ClaRNA

Doublet info:

Details

Nucleotide types: UU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5B:2128:2127

Extra

PDB:
ATOM 1 O3' U A 127 -46.912 112.454 79.119 1.00 99.59 O
ATOM 2 P U A 128 -45.821 113.386 78.395 1.00123.19 P
ATOM 3 OP1 U A 128 -45.012 114.016 79.465 1.00123.41 O
ATOM 4 OP2 U A 128 -46.541 114.261 77.439 1.00124.36 O
ATOM 5 O5' U A 128 -44.938 112.333 77.600 1.00121.97 O
ATOM 6 C5' U A 128 -44.230 111.327 78.297 1.00120.76 C
ATOM 7 C4' U A 128 -43.530 110.376 77.362 1.00119.75 C
ATOM 8 O4' U A 128 -44.512 109.661 76.557 1.00119.53 O
ATOM 9 C3' U A 128 -42.540 111.011 76.379 1.00120.08 C
ATOM 10 O3' U A 128 -41.364 110.199 76.313 1.00118.99 O
ATOM 11 C2' U A 128 -43.288 110.947 75.040 1.00120.42 C
ATOM 12 O2' U A 128 -42.452 110.894 73.903 1.00120.24 O
ATOM 13 C1' U A 128 -44.090 109.661 75.210 1.00119.53 C
ATOM 14 N1 U A 128 -45.283 109.545 74.334 1.00119.96 N
ATOM 15 C2 U A 128 -45.134 108.771 73.203 1.00119.38 C
ATOM 16 O2 U A 128 -44.073 108.250 72.932 1.00118.60 O
ATOM 17 N3 U A 128 -46.254 108.657 72.408 1.00119.82 N
ATOM 18 C4 U A 128 -47.492 109.225 72.635 1.00120.76 C
ATOM 19 O4 U A 128 -48.412 109.047 71.838 1.00121.10 O
ATOM 20 C5 U A 128 -47.571 110.001 73.835 1.00121.29 C
ATOM 21 C6 U A 128 -46.495 110.130 74.627 1.00120.89 C
ATOM 22 P C A 129 -39.940 110.824 76.697 1.00126.23 P
ATOM 23 OP1 C A 129 -38.901 109.916 76.174 1.00125.18 O
ATOM 24 OP2 C A 129 -39.962 111.125 78.145 1.00126.38 O
ATOM 25 O5' C A 129 -39.941 112.164 75.873 1.00127.52 O
TER

ATOM 1 O3' G B 126 -52.754 112.245 75.716 1.00108.78 O
ATOM 2 P U B 127 -51.390 111.510 75.296 1.00100.95 P
ATOM 3 OP1 U B 127 -50.795 112.297 74.190 1.00101.57 O
ATOM 4 OP2 U B 127 -51.704 110.081 75.061 1.00 99.83 O
ATOM 5 O5' U B 127 -50.494 111.662 76.603 1.00100.54 O
ATOM 6 C5' U B 127 -49.801 112.879 76.861 1.00101.34 C
ATOM 7 C4' U B 127 -49.108 112.874 78.203 1.00100.92 C
ATOM 8 O4' U B 127 -50.071 112.584 79.245 1.00100.96 O
ATOM 9 C3' U B 127 -47.971 111.859 78.365 1.00 99.52 C
ATOM 10 O3' U B 127 -46.912 112.454 79.119 1.00 99.59 O
ATOM 11 C2' U B 127 -48.619 110.751 79.193 1.00 98.70 C
ATOM 12 O2' U B 127 -47.705 109.983 79.956 1.00 97.61 O
ATOM 13 C1' U B 127 -49.566 111.566 80.076 1.00 99.76 C
ATOM 14 N1 U B 127 -50.710 110.814 80.620 1.00 99.52 N
ATOM 15 C2 U B 127 -50.772 110.694 81.994 1.00 99.37 C
ATOM 16 O2 U B 127 -49.909 111.160 82.722 1.00 99.41 O
ATOM 17 N3 U B 127 -51.859 110.009 82.480 1.00 99.20 N
ATOM 18 C4 U B 127 -52.866 109.442 81.730 1.00 99.17 C
ATOM 19 O4 U B 127 -53.772 108.830 82.294 1.00 99.01 O
ATOM 20 C5 U B 127 -52.733 109.625 80.316 1.00 99.35 C
ATOM 21 C6 U B 127 -51.689 110.295 79.817 1.00 99.52 C
ATOM 22 P U B 128 -45.821 113.386 78.395 1.00123.19 P
ATOM 23 OP1 U B 128 -45.012 114.016 79.465 1.00123.41 O
ATOM 24 OP2 U B 128 -46.541 114.261 77.439 1.00124.36 O
ATOM 25 O5' U B 128 -44.938 112.333 77.600 1.00121.97 O
TER

Atoms:
C4: (-47.492,109.225,72.635)
N3: (-46.254,108.657,72.408)
OP1: (-45.012,114.016,79.465)
OP2: (-46.541,114.261,77.439)
C2: (-45.134,108.771,73.203)
C1': (-44.090,109.661,75.210)
C3': (-42.540,111.011,76.379)
O5': (-44.938,112.333,77.600)
O4': (-44.512,109.661,76.557)
C5': (-44.230,111.327,78.297)
P: (-45.821,113.386,78.395)
C4': (-43.530,110.376,77.362)
C2': (-43.288,110.947,75.040)
O2': (-42.452,110.894,73.903)
N1: (-45.283,109.545,74.334)
O4: (-48.412,109.047,71.838)
O2: (-44.073,108.250,72.932)
C6: (-46.495,110.130,74.627)
C5: (-47.571,110.001,73.835)
O3': (-41.364,110.199,76.313)
C4: (-52.866,109.442,81.730)
N3: (-51.859,110.009,82.480)
OP1: (-50.795,112.297,74.190)
OP2: (-51.704,110.081,75.061)
C2: (-50.772,110.694,81.994)
C1': (-49.566,111.566,80.076)
C3': (-47.971,111.859,78.365)
O5': (-50.494,111.662,76.603)
O4': (-50.071,112.584,79.245)
C5': (-49.801,112.879,76.861)
P: (-51.390,111.510,75.296)
C4': (-49.108,112.874,78.203)
C2': (-48.619,110.751,79.193)
O2': (-47.705,109.983,79.956)
N1: (-50.710,110.814,80.620)
O4: (-53.772,108.830,82.294)
O2: (-49.909,111.160,82.722)
C6: (-51.689,110.295,79.817)
C5: (-52.733,109.625,80.316)
O3': (-46.912,112.454,79.119)
Image (generated by PyMOL):
PyMOL image
show in jmol