ClaRNA

Doublet info:

Details

Nucleotide types: UU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3TRA:A58:A57

Extra

PDB:
ATOM 1 O3' U A 57 11.728 11.587 12.752 1.00 13.64 O
ATOM 2 P U A 58 11.771 12.077 14.292 1.00 8.27 P
ATOM 3 OP1 U A 58 12.253 10.968 15.174 1.00 11.36 O
ATOM 4 OP2 U A 58 10.366 12.444 14.561 1.00 13.82 O
ATOM 5 O5' U A 58 12.814 13.280 14.262 1.00 10.28 O
ATOM 6 C5' U A 58 14.122 12.981 13.724 1.00 10.76 C
ATOM 7 C4' U A 58 14.822 14.300 13.455 1.00 10.21 C
ATOM 8 O4' U A 58 14.068 15.069 12.528 1.00 16.06 O
ATOM 9 C3' U A 58 14.972 15.191 14.711 1.00 11.19 C
ATOM 10 O3' U A 58 16.263 15.864 14.651 1.00 8.50 O
ATOM 11 C2' U A 58 13.809 16.157 14.576 1.00 14.92 C
ATOM 12 O2' U A 58 14.068 17.320 15.294 1.00 15.86 O
ATOM 13 C1' U A 58 13.742 16.354 13.081 1.00 10.42 C
ATOM 14 N1 U A 58 12.410 16.823 12.678 1.00 8.80 N
ATOM 15 C2 U A 58 12.343 18.088 12.125 1.00 16.28 C
ATOM 16 O2 U A 58 13.363 18.761 11.975 1.00 25.81 O
ATOM 17 N3 U A 58 11.119 18.557 11.736 1.00 14.46 N
ATOM 18 C4 U A 58 9.980 17.823 11.885 1.00 16.52 C
ATOM 19 O4 U A 58 8.900 18.360 11.482 1.00 16.54 O
ATOM 20 C5 U A 58 10.064 16.524 12.468 1.00 19.38 C
ATOM 21 C6 U A 58 11.276 16.082 12.842 1.00 15.29 C
ATOM 22 P C A 59 17.445 14.960 15.294 1.00 11.90 P
ATOM 23 OP1 C A 59 18.795 15.470 14.920 1.00 14.82 O
ATOM 24 OP2 C A 59 17.155 13.607 14.741 1.00 10.67 O
ATOM 25 O5' C A 59 17.173 15.082 16.849 1.00 15.83 O
TER

ATOM 1 O3' A B 56 7.302 14.538 13.515 1.00 24.40 O
ATOM 2 P U B 57 6.874 13.369 12.498 1.00 27.06 P
ATOM 3 OP1 U B 57 5.710 13.784 11.646 1.00 27.20 O
ATOM 4 OP2 U B 57 6.512 12.240 13.410 1.00 15.20 O
ATOM 5 O5' U B 57 8.165 13.097 11.586 1.00 13.28 O
ATOM 6 C5' U B 57 8.665 11.737 11.646 1.00 16.41 C
ATOM 7 C4' U B 57 10.016 11.682 10.988 1.00 12.15 C
ATOM 8 O4' U B 57 9.950 12.369 9.732 1.00 16.81 O
ATOM 9 C3' U B 57 11.149 12.383 11.736 1.00 13.92 C
ATOM 10 O3' U B 57 11.728 11.587 12.752 1.00 13.64 O
ATOM 11 C2' U B 57 12.138 12.689 10.600 1.00 16.04 C
ATOM 12 O2' U B 57 12.880 11.499 10.375 1.00 11.90 O
ATOM 13 C1' U B 57 11.204 12.995 9.448 1.00 14.73 C
ATOM 14 N1 U B 57 11.065 14.457 9.284 1.00 12.67 N
ATOM 15 C2 U B 57 12.229 15.157 9.000 1.00 16.60 C
ATOM 16 O2 U B 57 13.308 14.579 8.895 1.00 18.50 O
ATOM 17 N3 U B 57 12.138 16.510 8.835 1.00 15.77 N
ATOM 18 C4 U B 57 10.950 17.170 8.940 1.00 22.05 C
ATOM 19 O4 U B 57 10.981 18.428 8.761 1.00 23.51 O
ATOM 20 C5 U B 57 9.763 16.436 9.224 1.00 17.44 C
ATOM 21 C6 U B 57 9.877 15.110 9.389 1.00 15.33 C
ATOM 22 P U B 58 11.771 12.077 14.292 1.00 8.27 P
ATOM 23 OP1 U B 58 12.253 10.968 15.174 1.00 11.36 O
ATOM 24 OP2 U B 58 10.366 12.444 14.561 1.00 13.82 O
ATOM 25 O5' U B 58 12.814 13.280 14.262 1.00 10.28 O
TER

Atoms:
C4: (9.980,17.823,11.885)
N3: (11.119,18.557,11.736)
OP1: (12.253,10.968,15.174)
OP2: (10.366,12.444,14.561)
C2: (12.343,18.088,12.125)
C1': (13.742,16.354,13.081)
C3': (14.972,15.191,14.711)
O5': (12.814,13.280,14.262)
O4': (14.068,15.069,12.528)
C5': (14.122,12.981,13.724)
P: (11.771,12.077,14.292)
C4': (14.822,14.300,13.455)
C2': (13.809,16.157,14.576)
O2': (14.068,17.320,15.294)
N1: (12.410,16.823,12.678)
O4: (8.900,18.360,11.482)
O2: (13.363,18.761,11.975)
C6: (11.276,16.082,12.842)
C5: (10.064,16.524,12.468)
O3': (16.263,15.864,14.651)
C4: (10.950,17.170,8.940)
N3: (12.138,16.510,8.835)
OP1: (5.710,13.784,11.646)
OP2: (6.512,12.240,13.410)
C2: (12.229,15.157,9.000)
C1': (11.204,12.995,9.448)
C3': (11.149,12.383,11.736)
O5': (8.165,13.097,11.586)
O4': (9.950,12.369,9.732)
C5': (8.665,11.737,11.646)
P: (6.874,13.369,12.498)
C4': (10.016,11.682,10.988)
C2': (12.138,12.689,10.600)
O2': (12.880,11.499,10.375)
N1: (11.065,14.457,9.284)
O4: (10.981,18.428,8.761)
O2: (13.308,14.579,8.895)
C6: (9.877,15.110,9.389)
C5: (9.763,16.436,9.224)
O3': (11.728,11.587,12.752)
Image (generated by PyMOL):
PyMOL image
show in jmol