Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11456:11455
Extra
PDB:
ATOM 1 O3' U A1455 57.870 49.118 100.820 1.00 53.40 O
ATOM 2 P U A1456 57.070 48.405 101.993 1.00 56.07 P
ATOM 3 OP1 U A1456 56.977 49.381 103.133 1.00 56.72 O
ATOM 4 OP2 U A1456 57.723 47.083 102.217 1.00 55.70 O
ATOM 5 O5' U A1456 55.634 48.208 101.341 1.00 55.73 O
ATOM 6 C5' U A1456 54.545 49.055 101.682 1.00 56.06 C
ATOM 7 C4' U A1456 53.228 48.347 101.500 1.00 55.67 C
ATOM 8 O4' U A1456 53.048 48.017 100.087 1.00 55.19 O
ATOM 9 C3' U A1456 53.092 47.002 102.224 1.00 55.37 C
ATOM 10 O3' U A1456 52.655 47.140 103.553 1.00 55.74 O
ATOM 11 C2' U A1456 52.105 46.258 101.358 1.00 54.83 C
ATOM 12 O2' U A1456 50.796 46.738 101.609 1.00 55.00 O
ATOM 13 C1' U A1456 52.520 46.711 99.962 1.00 54.66 C
ATOM 14 N1 U A1456 53.557 45.812 99.362 1.00 54.25 N
ATOM 15 C2 U A1456 53.146 44.546 98.949 1.00 53.69 C
ATOM 16 O2 U A1456 52.003 44.174 99.084 1.00 53.54 O
ATOM 17 N3 U A1456 54.096 43.698 98.395 1.00 53.33 N
ATOM 18 C4 U A1456 55.425 44.014 98.210 1.00 53.47 C
ATOM 19 O4 U A1456 56.186 43.182 97.699 1.00 53.13 O
ATOM 20 C5 U A1456 55.779 45.336 98.663 1.00 54.05 C
ATOM 21 C6 U A1456 54.876 46.161 99.199 1.00 54.41 C
ATOM 22 P G A1457 52.767 45.916 104.583 1.00 50.73 P
ATOM 23 OP1 G A1457 52.050 46.326 105.819 1.00 51.18 O
ATOM 24 OP2 G A1457 54.197 45.535 104.681 1.00 50.71 O
ATOM 25 O5' G A1457 51.975 44.754 103.859 1.00 50.09 O
TER
ATOM 1 O3' G B1454 58.524 46.962 94.792 1.00 53.25 O
ATOM 2 P U B1455 59.357 46.257 95.959 1.00 51.32 P
ATOM 3 OP1 U B1455 60.762 46.573 95.736 1.00 51.50 O
ATOM 4 OP2 U B1455 58.939 44.822 96.014 1.00 50.81 O
ATOM 5 O5' U B1455 58.831 47.001 97.242 1.00 51.84 O
ATOM 6 C5' U B1455 59.582 47.022 98.429 1.00 52.18 C
ATOM 7 C4' U B1455 59.336 48.288 99.163 1.00 52.80 C
ATOM 8 O4' U B1455 59.704 49.394 98.309 1.00 53.02 O
ATOM 9 C3' U B1455 57.900 48.514 99.546 1.00 52.86 C
ATOM 10 O3' U B1455 57.870 49.118 100.820 1.00 53.40 O
ATOM 11 C2' U B1455 57.385 49.496 98.490 1.00 52.93 C
ATOM 12 O2' U B1455 56.367 50.341 98.944 1.00 53.28 O
ATOM 13 C1' U B1455 58.622 50.290 98.169 1.00 53.24 C
ATOM 14 N1 U B1455 58.654 50.832 96.796 1.00 53.12 N
ATOM 15 C2 U B1455 59.093 52.118 96.588 1.00 53.60 C
ATOM 16 O2 U B1455 59.425 52.847 97.510 1.00 54.13 O
ATOM 17 N3 U B1455 59.148 52.547 95.287 1.00 53.48 N
ATOM 18 C4 U B1455 58.844 51.823 94.182 1.00 52.93 C
ATOM 19 O4 U B1455 58.931 52.307 93.069 1.00 52.89 O
ATOM 20 C5 U B1455 58.443 50.503 94.479 1.00 52.47 C
ATOM 21 C6 U B1455 58.362 50.058 95.735 1.00 52.57 C
