ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJN:059:061

Extra

PDB:
ATOM 1 O3' U A 58 56.232 164.278 26.890 1.00 49.25 O
ATOM 2 P A A 59 55.446 164.647 28.239 1.00 51.45 P
ATOM 3 OP1 A A 59 54.135 165.200 27.823 1.00 52.67 O
ATOM 4 OP2 A A 59 56.334 165.451 29.131 1.00 50.10 O
ATOM 5 O5' A A 59 55.145 163.229 28.898 1.00 50.76 O
ATOM 6 C5' A A 59 56.210 162.336 29.182 1.00 50.69 C
ATOM 7 C4' A A 59 55.775 161.248 30.134 1.00 51.59 C
ATOM 8 O4' A A 59 57.020 160.684 30.626 1.00 53.06 O
ATOM 9 C3' A A 59 54.984 161.664 31.383 1.00 50.23 C
ATOM 10 O3' A A 59 53.594 161.310 31.251 1.00 49.76 O
ATOM 11 C2' A A 59 55.661 160.864 32.487 1.00 51.82 C
ATOM 12 O2' A A 59 55.214 159.523 32.481 1.00 51.47 O
ATOM 13 C1' A A 59 57.112 160.884 32.016 1.00 53.94 C
ATOM 14 N9 A A 59 57.842 162.138 32.254 1.00 55.88 N
ATOM 15 C8 A A 59 57.662 163.361 31.649 1.00 55.08 C
ATOM 16 N7 A A 59 58.476 164.291 32.081 1.00 55.75 N
ATOM 17 C5 A A 59 59.244 163.644 33.039 1.00 55.76 C
ATOM 18 C6 A A 59 60.283 164.085 33.872 1.00 55.81 C
ATOM 19 N6 A A 59 60.743 165.335 33.887 1.00 57.06 N
ATOM 20 N1 A A 59 60.842 163.187 34.706 1.00 56.37 N
ATOM 21 C2 A A 59 60.377 161.937 34.702 1.00 56.64 C
ATOM 22 N3 A A 59 59.406 161.402 33.974 1.00 56.41 N
ATOM 23 C4 A A 59 58.871 162.318 33.151 1.00 55.80 C
ATOM 24 P A A 60 52.561 161.512 32.486 1.00 48.00 P
ATOM 25 OP1 A A 60 51.852 162.803 32.328 1.00 48.64 O
ATOM 26 OP2 A A 60 53.243 161.218 33.755 1.00 48.54 O
ATOM 27 O5' A A 60 51.494 160.349 32.278 1.00 49.83 O
TER

ATOM 1 O3' A B 60 47.140 158.388 32.061 1.00 60.87 O
ATOM 2 P G B 61 46.650 158.659 30.560 1.00 64.19 P
ATOM 3 OP1 G B 61 46.149 160.065 30.472 1.00 63.24 O
ATOM 4 OP2 G B 61 45.758 157.527 30.173 1.00 64.36 O
ATOM 5 O5' G B 61 47.999 158.556 29.724 1.00 60.75 O
ATOM 6 C5' G B 61 48.098 159.105 28.410 1.00 57.83 C
ATOM 7 C4' G B 61 49.265 160.051 28.346 1.00 56.83 C
ATOM 8 O4' G B 61 50.369 159.509 29.116 1.00 54.71 O
ATOM 9 C3' G B 61 49.816 160.286 26.951 1.00 57.92 C
ATOM 10 O3' G B 61 49.092 161.316 26.259 1.00 59.32 O
ATOM 11 C2' G B 61 51.276 160.617 27.241 1.00 56.13 C
ATOM 12 O2' G B 61 51.420 161.935 27.733 1.00 57.16 O
ATOM 13 C1' G B 61 51.574 159.649 28.391 1.00 53.66 C
ATOM 14 N9 G B 61 52.015 158.305 28.013 1.00 52.09 N
ATOM 15 C8 G B 61 51.351 157.129 28.270 1.00 51.66 C
ATOM 16 N7 G B 61 51.997 156.073 27.861 1.00 51.11 N
ATOM 17 C5 G B 61 53.155 156.576 27.291 1.00 51.00 C
ATOM 18 C6 G B 61 54.249 155.903 26.688 1.00 51.19 C
ATOM 19 O6 G B 61 54.419 154.683 26.529 1.00 51.02 O
ATOM 20 N1 G B 61 55.211 156.796 26.244 1.00 50.83 N
ATOM 21 C2 G B 61 55.134 158.159 26.354 1.00 51.22 C
ATOM 22 N2 G B 61 56.162 158.850 25.849 1.00 52.15 N
ATOM 23 N3 G B 61 54.124 158.800 26.915 1.00 52.01 N
ATOM 24 C4 G B 61 53.178 157.953 27.362 1.00 51.52 C
ATOM 25 P C B 62 48.591 161.071 24.741 1.00 59.19 P
ATOM 26 OP1 C B 62 47.671 162.182 24.407 1.00 59.38 O
ATOM 27 OP2 C B 62 48.126 159.670 24.572 1.00 58.31 O
ATOM 28 O5' C B 62 49.918 161.235 23.878 1.00 57.37 O
TER

Atoms:
OP1: (54.135,165.200,27.823)
OP2: (56.334,165.451,29.131)
C3': (54.984,161.664,31.383)
C1': (57.112,160.884,32.016)
C5': (56.210,162.336,29.182)
O4': (57.020,160.684,30.626)
C8: (57.662,163.361,31.649)
O2': (55.214,159.523,32.481)
C6: (60.283,164.085,33.872)
C5: (59.244,163.644,33.039)
C4: (58.871,162.318,33.151)
P: (55.446,164.647,28.239)
C4': (55.775,161.248,30.134)
C2': (55.661,160.864,32.487)
C2: (60.377,161.937,34.702)
N1: (60.842,163.187,34.706)
N3: (59.406,161.402,33.974)
N6: (60.743,165.335,33.887)
N7: (58.476,164.291,32.081)
N9: (57.842,162.138,32.254)
O5': (55.145,163.229,28.898)
O3': (53.594,161.310,31.251)
OP1: (46.149,160.065,30.472)
OP2: (45.758,157.527,30.173)
C3': (49.816,160.286,26.951)
C1': (51.574,159.649,28.391)
C5': (48.098,159.105,28.410)
O6: (54.419,154.683,26.529)
O4': (50.369,159.509,29.116)
C8: (51.351,157.129,28.270)
C2: (55.134,158.159,26.354)
C6: (54.249,155.903,26.688)
C5: (53.155,156.576,27.291)
C4: (53.178,157.953,27.362)
P: (46.650,158.659,30.560)
C4': (49.265,160.051,28.346)
C2': (51.276,160.617,27.241)
O2': (51.420,161.935,27.733)
N1: (55.211,156.796,26.244)
N2: (56.162,158.850,25.849)
N3: (54.124,158.800,26.915)
N7: (51.997,156.073,27.861)
N9: (52.015,158.305,28.013)
O5': (47.999,158.556,29.724)
O3': (49.092,161.316,26.259)
Image (generated by PyMOL):
PyMOL image
show in jmol