 58.70 O
ATOM 11 C2' G B 61 50.502 159.650 27.350 1.00 56.48 C
ATOM 12 O2' G B 61 50.776 160.981 27.741 1.00 58.28 O
ATOM 13 C1' G B 61 50.772 158.745 28.557 1.00 54.35 C
ATOM 14 N9 G B 61 51.239 157.416 28.177 1.00 51.31 N
ATOM 15 C8 G B 61 50.597 156.214 28.362 1.00 49.99 C
ATOM 16 N7 G B 61 51.269 155.198 27.890 1.00 49.72 N
ATOM 17 C5 G B 61 52.421 155.763 27.364 1.00 48.53 C
ATOM 18 C6 G B 61 53.520 155.161 26.700 1.00 48.99 C
ATOM 19 O6 G B 61 53.696 153.970 26.420 1.00 47.89 O
ATOM 20 N1 G B 61 54.476 156.105 26.340 1.00 49.36 N
ATOM 21 C2 G B 61 54.380 157.454 26.576 1.00 48.65 C
ATOM 22 N2 G B 61 55.401 158.205 26.150 1.00 47.86 N
ATOM 23 N3 G B 61 53.357 158.025 27.184 1.00 48.15 N
ATOM 24 C4 G B 61 52.423 157.129 27.546 1.00 48.83 C
ATOM 25 P C B 62 47.768 160.263 24.976 1.00 58.30 P
ATOM 26 OP1 C B 62 46.888 161.429 24.717 1.00 57.69 O
ATOM 27 OP2 C B 62 47.218 158.890 24.838 1.00 58.50 O
ATOM 28 O5' C B 62 49.051 160.369 24.042 1.00 57.27 O
TER
ATOM 2 P A A 59 54.597 163.832 28.350 1.00 51.85 P
ATOM 3 OP1 A A 59 53.252 164.333 27.973 1.00 50.50 O
ATOM 4 OP2 A A 59 55.494 164.691 29.160 1.00 51.46 O
ATOM 5 O5' A A 59 54.368 162.444 29.100 1.00 53.55 O
ATOM 6 C5' A A 59 55.474 161.585 29.336 1.00 52.00 C
ATOM 7 C4' A A 59 55.108 160.435 30.235 1.00 49.95 C
ATOM 8 O4' A A 59 56.401 159.921 30.652 1.00 50.51 O
ATOM 9 C3' A A 59 54.352 160.750 31.533 1.00 49.47 C
ATOM 10 O3' A A 59 52.973 160.382 31.441 1.00 47.39 O
ATOM 11 C2' A A 59 55.083 159.900 32.563 1.00 49.85 C
ATOM 12 O2' A A 59 54.697 158.547 32.511 1.00 47.91 O
ATOM 13 C1' A A 59 56.515 160.001 32.052 1.00 50.86 C
ATOM 14 N9 A A 59 57.169 161.267 32.401 1.00 51.68 N
ATOM 15 C8 A A 59 56.849 162.544 31.997 1.00 49.28 C
ATOM 16 N7 A A 59 57.591 163.473 32.547 1.00 50.38 N
ATOM 17 C5 A A 59 58.469 162.764 33.358 1.00 51.07 C
ATOM 18 C6 A A 59 59.498 163.170 34.225 1.00 50.40 C
ATOM 19 N6 A A 59 59.824 164.444 34.445 1.00 47.61 N
ATOM 20 N1 A A 59 60.187 162.207 34.875 1.00 52.50 N
ATOM 21 C2 A A 59 59.853 160.930 34.672 1.00 50.43 C
ATOM 22 N3 A A 59 58.902 160.424 33.895 1.00 51.67 N
ATOM 23 C4 A A 59 58.235 161.404 33.259 1.00 51.82 C
ATOM 24 P A A 60 51.949 160.703 32.653 1.00 49.25 P
ATOM 25 OP1 A A 60 51.205 161.957 32.367 1.00 48.59 O
ATOM 26 OP2 A A 60 52.637 160.560 33.955 1.00 49.71 O
ATOM 27 O5' A A 60 50.910 159.501 32.557 1.00 48.02 O
TER
ATOM 1 O3' A B 60 46.578 157.571 32.121 1.00 55.74 O
ATOM 2 P G B 61 45.730 157.948 30.813 1.00 61.76 P
ATOM 3 OP1 G B 61 44.500 158.688 31.219 1.00 58.84 O
ATOM 4 OP2 G B 61 45.615 156.695 30.016 1.00 62.18 O
ATOM 5 O5' G B 61 46.659 158.974 30.032 1.00 59.98 O
ATOM 6 C5' G B 61 47.184 158.662 28.739 1.00 58.90 C
ATOM 7 C4' G B 61 48.508 159.348 28.557 1.00 57.75 C
ATOM 8 O4' G B 61 49.547 158.614 29.261 1.00 55.99 O
ATOM 9 C3' G B 61 49.013 159.413 27.132 1.00 56.95 C
ATOM 10 O3' G B 61 48.362 160.486 26.456 1.00 58.70 O
ATOM 11 C2' G B 61 50.502 159.650 27.350 1.00 56.48 C
ATOM 12 O2' G B 61 50.776 160.981 27.741 1.00 58.28 O
ATOM 13 C1' G B 61 50.772 158.745 28.557 1.00 54.35 C
ATOM 14 N9 G B 61 51.239 157.416 28.177 1.00 51.31 N
ATOM 15 C8 G B 61 50.597 156.214 28.362 1.00 49.99 C
ATOM 16 N7 G B 61 51.269 155.198 27.890 1.00 49.72 N
