Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:059:061
Extra
PDB:
ATOM 1 O3' U A 58 56.256 164.130 26.909 1.00 44.79 O
ATOM 2 P A A 59 55.463 164.469 28.265 1.00 46.17 P
ATOM 3 OP1 A A 59 54.155 165.043 27.884 1.00 48.85 O
ATOM 4 OP2 A A 59 56.354 165.234 29.178 1.00 45.24 O
ATOM 5 O5' A A 59 55.155 163.035 28.886 1.00 45.62 O
ATOM 6 C5' A A 59 56.225 162.153 29.189 1.00 44.63 C
ATOM 7 C4' A A 59 55.783 161.041 30.108 1.00 43.98 C
ATOM 8 O4' A A 59 57.030 160.460 30.574 1.00 44.65 O
ATOM 9 C3' A A 59 55.011 161.426 31.377 1.00 43.38 C
ATOM 10 O3' A A 59 53.610 161.128 31.264 1.00 43.65 O
ATOM 11 C2' A A 59 55.673 160.563 32.439 1.00 44.82 C
ATOM 12 O2' A A 59 55.216 159.230 32.377 1.00 43.93 O
ATOM 13 C1' A A 59 57.122 160.595 31.971 1.00 46.27 C
ATOM 14 N9 A A 59 57.832 161.847 32.269 1.00 48.00 N
ATOM 15 C8 A A 59 57.620 163.098 31.739 1.00 47.45 C
ATOM 16 N7 A A 59 58.423 164.016 32.213 1.00 49.34 N
ATOM 17 C5 A A 59 59.217 163.330 33.122 1.00 49.25 C
ATOM 18 C6 A A 59 60.267 163.739 33.961 1.00 48.38 C
ATOM 19 N6 A A 59 60.710 164.992 34.039 1.00 48.48 N
ATOM 20 N1 A A 59 60.853 162.804 34.732 1.00 49.07 N
ATOM 21 C2 A A 59 60.407 161.551 34.667 1.00 48.97 C
ATOM 22 N3 A A 59 59.430 161.043 33.927 1.00 49.49 N
ATOM 23 C4 A A 59 58.867 161.994 33.165 1.00 49.01 C
ATOM 24 P A A 60 52.613 161.370 32.520 1.00 42.88 P
ATOM 25 OP1 A A 60 51.896 162.654 32.347 1.00 44.37 O
ATOM 26 OP2 A A 60 53.357 161.128 33.768 1.00 44.97 O
ATOM 27 O5' A A 60 51.548 160.193 32.387 1.00 44.18 O
TER
ATOM 1 O3' A B 60 47.185 158.229 32.108 1.00 54.83 O
ATOM 2 P G B 61 46.713 158.450 30.591 1.00 57.62 P
ATOM 3 OP1 G B 61 46.127 159.817 30.464 1.00 56.01 O
ATOM 4 OP2 G B 61 45.907 157.258 30.195 1.00 57.38 O
ATOM 5 O5' G B 61 48.083 158.420 29.788 1.00 54.97 O
ATOM 6 C5' G B 61 48.176 158.952 28.468 1.00 53.06 C
ATOM 7 C4' G B 61 49.322 159.919 28.398 1.00 52.16 C
ATOM 8 O4' G B 61 50.431 159.404 29.178 1.00 49.38 O
ATOM 9 C3' G B 61 49.873 160.168 27.004 1.00 52.60 C
ATOM 10 O3' G B 61 49.136 161.196 26.326 1.00 53.34 O
ATOM 11 C2' G B 61 51.326 160.517 27.303 1.00 51.00 C
ATOM 12 O2' G B 61 51.458 161.831 27.809 1.00 52.59 O
ATOM 13 C1' G B 61 51.631 159.549 28.450 1.00 48.19 C
ATOM 14 N9 G B 61 52.061 158.212 28.049 1.00 45.44 N
ATOM 15 C8 G B 61 51.374 157.037 28.245 1.00 44.92 C
ATOM 16 N7 G B 61 52.011 155.989 27.802 1.00 44.09 N
ATOM 17 C5 G B 61 53.190 156.499 27.279 1.00 44.25 C
ATOM 18 C6 G B 61 54.284 155.838 26.667 1.00 44.64 C
ATOM 19 O6 G B 61 54.440 154.628 26.463 1.00 45.98 O
ATOM 20 N1 G B 61 55.269 156.734 26.280 1.00 44.97 N
ATOM 21 C2 G B 61 55.215 158.090 26.459 1.00 46.19 C
ATOM 22 N2 G B 61 56.263 158.785 26.000 1.00 47.62 N
ATOM 23 N3 G B 61 54.207 158.721 27.040 1.00 45.97 N
ATOM 24 C4 G B 61 53.235 157.870 27.420 1.00 44.71 C
