Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YI2:059:061
Extra
PDB:
ATOM 1 O3' U A 58 56.264 164.147 26.937 1.00 50.73 O
ATOM 2 P A A 59 55.479 164.503 28.294 1.00 52.09 P
ATOM 3 OP1 A A 59 54.164 165.086 27.938 1.00 52.54 O
ATOM 4 OP2 A A 59 56.398 165.270 29.187 1.00 51.12 O
ATOM 5 O5' A A 59 55.182 163.069 28.922 1.00 51.39 O
ATOM 6 C5' A A 59 56.254 162.167 29.148 1.00 50.73 C
ATOM 7 C4' A A 59 55.855 161.052 30.080 1.00 49.36 C
ATOM 8 O4' A A 59 57.125 160.513 30.535 1.00 50.03 O
ATOM 9 C3' A A 59 55.083 161.422 31.354 1.00 48.00 C
ATOM 10 O3' A A 59 53.693 161.091 31.241 1.00 47.78 O
ATOM 11 C2' A A 59 55.764 160.570 32.413 1.00 49.32 C
ATOM 12 O2' A A 59 55.320 159.231 32.363 1.00 47.74 O
ATOM 13 C1' A A 59 57.212 160.623 31.936 1.00 51.20 C
ATOM 14 N9 A A 59 57.907 161.876 32.267 1.00 52.47 N
ATOM 15 C8 A A 59 57.686 163.139 31.769 1.00 50.68 C
ATOM 16 N7 A A 59 58.451 164.059 32.302 1.00 51.57 N
ATOM 17 C5 A A 59 59.235 163.360 33.210 1.00 51.51 C
ATOM 18 C6 A A 59 60.237 163.767 34.108 1.00 50.58 C
ATOM 19 N6 A A 59 60.626 165.031 34.268 1.00 49.05 N
ATOM 20 N1 A A 59 60.830 162.816 34.857 1.00 51.84 N
ATOM 21 C2 A A 59 60.428 161.552 34.724 1.00 52.45 C
ATOM 22 N3 A A 59 59.490 161.046 33.932 1.00 53.42 N
ATOM 23 C4 A A 59 58.923 162.013 33.188 1.00 53.15 C
ATOM 24 P A A 60 52.677 161.362 32.473 1.00 46.64 P
ATOM 25 OP1 A A 60 51.981 162.657 32.264 1.00 49.80 O
ATOM 26 OP2 A A 60 53.386 161.133 33.743 1.00 48.88 O
ATOM 27 O5' A A 60 51.587 160.207 32.317 1.00 48.38 O
TER
ATOM 1 O3' A B 60 47.168 158.301 32.129 1.00 58.36 O
ATOM 2 P G B 61 46.668 158.500 30.617 1.00 61.29 P
ATOM 3 OP1 G B 61 45.997 159.831 30.511 1.00 60.20 O
ATOM 4 OP2 G B 61 45.931 157.264 30.214 1.00 60.83 O
ATOM 5 O5' G B 61 48.036 158.555 29.809 1.00 59.91 O
ATOM 6 C5' G B 61 48.104 159.100 28.492 1.00 58.16 C
ATOM 7 C4' G B 61 49.302 160.001 28.386 1.00 57.62 C
ATOM 8 O4' G B 61 50.401 159.430 29.142 1.00 55.79 O
ATOM 9 C3' G B 61 49.840 160.196 26.979 1.00 58.16 C
ATOM 10 O3' G B 61 49.116 161.229 26.294 1.00 59.10 O
ATOM 11 C2' G B 61 51.303 160.529 27.253 1.00 56.68 C
ATOM 12 O2' G B 61 51.456 161.854 27.725 1.00 58.90 O
ATOM 13 C1' G B 61 51.608 159.590 28.424 1.00 53.70 C
ATOM 14 N9 G B 61 52.074 158.257 28.053 1.00 50.45 N
ATOM 15 C8 G B 61 51.412 157.071 28.264 1.00 48.61 C
ATOM 16 N7 G B 61 52.075 156.031 27.841 1.00 47.50 N
ATOM 17 C5 G B 61 53.244 156.559 27.315 1.00 49.00 C
ATOM 18 C6 G B 61 54.352 155.913 26.712 1.00 49.65 C
ATOM 19 O6 G B 61 54.522 154.707 26.506 1.00 52.48 O
ATOM 20 N1 G B 61 55.328 156.820 26.332 1.00 49.54 N
ATOM 21 C2 G B 61 55.252 158.178 26.504 1.00 50.66 C
ATOM 22 N2 G B 61 56.309 158.887 26.075 1.00 50.11 N
ATOM 23 N3 G B 61 54.221 158.797 27.057 1.00 50.90 N
ATOM 24 C4 G B 61 53.260 157.932 27.438 1.00 49.64 C
