Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:059:061
Extra
PDB:
ATOM 1 O3' U A 58 55.959 164.141 26.912 1.00 38.45 O
ATOM 2 P A A 59 55.222 164.481 28.292 1.00 40.98 P
ATOM 3 OP1 A A 59 53.907 165.093 27.985 1.00 42.66 O
ATOM 4 OP2 A A 59 56.183 165.213 29.161 1.00 40.12 O
ATOM 5 O5' A A 59 54.930 163.043 28.905 1.00 41.77 O
ATOM 6 C5' A A 59 56.008 162.144 29.140 1.00 41.81 C
ATOM 7 C4' A A 59 55.616 161.065 30.115 1.00 41.19 C
ATOM 8 O4' A A 59 56.874 160.534 30.606 1.00 41.15 O
ATOM 9 C3' A A 59 54.837 161.508 31.356 1.00 40.82 C
ATOM 10 O3' A A 59 53.438 161.219 31.230 1.00 40.82 O
ATOM 11 C2' A A 59 55.484 160.693 32.463 1.00 42.21 C
ATOM 12 O2' A A 59 54.984 159.374 32.456 1.00 42.34 O
ATOM 13 C1' A A 59 56.940 160.687 32.007 1.00 44.10 C
ATOM 14 N9 A A 59 57.690 161.916 32.315 1.00 45.62 N
ATOM 15 C8 A A 59 57.529 163.166 31.768 1.00 45.02 C
ATOM 16 N7 A A 59 58.340 164.069 32.260 1.00 45.45 N
ATOM 17 C5 A A 59 59.090 163.371 33.195 1.00 45.32 C
ATOM 18 C6 A A 59 60.124 163.765 34.065 1.00 45.08 C
ATOM 19 N6 A A 59 60.586 165.013 34.154 1.00 43.97 N
ATOM 20 N1 A A 59 60.672 162.822 34.855 1.00 45.50 N
ATOM 21 C2 A A 59 60.203 161.576 34.781 1.00 45.29 C
ATOM 22 N3 A A 59 59.234 161.085 34.018 1.00 46.01 N
ATOM 23 C4 A A 59 58.709 162.044 33.235 1.00 45.77 C
ATOM 24 P A A 60 52.443 161.403 32.495 1.00 40.68 P
ATOM 25 OP1 A A 60 51.719 162.688 32.366 1.00 42.76 O
ATOM 26 OP2 A A 60 53.178 161.116 33.738 1.00 41.19 O
ATOM 27 O5' A A 60 51.373 160.235 32.318 1.00 42.52 O
TER
ATOM 1 O3' A B 60 46.989 158.287 32.139 1.00 50.50 O
ATOM 2 P G B 61 46.502 158.478 30.621 1.00 52.47 P
ATOM 3 OP1 G B 61 45.791 159.786 30.523 1.00 51.72 O
ATOM 4 OP2 G B 61 45.808 157.225 30.206 1.00 53.55 O
ATOM 5 O5' G B 61 47.872 158.574 29.822 1.00 49.63 O
ATOM 6 C5' G B 61 47.931 159.114 28.503 1.00 48.10 C
ATOM 7 C4' G B 61 49.162 159.965 28.370 1.00 47.93 C
ATOM 8 O4' G B 61 50.241 159.337 29.103 1.00 45.57 O
ATOM 9 C3' G B 61 49.686 160.146 26.957 1.00 48.45 C
ATOM 10 O3' G B 61 48.997 161.205 26.281 1.00 50.12 O
ATOM 11 C2' G B 61 51.165 160.421 27.207 1.00 47.05 C
ATOM 12 O2' G B 61 51.402 161.746 27.641 1.00 48.37 O
ATOM 13 C1' G B 61 51.450 159.485 28.388 1.00 45.34 C
ATOM 14 N9 G B 61 51.912 158.149 28.023 1.00 42.92 N
ATOM 15 C8 G B 61 51.253 156.963 28.235 1.00 42.15 C
ATOM 16 N7 G B 61 51.912 155.926 27.801 1.00 42.47 N
ATOM 17 C5 G B 61 53.077 156.458 27.269 1.00 41.57 C
ATOM 18 C6 G B 61 54.179 155.818 26.653 1.00 41.38 C
ATOM 19 O6 G B 61 54.351 154.616 26.436 1.00 41.66 O
ATOM 20 N1 G B 61 55.148 156.731 26.270 1.00 42.38 N
ATOM 21 C2 G B 61 55.069 158.087 26.450 1.00 43.52 C
ATOM 22 N2 G B 61 56.114 158.802 26.010 1.00 44.12 N
ATOM 23 N3 G B 61 54.045 158.698 27.018 1.00 42.98 N
ATOM 24 C4 G B 61 53.093 157.828 27.402 1.00 42.04 C