ATOM 22 P U B1456 57.070 48.405 101.993 1.00 56.07 P
ATOM 23 OP1 U B1456 56.977 49.381 103.133 1.00 56.72 O
ATOM 24 OP2 U B1456 57.723 47.083 102.217 1.00 55.70 O
ATOM 25 O5' U B1456 55.634 48.208 101.341 1.00 55.73 O
TER
ATOM 2 P U A1456 57.070 48.405 101.993 1.00 56.07 P
ATOM 3 OP1 U A1456 56.977 49.381 103.133 1.00 56.72 O
ATOM 4 OP2 U A1456 57.723 47.083 102.217 1.00 55.70 O
ATOM 5 O5' U A1456 55.634 48.208 101.341 1.00 55.73 O
ATOM 6 C5' U A1456 54.545 49.055 101.682 1.00 56.06 C
ATOM 7 C4' U A1456 53.228 48.347 101.500 1.00 55.67 C
ATOM 8 O4' U A1456 53.048 48.017 100.087 1.00 55.19 O
ATOM 9 C3' U A1456 53.092 47.002 102.224 1.00 55.37 C
ATOM 10 O3' U A1456 52.655 47.140 103.553 1.00 55.74 O
ATOM 11 C2' U A1456 52.105 46.258 101.358 1.00 54.83 C
ATOM 12 O2' U A1456 50.796 46.738 101.609 1.00 55.00 O
ATOM 13 C1' U A1456 52.520 46.711 99.962 1.00 54.66 C
ATOM 14 N1 U A1456 53.557 45.812 99.362 1.00 54.25 N
ATOM 15 C2 U A1456 53.146 44.546 98.949 1.00 53.69 C
ATOM 16 O2 U A1456 52.003 44.174 99.084 1.00 53.54 O
ATOM 17 N3 U A1456 54.096 43.698 98.395 1.00 53.33 N
ATOM 18 C4 U A1456 55.425 44.014 98.210 1.00 53.47 C
ATOM 19 O4 U A1456 56.186 43.182 97.699 1.00 53.13 O
ATOM 20 C5 U A1456 55.779 45.336 98.663 1.00 54.05 C
ATOM 21 C6 U A1456 54.876 46.161 99.199 1.00 54.41 C
ATOM 22 P G A1457 52.767 45.916 104.583 1.00 50.73 P
ATOM 23 OP1 G A1457 52.050 46.326 105.819 1.00 51.18 O
ATOM 24 OP2 G A1457 54.197 45.535 104.681 1.00 50.71 O
ATOM 25 O5' G A1457 51.975 44.754 103.859 1.00 50.09 O
TER
ATOM 1 O3' G B1454 58.524 46.962 94.792 1.00 53.25 O
ATOM 2 P U B1455 59.357 46.257 95.959 1.00 51.32 P
ATOM 3 OP1 U B1455 60.762 46.573 95.736 1.00 51.50 O
ATOM 4 OP2 U B1455 58.939 44.822 96.014 1.00 50.81 O
ATOM 5 O5' U B1455 58.831 47.001 97.242 1.00 51.84 O
ATOM 6 C5' U B1455 59.582 47.022 98.429 1.00 52.18 C
ATOM 7 C4' U B1455 59.336 48.288 99.163 1.00 52.80 C
ATOM 8 O4' U B1455 59.704 49.394 98.309 1.00 53.02 O
ATOM 9 C3' U B1455 57.900 48.514 99.546 1.00 52.86 C
ATOM 10 O3' U B1455 57.870 49.118 100.820 1.00 53.40 O
ATOM 11 C2' U B1455 57.385 49.496 98.490 1.00 52.93 C
ATOM 12 O2' U B1455 56.367 50.341 98.944 1.00 53.28 O
ATOM 13 C1' U B1455 58.622 50.290 98.169 1.00 53.24 C
ATOM 14 N1 U B1455 58.654 50.832 96.796 1.00 53.12 N
ATOM 15 C2 U B1455 59.093 52.118 96.588 1.00 53.60 C
ATOM 16 O2 U B1455 59.425 52.847 97.510 1.00 54.13 O
ATOM 17 N3 U B1455 59.148 52.547 95.287 1.00 53.48 N
ATOM 18 C4 U B1455 58.844 51.823 94.182 1.00 52.93 C
ATOM 19 O4 U B1455 58.931 52.307 93.069 1.00 52.89 O