ATOM 25 P C B 62 48.614 160.992 24.776 1.00 59.53 P
ATOM 26 OP1 C B 62 47.744 162.143 24.428 1.00 58.54 O
ATOM 27 OP2 C B 62 48.092 159.609 24.612 1.00 58.16 O
ATOM 28 O5' C B 62 49.949 161.105 23.918 1.00 58.58 O
TER
ATOM 2 P A A 59 55.479 164.503 28.294 1.00 52.09 P
ATOM 3 OP1 A A 59 54.164 165.086 27.938 1.00 52.54 O
ATOM 4 OP2 A A 59 56.398 165.270 29.187 1.00 51.12 O
ATOM 5 O5' A A 59 55.182 163.069 28.922 1.00 51.39 O
ATOM 6 C5' A A 59 56.254 162.167 29.148 1.00 50.73 C
ATOM 7 C4' A A 59 55.855 161.052 30.080 1.00 49.36 C
ATOM 8 O4' A A 59 57.125 160.513 30.535 1.00 50.03 O
ATOM 9 C3' A A 59 55.083 161.422 31.354 1.00 48.00 C
ATOM 10 O3' A A 59 53.693 161.091 31.241 1.00 47.78 O
ATOM 11 C2' A A 59 55.764 160.570 32.413 1.00 49.32 C
ATOM 12 O2' A A 59 55.320 159.231 32.363 1.00 47.74 O
ATOM 13 C1' A A 59 57.212 160.623 31.936 1.00 51.20 C
ATOM 14 N9 A A 59 57.907 161.876 32.267 1.00 52.47 N
ATOM 15 C8 A A 59 57.686 163.139 31.769 1.00 50.68 C
ATOM 16 N7 A A 59 58.451 164.059 32.302 1.00 51.57 N
ATOM 17 C5 A A 59 59.235 163.360 33.210 1.00 51.51 C
ATOM 18 C6 A A 59 60.237 163.767 34.108 1.00 50.58 C
ATOM 19 N6 A A 59 60.626 165.031 34.268 1.00 49.05 N
ATOM 20 N1 A A 59 60.830 162.816 34.857 1.00 51.84 N
ATOM 21 C2 A A 59 60.428 161.552 34.724 1.00 52.45 C
ATOM 22 N3 A A 59 59.490 161.046 33.932 1.00 53.42 N
ATOM 23 C4 A A 59 58.923 162.013 33.188 1.00 53.15 C
ATOM 24 P A A 60 52.677 161.362 32.473 1.00 46.64 P
ATOM 25 OP1 A A 60 51.981 162.657 32.264 1.00 49.80 O
ATOM 26 OP2 A A 60 53.386 161.133 33.743 1.00 48.88 O
ATOM 27 O5' A A 60 51.587 160.207 32.317 1.00 48.38 O
TER
ATOM 1 O3' A B 60 47.168 158.301 32.129 1.00 58.36 O
ATOM 2 P G B 61 46.668 158.500 30.617 1.00 61.29 P
ATOM 3 OP1 G B 61 45.997 159.831 30.511 1.00 60.20 O
ATOM 4 OP2 G B 61 45.931 157.264 30.214 1.00 60.83 O
ATOM 5 O5' G B 61 48.036 158.555 29.809 1.00 59.91 O
ATOM 6 C5' G B 61 48.104 159.100 28.492 1.00 58.16 C
ATOM 7 C4' G B 61 49.302 160.001 28.386 1.00 57.62 C
ATOM 8 O4' G B 61 50.401 159.430 29.142 1.00 55.79 O
ATOM 9 C3' G B 61 49.840 160.196 26.979 1.00 58.16 C
ATOM 10 O3' G B 61 49.116 161.229 26.294 1.00 59.10 O
ATOM 11 C2' G B 61 51.303 160.529 27.253 1.00 56.68 C
ATOM 12 O2' G B 61 51.456 161.854 27.725 1.00 58.90 O
ATOM 13 C1' G B 61 51.608 159.590 28.424 1.00 53.70 C
ATOM 14 N9 G B 61 52.074 158.257 28.053 1.00 50.45 N
ATOM 15 C8 G B 61 51.412 157.071 28.264 1.00 48.61 C
ATOM 16 N7 G B 61 52.075 156.031 27.841 1.00 47.50 N
ATOM 17 C5 G B 61 53.244 156.559 27.315 1.00 49.00 C
ATOM 18 C6 G B 61 54.352 155.913 26.712 1.00 49.65 C
ATOM 19 O6 G B 61 54.522 154.707 26.506 1.00 52.48 O
ATOM 20 N1 G B 61 55.328 156.820 26.332 1.00 49.54 N
ATOM 21 C2 G B 61 55.252 158.178 26.504 1.00 50.66 C
ATOM 22 N2 G B 61 56.309 158.887 26.075 1.00 50.11 N
ATOM 23 N3 G B 61 54.221 158.797 27.057 1.00 50.90 N