ATOM 25 P C B 62 48.440 160.981 24.782 1.00 51.23 P
ATOM 26 OP1 C B 62 47.529 162.115 24.487 1.00 50.61 O
ATOM 27 OP2 C B 62 47.944 159.589 24.625 1.00 51.61 O
ATOM 28 O5' C B 62 49.736 161.131 23.871 1.00 49.99 O
TER
ATOM 2 P A A 59 55.222 164.481 28.292 1.00 40.98 P
ATOM 3 OP1 A A 59 53.907 165.093 27.985 1.00 42.66 O
ATOM 4 OP2 A A 59 56.183 165.213 29.161 1.00 40.12 O
ATOM 5 O5' A A 59 54.930 163.043 28.905 1.00 41.77 O
ATOM 6 C5' A A 59 56.008 162.144 29.140 1.00 41.81 C
ATOM 7 C4' A A 59 55.616 161.065 30.115 1.00 41.19 C
ATOM 8 O4' A A 59 56.874 160.534 30.606 1.00 41.15 O
ATOM 9 C3' A A 59 54.837 161.508 31.356 1.00 40.82 C
ATOM 10 O3' A A 59 53.438 161.219 31.230 1.00 40.82 O
ATOM 11 C2' A A 59 55.484 160.693 32.463 1.00 42.21 C
ATOM 12 O2' A A 59 54.984 159.374 32.456 1.00 42.34 O
ATOM 13 C1' A A 59 56.940 160.687 32.007 1.00 44.10 C
ATOM 14 N9 A A 59 57.690 161.916 32.315 1.00 45.62 N
ATOM 15 C8 A A 59 57.529 163.166 31.768 1.00 45.02 C
ATOM 16 N7 A A 59 58.340 164.069 32.260 1.00 45.45 N
ATOM 17 C5 A A 59 59.090 163.371 33.195 1.00 45.32 C
ATOM 18 C6 A A 59 60.124 163.765 34.065 1.00 45.08 C
ATOM 19 N6 A A 59 60.586 165.013 34.154 1.00 43.97 N
ATOM 20 N1 A A 59 60.672 162.822 34.855 1.00 45.50 N
ATOM 21 C2 A A 59 60.203 161.576 34.781 1.00 45.29 C
ATOM 22 N3 A A 59 59.234 161.085 34.018 1.00 46.01 N
ATOM 23 C4 A A 59 58.709 162.044 33.235 1.00 45.77 C
ATOM 24 P A A 60 52.443 161.403 32.495 1.00 40.68 P
ATOM 25 OP1 A A 60 51.719 162.688 32.366 1.00 42.76 O
ATOM 26 OP2 A A 60 53.178 161.116 33.738 1.00 41.19 O
ATOM 27 O5' A A 60 51.373 160.235 32.318 1.00 42.52 O
TER
ATOM 1 O3' A B 60 46.989 158.287 32.139 1.00 50.50 O
ATOM 2 P G B 61 46.502 158.478 30.621 1.00 52.47 P
ATOM 3 OP1 G B 61 45.791 159.786 30.523 1.00 51.72 O
ATOM 4 OP2 G B 61 45.808 157.225 30.206 1.00 53.55 O
ATOM 5 O5' G B 61 47.872 158.574 29.822 1.00 49.63 O
ATOM 6 C5' G B 61 47.931 159.114 28.503 1.00 48.10 C
ATOM 7 C4' G B 61 49.162 159.965 28.370 1.00 47.93 C
ATOM 8 O4' G B 61 50.241 159.337 29.103 1.00 45.57 O
ATOM 9 C3' G B 61 49.686 160.146 26.957 1.00 48.45 C
ATOM 10 O3' G B 61 48.997 161.205 26.281 1.00 50.12 O
ATOM 11 C2' G B 61 51.165 160.421 27.207 1.00 47.05 C
ATOM 12 O2' G B 61 51.402 161.746 27.641 1.00 48.37 O
ATOM 13 C1' G B 61 51.450 159.485 28.388 1.00 45.34 C
ATOM 14 N9 G B 61 51.912 158.149 28.023 1.00 42.92 N
ATOM 15 C8 G B 61 51.253 156.963 28.235 1.00 42.15 C
ATOM 16 N7 G B 61 51.912 155.926 27.801 1.00 42.47 N
ATOM 17 C5 G B 61 53.077 156.458 27.269 1.00 41.57 C
ATOM 18 C6 G B 61 54.179 155.818 26.653 1.00 41.38 C
ATOM 19 O6 G B 61 54.351 154.616 26.436 1.00 41.66 O
ATOM 20 N1 G B 61 55.148 156.731 26.270 1.00 42.38 N
ATOM 21 C2 G B 61 55.069 158.087 26.450 1.00 43.52 C
ATOM 22 N2 G B 61 56.114 158.802 26.010 1.00 44.12 N
ATOM 23 N3 G B 61 54.045 158.698 27.018 1.00 42.98 N