ATOM 20 C5 U B1455 58.443 50.503 94.479 1.00 52.47 C
ATOM 21 C6 U B1455 58.362 50.058 95.735 1.00 52.57 C
ATOM 22 P U B1456 57.070 48.405 101.993 1.00 56.07 P
ATOM 23 OP1 U B1456 56.977 49.381 103.133 1.00 56.72 O
ATOM 24 OP2 U B1456 57.723 47.083 102.217 1.00 55.70 O
ATOM 25 O5' U B1456 55.634 48.208 101.341 1.00 55.73 O
TER
Atoms:
C4: (55.425,44.014,98.210)
N3: (54.096,43.698,98.395)
OP1: (56.977,49.381,103.133)
OP2: (57.723,47.083,102.217)
C2: (53.146,44.546,98.949)
C1': (52.520,46.711,99.962)
C3': (53.092,47.002,102.224)
O5': (55.634,48.208,101.341)
O4': (53.048,48.017,100.087)
C5': (54.545,49.055,101.682)
P: (57.070,48.405,101.993)
C4': (53.228,48.347,101.500)
C2': (52.105,46.258,101.358)
O2': (50.796,46.738,101.609)
N1: (53.557,45.812,99.362)
O4: (56.186,43.182,97.699)
O2: (52.003,44.174,99.084)
C6: (54.876,46.161,99.199)
C5: (55.779,45.336,98.663)
O3': (52.655,47.140,103.553)
N3: (54.096,43.698,98.395)
OP1: (56.977,49.381,103.133)
OP2: (57.723,47.083,102.217)
C2: (53.146,44.546,98.949)
C1': (52.520,46.711,99.962)
C3': (53.092,47.002,102.224)
O5': (55.634,48.208,101.341)
O4': (53.048,48.017,100.087)
C5': (54.545,49.055,101.682)
P: (57.070,48.405,101.993)
C4': (53.228,48.347,101.500)
C2': (52.105,46.258,101.358)
O2': (50.796,46.738,101.609)
N1: (53.557,45.812,99.362)
O4: (56.186,43.182,97.699)
O2: (52.003,44.174,99.084)
C6: (54.876,46.161,99.199)
C5: (55.779,45.336,98.663)
O3': (52.655,47.140,103.553)
C4: (58.844,51.823,94.182)
N3: (59.148,52.547,95.287)
OP1: (60.762,46.573,95.736)
OP2: (58.939,44.822,96.014)
C2: (59.093,52.118,96.588)
C1': (58.622,50.290,98.169)
C3': (57.900,48.514,99.546)
O5': (58.831,47.001,97.242)
O4': (59.704,49.394,98.309)
C5': (59.582,47.022,98.429)
P: (59.357,46.257,95.959)
C4': (59.336,48.288,99.163)
C2': (57.385,49.496,98.490)
O2': (56.367,50.341,98.944)
N1: (58.654,50.832,96.796)
O4: (58.931,52.307,93.069)
O2: (59.425,52.847,97.510)
C6: (58.362,50.058,95.735)
C5: (58.443,50.503,94.479)
O3': (57.870,49.118,100.820)
N3: (59.148,52.547,95.287)
OP1: (60.762,46.573,95.736)
OP2: (58.939,44.822,96.014)
C2: (59.093,52.118,96.588)
C1': (58.622,50.290,98.169)
C3': (57.900,48.514,99.546)
O5': (58.831,47.001,97.242)
O4': (59.704,49.394,98.309)
C5': (59.582,47.022,98.429)
P: (59.357,46.257,95.959)
C4': (59.336,48.288,99.163)
C2': (57.385,49.496,98.490)
O2': (56.367,50.341,98.944)
N1: (58.654,50.832,96.796)
O4: (58.931,52.307,93.069)
O2: (59.425,52.847,97.510)
C6: (58.362,50.058,95.735)
C5: (58.443,50.503,94.479)
O3': (57.870,49.118,100.820)
Image (generated by PyMOL):