ATOM 17 C5 G B 61 52.421 155.763 27.364 1.00 48.53 C
ATOM 18 C6 G B 61 53.520 155.161 26.700 1.00 48.99 C
ATOM 19 O6 G B 61 53.696 153.970 26.420 1.00 47.89 O
ATOM 20 N1 G B 61 54.476 156.105 26.340 1.00 49.36 N
ATOM 21 C2 G B 61 54.380 157.454 26.576 1.00 48.65 C
ATOM 22 N2 G B 61 55.401 158.205 26.150 1.00 47.86 N
ATOM 23 N3 G B 61 53.357 158.025 27.184 1.00 48.15 N
ATOM 24 C4 G B 61 52.423 157.129 27.546 1.00 48.83 C
ATOM 25 P C B 62 47.768 160.263 24.976 1.00 58.30 P
ATOM 26 OP1 C B 62 46.888 161.429 24.717 1.00 57.69 O
ATOM 27 OP2 C B 62 47.218 158.890 24.838 1.00 58.50 O
ATOM 28 O5' C B 62 49.051 160.369 24.042 1.00 57.27 O
TER
Atoms:
OP1: (53.252,164.333,27.973)
OP2: (55.494,164.691,29.160)
C3': (54.352,160.750,31.533)
C1': (56.515,160.001,32.052)
C5': (55.474,161.585,29.336)
O4': (56.401,159.921,30.652)
C8: (56.849,162.544,31.997)
O2': (54.697,158.547,32.511)
C6: (59.498,163.170,34.225)
C5: (58.469,162.764,33.358)
C4: (58.235,161.404,33.259)
P: (54.597,163.832,28.350)
C4': (55.108,160.435,30.235)
C2': (55.083,159.900,32.563)
C2: (59.853,160.930,34.672)
N1: (60.187,162.207,34.875)
N3: (58.902,160.424,33.895)
N6: (59.824,164.444,34.445)
N7: (57.591,163.473,32.547)
N9: (57.169,161.267,32.401)
O5': (54.368,162.444,29.100)
O3': (52.973,160.382,31.441)
OP2: (55.494,164.691,29.160)
C3': (54.352,160.750,31.533)
C1': (56.515,160.001,32.052)
C5': (55.474,161.585,29.336)
O4': (56.401,159.921,30.652)
C8: (56.849,162.544,31.997)
O2': (54.697,158.547,32.511)
C6: (59.498,163.170,34.225)
C5: (58.469,162.764,33.358)
C4: (58.235,161.404,33.259)
P: (54.597,163.832,28.350)
C4': (55.108,160.435,30.235)
C2': (55.083,159.900,32.563)
C2: (59.853,160.930,34.672)
N1: (60.187,162.207,34.875)
N3: (58.902,160.424,33.895)
N6: (59.824,164.444,34.445)
N7: (57.591,163.473,32.547)
N9: (57.169,161.267,32.401)
O5': (54.368,162.444,29.100)
O3': (52.973,160.382,31.441)
OP1: (44.500,158.688,31.219)
OP2: (45.615,156.695,30.016)
C3': (49.013,159.413,27.132)
C1': (50.772,158.745,28.557)
C5': (47.184,158.662,28.739)
O6: (53.696,153.970,26.420)
O4': (49.547,158.614,29.261)
C8: (50.597,156.214,28.362)
C2: (54.380,157.454,26.576)
C6: (53.520,155.161,26.700)
C5: (52.421,155.763,27.364)
C4: (52.423,157.129,27.546)
P: (45.730,157.948,30.813)
C4': (48.508,159.348,28.557)
C2': (50.502,159.650,27.350)
O2': (50.776,160.981,27.741)
N1: (54.476,156.105,26.340)
N2: (55.401,158.205,26.150)
N3: (53.357,158.025,27.184)
N7: (51.269,155.198,27.890)
N9: (51.239,157.416,28.177)
O5': (46.659,158.974,30.032)
O3': (48.362,160.486,26.456)
OP2: (45.615,156.695,30.016)
C3': (49.013,159.413,27.132)
C1': (50.772,158.745,28.557)
C5': (47.184,158.662,28.739)
O6: (53.696,153.970,26.420)
O4': (49.547,158.614,29.261)
C8: (50.597,156.214,28.362)
C2: (54.380,157.454,26.576)
C6: (53.520,155.161,26.700)
C5: (52.421,155.763,27.364)
C4: (52.423,157.129,27.546)
P: (45.730,157.948,30.813)
C4': (48.508,159.348,28.557)
C2': (50.502,159.650,27.350)
O2': (50.776,160.981,27.741)
N1: (54.476,156.105,26.340)
N2: (55.401,158.205,26.150)
N3: (53.357,158.025,27.184)
N7: (51.269,155.198,27.890)
N9: (51.239,157.416,28.177)
O5': (46.659,158.974,30.032)
O3': (48.362,160.486,26.456)
Image (generated by PyMOL):