ATOM 24 C4 G B 61 53.093 157.828 27.402 1.00 42.04 C
ATOM 25 P C B 62 48.440 160.981 24.782 1.00 51.23 P
ATOM 26 OP1 C B 62 47.529 162.115 24.487 1.00 50.61 O
ATOM 27 OP2 C B 62 47.944 159.589 24.625 1.00 51.61 O
ATOM 28 O5' C B 62 49.736 161.131 23.871 1.00 49.99 O
TER
Atoms:
OP1: (53.907,165.093,27.985)
OP2: (56.183,165.213,29.161)
C3': (54.837,161.508,31.356)
C1': (56.940,160.687,32.007)
C5': (56.008,162.144,29.140)
O4': (56.874,160.534,30.606)
C8: (57.529,163.166,31.768)
O2': (54.984,159.374,32.456)
C6: (60.124,163.765,34.065)
C5: (59.090,163.371,33.195)
C4: (58.709,162.044,33.235)
P: (55.222,164.481,28.292)
C4': (55.616,161.065,30.115)
C2': (55.484,160.693,32.463)
C2: (60.203,161.576,34.781)
N1: (60.672,162.822,34.855)
N3: (59.234,161.085,34.018)
N6: (60.586,165.013,34.154)
N7: (58.340,164.069,32.260)
N9: (57.690,161.916,32.315)
O5': (54.930,163.043,28.905)
O3': (53.438,161.219,31.230)
OP2: (56.183,165.213,29.161)
C3': (54.837,161.508,31.356)
C1': (56.940,160.687,32.007)
C5': (56.008,162.144,29.140)
O4': (56.874,160.534,30.606)
C8: (57.529,163.166,31.768)
O2': (54.984,159.374,32.456)
C6: (60.124,163.765,34.065)
C5: (59.090,163.371,33.195)
C4: (58.709,162.044,33.235)
P: (55.222,164.481,28.292)
C4': (55.616,161.065,30.115)
C2': (55.484,160.693,32.463)
C2: (60.203,161.576,34.781)
N1: (60.672,162.822,34.855)
N3: (59.234,161.085,34.018)
N6: (60.586,165.013,34.154)
N7: (58.340,164.069,32.260)
N9: (57.690,161.916,32.315)
O5': (54.930,163.043,28.905)
O3': (53.438,161.219,31.230)
OP1: (45.791,159.786,30.523)
OP2: (45.808,157.225,30.206)
C3': (49.686,160.146,26.957)
C1': (51.450,159.485,28.388)
C5': (47.931,159.114,28.503)
O6: (54.351,154.616,26.436)
O4': (50.241,159.337,29.103)
C8: (51.253,156.963,28.235)
C2: (55.069,158.087,26.450)
C6: (54.179,155.818,26.653)
C5: (53.077,156.458,27.269)
C4: (53.093,157.828,27.402)
P: (46.502,158.478,30.621)
C4': (49.162,159.965,28.370)
C2': (51.165,160.421,27.207)
O2': (51.402,161.746,27.641)
N1: (55.148,156.731,26.270)
N2: (56.114,158.802,26.010)
N3: (54.045,158.698,27.018)
N7: (51.912,155.926,27.801)
N9: (51.912,158.149,28.023)
O5': (47.872,158.574,29.822)
O3': (48.997,161.205,26.281)
OP2: (45.808,157.225,30.206)
C3': (49.686,160.146,26.957)
C1': (51.450,159.485,28.388)
C5': (47.931,159.114,28.503)
O6: (54.351,154.616,26.436)
O4': (50.241,159.337,29.103)
C8: (51.253,156.963,28.235)
C2: (55.069,158.087,26.450)
C6: (54.179,155.818,26.653)
C5: (53.077,156.458,27.269)
C4: (53.093,157.828,27.402)
P: (46.502,158.478,30.621)
C4': (49.162,159.965,28.370)
C2': (51.165,160.421,27.207)
O2': (51.402,161.746,27.641)
N1: (55.148,156.731,26.270)
N2: (56.114,158.802,26.010)
N3: (54.045,158.698,27.018)
N7: (51.912,155.926,27.801)
N9: (51.912,158.149,28.023)
O5': (47.872,158.574,29.822)
O3': (48.997,161.205,26.281)
Image (generated by PyMOL):