ATOM 25 P C B 62 48.581 160.939 24.829 1.00 54.60 P
ATOM 26 OP1 C B 62 47.672 162.061 24.498 1.00 53.69 O
ATOM 27 OP2 C B 62 48.092 159.545 24.700 1.00 53.95 O
ATOM 28 O5' C B 62 49.877 161.065 23.915 1.00 53.75 O
TER
ATOM 2 P A A 59 55.463 164.469 28.265 1.00 46.17 P
ATOM 3 OP1 A A 59 54.155 165.043 27.884 1.00 48.85 O
ATOM 4 OP2 A A 59 56.354 165.234 29.178 1.00 45.24 O
ATOM 5 O5' A A 59 55.155 163.035 28.886 1.00 45.62 O
ATOM 6 C5' A A 59 56.225 162.153 29.189 1.00 44.63 C
ATOM 7 C4' A A 59 55.783 161.041 30.108 1.00 43.98 C
ATOM 8 O4' A A 59 57.030 160.460 30.574 1.00 44.65 O
ATOM 9 C3' A A 59 55.011 161.426 31.377 1.00 43.38 C
ATOM 10 O3' A A 59 53.610 161.128 31.264 1.00 43.65 O
ATOM 11 C2' A A 59 55.673 160.563 32.439 1.00 44.82 C
ATOM 12 O2' A A 59 55.216 159.230 32.377 1.00 43.93 O
ATOM 13 C1' A A 59 57.122 160.595 31.971 1.00 46.27 C
ATOM 14 N9 A A 59 57.832 161.847 32.269 1.00 48.00 N
ATOM 15 C8 A A 59 57.620 163.098 31.739 1.00 47.45 C
ATOM 16 N7 A A 59 58.423 164.016 32.213 1.00 49.34 N
ATOM 17 C5 A A 59 59.217 163.330 33.122 1.00 49.25 C
ATOM 18 C6 A A 59 60.267 163.739 33.961 1.00 48.38 C
ATOM 19 N6 A A 59 60.710 164.992 34.039 1.00 48.48 N
ATOM 20 N1 A A 59 60.853 162.804 34.732 1.00 49.07 N
ATOM 21 C2 A A 59 60.407 161.551 34.667 1.00 48.97 C
ATOM 22 N3 A A 59 59.430 161.043 33.927 1.00 49.49 N
ATOM 23 C4 A A 59 58.867 161.994 33.165 1.00 49.01 C
ATOM 24 P A A 60 52.613 161.370 32.520 1.00 42.88 P
ATOM 25 OP1 A A 60 51.896 162.654 32.347 1.00 44.37 O
ATOM 26 OP2 A A 60 53.357 161.128 33.768 1.00 44.97 O
ATOM 27 O5' A A 60 51.548 160.193 32.387 1.00 44.18 O
TER
ATOM 1 O3' A B 60 47.185 158.229 32.108 1.00 54.83 O
ATOM 2 P G B 61 46.713 158.450 30.591 1.00 57.62 P
ATOM 3 OP1 G B 61 46.127 159.817 30.464 1.00 56.01 O
ATOM 4 OP2 G B 61 45.907 157.258 30.195 1.00 57.38 O
ATOM 5 O5' G B 61 48.083 158.420 29.788 1.00 54.97 O
ATOM 6 C5' G B 61 48.176 158.952 28.468 1.00 53.06 C
ATOM 7 C4' G B 61 49.322 159.919 28.398 1.00 52.16 C
ATOM 8 O4' G B 61 50.431 159.404 29.178 1.00 49.38 O
ATOM 9 C3' G B 61 49.873 160.168 27.004 1.00 52.60 C
ATOM 10 O3' G B 61 49.136 161.196 26.326 1.00 53.34 O
ATOM 11 C2' G B 61 51.326 160.517 27.303 1.00 51.00 C
ATOM 12 O2' G B 61 51.458 161.831 27.809 1.00 52.59 O
ATOM 13 C1' G B 61 51.631 159.549 28.450 1.00 48.19 C
ATOM 14 N9 G B 61 52.061 158.212 28.049 1.00 45.44 N
ATOM 15 C8 G B 61 51.374 157.037 28.245 1.00 44.92 C
ATOM 16 N7 G B 61 52.011 155.989 27.802 1.00 44.09 N
ATOM 17 C5 G B 61 53.190 156.499 27.279 1.00 44.25 C
ATOM 18 C6 G B 61 54.284 155.838 26.667 1.00 44.64 C
ATOM 19 O6 G B 61 54.440 154.628 26.463 1.00 45.98 O
ATOM 20 N1 G B 61 55.269 156.734 26.280 1.00 44.97 N
ATOM 21 C2 G B 61 55.215 158.090 26.459 1.00 46.19 C
ATOM 22 N2 G B 61 56.263 158.785 26.000 1.00 47.62 N
ATOM 23 N3 G B 61 54.207 158.721 27.040 1.00 45.97 N