ATOM 24 C4 G B 61 53.260 157.932 27.438 1.00 49.64 C
ATOM 25 P C B 62 48.614 160.992 24.776 1.00 59.53 P
ATOM 26 OP1 C B 62 47.744 162.143 24.428 1.00 58.54 O
ATOM 27 OP2 C B 62 48.092 159.609 24.612 1.00 58.16 O
ATOM 28 O5' C B 62 49.949 161.105 23.918 1.00 58.58 O
TER
Atoms:
OP1: (54.164,165.086,27.938)
OP2: (56.398,165.270,29.187)
C3': (55.083,161.422,31.354)
C1': (57.212,160.623,31.936)
C5': (56.254,162.167,29.148)
O4': (57.125,160.513,30.535)
C8: (57.686,163.139,31.769)
O2': (55.320,159.231,32.363)
C6: (60.237,163.767,34.108)
C5: (59.235,163.360,33.210)
C4: (58.923,162.013,33.188)
P: (55.479,164.503,28.294)
C4': (55.855,161.052,30.080)
C2': (55.764,160.570,32.413)
C2: (60.428,161.552,34.724)
N1: (60.830,162.816,34.857)
N3: (59.490,161.046,33.932)
N6: (60.626,165.031,34.268)
N7: (58.451,164.059,32.302)
N9: (57.907,161.876,32.267)
O5': (55.182,163.069,28.922)
O3': (53.693,161.091,31.241)
OP2: (56.398,165.270,29.187)
C3': (55.083,161.422,31.354)
C1': (57.212,160.623,31.936)
C5': (56.254,162.167,29.148)
O4': (57.125,160.513,30.535)
C8: (57.686,163.139,31.769)
O2': (55.320,159.231,32.363)
C6: (60.237,163.767,34.108)
C5: (59.235,163.360,33.210)
C4: (58.923,162.013,33.188)
P: (55.479,164.503,28.294)
C4': (55.855,161.052,30.080)
C2': (55.764,160.570,32.413)
C2: (60.428,161.552,34.724)
N1: (60.830,162.816,34.857)
N3: (59.490,161.046,33.932)
N6: (60.626,165.031,34.268)
N7: (58.451,164.059,32.302)
N9: (57.907,161.876,32.267)
O5': (55.182,163.069,28.922)
O3': (53.693,161.091,31.241)
OP1: (45.997,159.831,30.511)
OP2: (45.931,157.264,30.214)
C3': (49.840,160.196,26.979)
C1': (51.608,159.590,28.424)
C5': (48.104,159.100,28.492)
O6: (54.522,154.707,26.506)
O4': (50.401,159.430,29.142)
C8: (51.412,157.071,28.264)
C2: (55.252,158.178,26.504)
C6: (54.352,155.913,26.712)
C5: (53.244,156.559,27.315)
C4: (53.260,157.932,27.438)
P: (46.668,158.500,30.617)
C4': (49.302,160.001,28.386)
C2': (51.303,160.529,27.253)
O2': (51.456,161.854,27.725)
N1: (55.328,156.820,26.332)
N2: (56.309,158.887,26.075)
N3: (54.221,158.797,27.057)
N7: (52.075,156.031,27.841)
N9: (52.074,158.257,28.053)
O5': (48.036,158.555,29.809)
O3': (49.116,161.229,26.294)
OP2: (45.931,157.264,30.214)
C3': (49.840,160.196,26.979)
C1': (51.608,159.590,28.424)
C5': (48.104,159.100,28.492)
O6: (54.522,154.707,26.506)
O4': (50.401,159.430,29.142)
C8: (51.412,157.071,28.264)
C2: (55.252,158.178,26.504)
C6: (54.352,155.913,26.712)
C5: (53.244,156.559,27.315)
C4: (53.260,157.932,27.438)
P: (46.668,158.500,30.617)
C4': (49.302,160.001,28.386)
C2': (51.303,160.529,27.253)
O2': (51.456,161.854,27.725)
N1: (55.328,156.820,26.332)
N2: (56.309,158.887,26.075)
N3: (54.221,158.797,27.057)
N7: (52.075,156.031,27.841)
N9: (52.074,158.257,28.053)
O5': (48.036,158.555,29.809)
O3': (49.116,161.229,26.294)
Image (generated by PyMOL):