ATOM 24 C4 G B 61 53.235 157.870 27.420 1.00 44.71 C
ATOM 25 P C B 62 48.581 160.939 24.829 1.00 54.60 P
ATOM 26 OP1 C B 62 47.672 162.061 24.498 1.00 53.69 O
ATOM 27 OP2 C B 62 48.092 159.545 24.700 1.00 53.95 O
ATOM 28 O5' C B 62 49.877 161.065 23.915 1.00 53.75 O
TER
Atoms:
OP1: (54.155,165.043,27.884)
OP2: (56.354,165.234,29.178)
C3': (55.011,161.426,31.377)
C1': (57.122,160.595,31.971)
C5': (56.225,162.153,29.189)
O4': (57.030,160.460,30.574)
C8: (57.620,163.098,31.739)
O2': (55.216,159.230,32.377)
C6: (60.267,163.739,33.961)
C5: (59.217,163.330,33.122)
C4: (58.867,161.994,33.165)
P: (55.463,164.469,28.265)
C4': (55.783,161.041,30.108)
C2': (55.673,160.563,32.439)
C2: (60.407,161.551,34.667)
N1: (60.853,162.804,34.732)
N3: (59.430,161.043,33.927)
N6: (60.710,164.992,34.039)
N7: (58.423,164.016,32.213)
N9: (57.832,161.847,32.269)
O5': (55.155,163.035,28.886)
O3': (53.610,161.128,31.264)
OP2: (56.354,165.234,29.178)
C3': (55.011,161.426,31.377)
C1': (57.122,160.595,31.971)
C5': (56.225,162.153,29.189)
O4': (57.030,160.460,30.574)
C8: (57.620,163.098,31.739)
O2': (55.216,159.230,32.377)
C6: (60.267,163.739,33.961)
C5: (59.217,163.330,33.122)
C4: (58.867,161.994,33.165)
P: (55.463,164.469,28.265)
C4': (55.783,161.041,30.108)
C2': (55.673,160.563,32.439)
C2: (60.407,161.551,34.667)
N1: (60.853,162.804,34.732)
N3: (59.430,161.043,33.927)
N6: (60.710,164.992,34.039)
N7: (58.423,164.016,32.213)
N9: (57.832,161.847,32.269)
O5': (55.155,163.035,28.886)
O3': (53.610,161.128,31.264)
OP1: (46.127,159.817,30.464)
OP2: (45.907,157.258,30.195)
C3': (49.873,160.168,27.004)
C1': (51.631,159.549,28.450)
C5': (48.176,158.952,28.468)
O6: (54.440,154.628,26.463)
O4': (50.431,159.404,29.178)
C8: (51.374,157.037,28.245)
C2: (55.215,158.090,26.459)
C6: (54.284,155.838,26.667)
C5: (53.190,156.499,27.279)
C4: (53.235,157.870,27.420)
P: (46.713,158.450,30.591)
C4': (49.322,159.919,28.398)
C2': (51.326,160.517,27.303)
O2': (51.458,161.831,27.809)
N1: (55.269,156.734,26.280)
N2: (56.263,158.785,26.000)
N3: (54.207,158.721,27.040)
N7: (52.011,155.989,27.802)
N9: (52.061,158.212,28.049)
O5': (48.083,158.420,29.788)
O3': (49.136,161.196,26.326)
OP2: (45.907,157.258,30.195)
C3': (49.873,160.168,27.004)
C1': (51.631,159.549,28.450)
C5': (48.176,158.952,28.468)
O6: (54.440,154.628,26.463)
O4': (50.431,159.404,29.178)
C8: (51.374,157.037,28.245)
C2: (55.215,158.090,26.459)
C6: (54.284,155.838,26.667)
C5: (53.190,156.499,27.279)
C4: (53.235,157.870,27.420)
P: (46.713,158.450,30.591)
C4': (49.322,159.919,28.398)
C2': (51.326,160.517,27.303)
O2': (51.458,161.831,27.809)
N1: (55.269,156.734,26.280)
N2: (56.263,158.785,26.000)
N3: (54.207,158.721,27.040)
N7: (52.011,155.989,27.802)
N9: (52.061,158.212,28.049)
O5': (48.083,158.420,29.788)
O3': (49.136,161.196,26.326)
Image (generated by PyMOL):